| translation | GO:0006412 | 230 | 0.983 | |
| ribonucleoprotein complex subunit organization | GO:0071826 | 152 | 0.885 | Yeast |
| regulation of cellular protein metabolic process | GO:0032268 | 232 | 0.868 | |
| ribosome biogenesis | GO:0042254 | 335 | 0.817 | Yeast |
| mrna splicing via spliceosome | GO:0000398 | 108 | 0.809 | Fly |
| mrna metabolic process | GO:0016071 | 269 | 0.727 | Fly |
| macromolecule catabolic process | GO:0009057 | 383 | 0.677 | |
| rna splicing via transesterification reactions with bulged adenosine as nucleophile | GO:0000377 | 109 | 0.638 | Fly |
| translational initiation | GO:0006413 | 56 | 0.622 | |
| cellular response to dna damage stimulus | GO:0006974 | 287 | 0.594 | Yeast Fly |
| rna splicing | GO:0008380 | 131 | 0.520 | Fly |
| positive regulation of cellular biosynthetic process | GO:0031328 | 336 | 0.396 | |
| ribosome assembly | GO:0042255 | 57 | 0.357 | Yeast |
| mrna processing | GO:0006397 | 185 | 0.346 | Fly |
| positive regulation of biosynthetic process | GO:0009891 | 336 | 0.343 | |
| positive regulation of gene expression | GO:0010628 | 321 | 0.340 | |
| heterocycle catabolic process | GO:0046700 | 494 | 0.314 | |
| regulation of biological quality | GO:0065008 | 391 | 0.314 | Worm |
| positive regulation of nitrogen compound metabolic process | GO:0051173 | 412 | 0.273 | |
| mitotic nuclear division | GO:0007067 | 131 | 0.264 | Fly |
| organic cyclic compound catabolic process | GO:1901361 | 499 | 0.259 | |
| cellular macromolecule catabolic process | GO:0044265 | 363 | 0.259 | |
| positive regulation of macromolecule metabolic process | GO:0010604 | 394 | 0.222 | |
| regulation of mrna splicing via spliceosome | GO:0048024 | 3 | 0.218 | Fly |
| microtubule organizing center organization | GO:0031023 | 33 | 0.216 | Fly |
| nuclear division | GO:0000280 | 263 | 0.213 | Fly |
| organophosphate metabolic process | GO:0019637 | 597 | 0.210 | |
| small molecule biosynthetic process | GO:0044283 | 258 | 0.207 | |
| regulation of protein metabolic process | GO:0051246 | 237 | 0.191 | |
| cellular amino acid metabolic process | GO:0006520 | 225 | 0.190 | |
| organelle assembly | GO:0070925 | 118 | 0.158 | Yeast |
| cellular component disassembly | GO:0022411 | 86 | 0.136 | |
| macromolecular complex disassembly | GO:0032984 | 80 | 0.124 | |
| positive regulation of cellular protein metabolic process | GO:0032270 | 89 | 0.122 | |
| positive regulation of macromolecule biosynthetic process | GO:0010557 | 325 | 0.119 | |
| nucleobase containing compound catabolic process | GO:0034655 | 479 | 0.113 | |
| negative regulation of macromolecule metabolic process | GO:0010605 | 375 | 0.111 | Yeast |
| cellular nitrogen compound catabolic process | GO:0044270 | 494 | 0.107 | |
| aromatic compound catabolic process | GO:0019439 | 491 | 0.103 | |
| protein localization to membrane | GO:0072657 | 102 | 0.100 | |
| organic acid metabolic process | GO:0006082 | 352 | 0.099 | |
| nucleic acid phosphodiester bond hydrolysis | GO:0090305 | 194 | 0.098 | |
| ribonucleoprotein complex assembly | GO:0022618 | 143 | 0.094 | Yeast |
| rna catabolic process | GO:0006401 | 118 | 0.093 | |
| nuclear transcribed mrna catabolic process | GO:0000956 | 89 | 0.089 | |
| phosphorylation | GO:0016310 | 291 | 0.087 | |
| establishment of protein localization to membrane | GO:0090150 | 99 | 0.083 | |
| posttranscriptional regulation of gene expression | GO:0010608 | 115 | 0.082 | |
| positive regulation of nucleobase containing compound metabolic process | GO:0045935 | 409 | 0.081 | |
| protein phosphorylation | GO:0006468 | 197 | 0.078 | |
| negative regulation of cellular protein metabolic process | GO:0032269 | 85 | 0.078 | |
| nucleobase containing small molecule metabolic process | GO:0055086 | 491 | 0.077 | |
| ribonucleoside monophosphate metabolic process | GO:0009161 | 265 | 0.076 | |
| ncrna processing | GO:0034470 | 330 | 0.073 | |
| protein complex assembly | GO:0006461 | 302 | 0.073 | |
| phospholipid biosynthetic process | GO:0008654 | 89 | 0.073 | |
| protein complex biogenesis | GO:0070271 | 314 | 0.069 | |
| intracellular protein transport | GO:0006886 | 319 | 0.068 | |
| organic acid biosynthetic process | GO:0016053 | 152 | 0.066 | |
| regulation of rna splicing | GO:0043484 | 3 | 0.066 | Fly |
| regulation of cellular component organization | GO:0051128 | 334 | 0.066 | |
| oxoacid metabolic process | GO:0043436 | 351 | 0.064 | |
| mrna catabolic process | GO:0006402 | 93 | 0.064 | |
| lipid metabolic process | GO:0006629 | 269 | 0.063 | |
| positive regulation of rna metabolic process | GO:0051254 | 294 | 0.061 | |
| organic anion transport | GO:0015711 | 114 | 0.060 | |
| protein modification by small protein conjugation or removal | GO:0070647 | 172 | 0.059 | |
| ribose phosphate biosynthetic process | GO:0046390 | 50 | 0.058 | |
| ion transport | GO:0006811 | 274 | 0.058 | |
| protein localization to organelle | GO:0033365 | 337 | 0.057 | |
| transmembrane transport | GO:0055085 | 349 | 0.053 | |
| regulation of translation | GO:0006417 | 89 | 0.053 | |
| regulation of organelle organization | GO:0033043 | 243 | 0.052 | |
| negative regulation of gene expression | GO:0010629 | 312 | 0.051 | |
| regulation of phosphate metabolic process | GO:0019220 | 230 | 0.049 | |
| lipid biosynthetic process | GO:0008610 | 170 | 0.048 | |
| mitotic cell cycle process | GO:1903047 | 294 | 0.045 | Fly |
| purine nucleoside monophosphate metabolic process | GO:0009126 | 262 | 0.045 | |
| nuclear transcribed mrna catabolic process nonsense mediated decay | GO:0000184 | 15 | 0.044 | |
| negative regulation of nucleobase containing compound metabolic process | GO:0045934 | 295 | 0.044 | Yeast |
| sulfur compound metabolic process | GO:0006790 | 95 | 0.043 | |
| cellular homeostasis | GO:0019725 | 138 | 0.043 | |
| negative regulation of protein metabolic process | GO:0051248 | 85 | 0.041 | |
| anion transport | GO:0006820 | 145 | 0.039 | |
| positive regulation of translation | GO:0045727 | 34 | 0.038 | |
| response to organic cyclic compound | GO:0014070 | 1 | 0.036 | |
| regulation of mrna metabolic process | GO:1903311 | 17 | 0.036 | Fly |
| regulation of protein modification process | GO:0031399 | 110 | 0.036 | |
| protein transport | GO:0015031 | 345 | 0.035 | |
| regulation of nuclear division | GO:0051783 | 103 | 0.035 | |
| mitotic cell cycle phase transition | GO:0044772 | 141 | 0.034 | |
| cytoplasmic translation | GO:0002181 | 65 | 0.034 | |
| carboxylic acid biosynthetic process | GO:0046394 | 152 | 0.034 | |
| ribosomal small subunit biogenesis | GO:0042274 | 124 | 0.033 | |
| positive regulation of transcription dna templated | GO:0045893 | 286 | 0.033 | |
| ribonucleoside triphosphate metabolic process | GO:0009199 | 356 | 0.032 | |
| establishment of protein localization | GO:0045184 | 367 | 0.032 | |
| phospholipid metabolic process | GO:0006644 | 125 | 0.032 | |
| cellular protein complex disassembly | GO:0043624 | 42 | 0.032 | |
| positive regulation of cellular component organization | GO:0051130 | 116 | 0.031 | |
| ribosomal large subunit biogenesis | GO:0042273 | 98 | 0.030 | Yeast |
| anatomical structure homeostasis | GO:0060249 | 74 | 0.030 | |
| positive regulation of protein metabolic process | GO:0051247 | 93 | 0.029 | |
| establishment of protein localization to organelle | GO:0072594 | 278 | 0.028 | |
| cytoskeleton organization | GO:0007010 | 230 | 0.028 | Fly |
| lipid localization | GO:0010876 | 60 | 0.028 | Worm |
| cellular chemical homeostasis | GO:0055082 | 123 | 0.027 | |
| regulation of phosphorylation | GO:0042325 | 86 | 0.027 | |
| dna conformation change | GO:0071103 | 98 | 0.027 | Yeast |
| nucleoside triphosphate metabolic process | GO:0009141 | 364 | 0.027 | |
| nucleoside metabolic process | GO:0009116 | 394 | 0.026 | |
| nucleoside phosphate metabolic process | GO:0006753 | 458 | 0.025 | |
| organic acid transport | GO:0015849 | 77 | 0.025 | |
| protein complex disassembly | GO:0043241 | 70 | 0.024 | |
| positive regulation of phosphorus metabolic process | GO:0010562 | 147 | 0.023 | |
| chemical homeostasis | GO:0048878 | 137 | 0.022 | |
| regulation of catabolic process | GO:0009894 | 199 | 0.022 | |
| ribosomal large subunit assembly | GO:0000027 | 35 | 0.022 | Yeast |
| purine ribonucleotide catabolic process | GO:0009154 | 327 | 0.022 | |
| rrna metabolic process | GO:0016072 | 244 | 0.022 | |
| negative regulation of cellular biosynthetic process | GO:0031327 | 312 | 0.021 | |
| atp metabolic process | GO:0046034 | 251 | 0.021 | |
| nucleoside biosynthetic process | GO:0009163 | 38 | 0.021 | |
| ribonucleoside metabolic process | GO:0009119 | 389 | 0.021 | |
| purine ribonucleoside monophosphate catabolic process | GO:0009169 | 224 | 0.021 | |
| translational elongation | GO:0006414 | 32 | 0.021 | |
| cellular lipid metabolic process | GO:0044255 | 229 | 0.021 | |
| rrna containing ribonucleoprotein complex export from nucleus | GO:0071428 | 46 | 0.021 | |
| purine nucleoside monophosphate catabolic process | GO:0009128 | 224 | 0.020 | |
| positive regulation of rna biosynthetic process | GO:1902680 | 286 | 0.020 | |
| nucleoside monophosphate metabolic process | GO:0009123 | 267 | 0.020 | |
| homeostatic process | GO:0042592 | 227 | 0.020 | |
| glycerolipid biosynthetic process | GO:0045017 | 71 | 0.020 | |
| multi organism process | GO:0051704 | 233 | 0.020 | Fly |
| regulation of protein phosphorylation | GO:0001932 | 75 | 0.019 | |
| purine ribonucleoside monophosphate metabolic process | GO:0009167 | 262 | 0.019 | |
| cellular amine metabolic process | GO:0044106 | 51 | 0.019 | |
| positive regulation of nucleic acid templated transcription | GO:1903508 | 286 | 0.018 | |
| rrna processing | GO:0006364 | 227 | 0.018 | |
| organophosphate catabolic process | GO:0046434 | 338 | 0.018 | |
| single organism catabolic process | GO:0044712 | 619 | 0.018 | |
| regulation of protein serine threonine kinase activity | GO:0071900 | 41 | 0.018 | |
| cellular cation homeostasis | GO:0030003 | 100 | 0.018 | |
| regulation of transcription from rna polymerase ii promoter | GO:0006357 | 394 | 0.018 | |
| purine nucleoside catabolic process | GO:0006152 | 330 | 0.017 | |
| carboxylic acid transport | GO:0046942 | 74 | 0.017 | |
| alpha amino acid biosynthetic process | GO:1901607 | 91 | 0.017 | |
| carboxylic acid catabolic process | GO:0046395 | 71 | 0.017 | |
| organonitrogen compound biosynthetic process | GO:1901566 | 314 | 0.017 | |
| carboxylic acid metabolic process | GO:0019752 | 338 | 0.017 | |
| developmental process involved in reproduction | GO:0003006 | 159 | 0.017 | Fly |
| mitotic spindle organization | GO:0007052 | 30 | 0.016 | Fly |
| regulation of signal transduction | GO:0009966 | 114 | 0.016 | |
| nucleoside triphosphate biosynthetic process | GO:0009142 | 22 | 0.015 | |
| monocarboxylic acid metabolic process | GO:0032787 | 122 | 0.015 | |
| organophosphate biosynthetic process | GO:0090407 | 182 | 0.015 | |
| microtubule based process | GO:0007017 | 117 | 0.015 | Fly |
| spindle elongation | GO:0051231 | 14 | 0.015 | Fly |
| response to chemical | GO:0042221 | 390 | 0.015 | |
| ribonucleotide catabolic process | GO:0009261 | 327 | 0.014 | |
| amine metabolic process | GO:0009308 | 51 | 0.014 | |
| negative regulation of biosynthetic process | GO:0009890 | 312 | 0.014 | |
| negative regulation of cellular macromolecule biosynthetic process | GO:2000113 | 289 | 0.014 | |
| regulation of protein kinase activity | GO:0045859 | 67 | 0.014 | |
| telomere organization | GO:0032200 | 75 | 0.014 | |
| cellular response to chemical stimulus | GO:0070887 | 315 | 0.014 | |
| positive regulation of mrna processing | GO:0050685 | 3 | 0.014 | |
| negative regulation of organelle organization | GO:0010639 | 103 | 0.014 | |
| meiotic cell cycle process | GO:1903046 | 229 | 0.014 | |
| chromatin organization | GO:0006325 | 242 | 0.014 | |
| multi organism reproductive process | GO:0044703 | 216 | 0.013 | Fly |
| regulation of catalytic activity | GO:0050790 | 307 | 0.013 | |
| alcohol biosynthetic process | GO:0046165 | 75 | 0.013 | |
| organic hydroxy compound metabolic process | GO:1901615 | 125 | 0.013 | |
| protein catabolic process | GO:0030163 | 221 | 0.013 | |
| purine nucleotide metabolic process | GO:0006163 | 376 | 0.013 | |
| positive regulation of phosphate metabolic process | GO:0045937 | 147 | 0.013 | |
| reproductive process | GO:0022414 | 248 | 0.013 | Fly |
| positive regulation of purine nucleotide metabolic process | GO:1900544 | 100 | 0.013 | |
| positive regulation of transcription from rna polymerase ii promoter | GO:0045944 | 252 | 0.012 | |
| nucleocytoplasmic transport | GO:0006913 | 163 | 0.012 | |
| regulation of nucleoside metabolic process | GO:0009118 | 106 | 0.012 | |
| glycosyl compound metabolic process | GO:1901657 | 398 | 0.012 | |
| plasma membrane organization | GO:0007009 | 21 | 0.012 | |
| glycosyl compound biosynthetic process | GO:1901659 | 42 | 0.012 | |
| nucleoside monophosphate catabolic process | GO:0009125 | 224 | 0.012 | |
| regulation of cell division | GO:0051302 | 113 | 0.012 | |
| energy derivation by oxidation of organic compounds | GO:0015980 | 125 | 0.012 | |
| regulation of response to stimulus | GO:0048583 | 157 | 0.012 | |
| purine ribonucleoside catabolic process | GO:0046130 | 330 | 0.011 | |
| rna dependent dna replication | GO:0006278 | 25 | 0.011 | |
| small molecule catabolic process | GO:0044282 | 88 | 0.011 | |
| nuclear transcribed mrna catabolic process deadenylation dependent decay | GO:0000288 | 44 | 0.011 | |
| positive regulation of cell death | GO:0010942 | 3 | 0.011 | |
| regulation of gene silencing | GO:0060968 | 41 | 0.011 | |
| positive regulation of molecular function | GO:0044093 | 185 | 0.011 | |
| positive regulation of cellular component biogenesis | GO:0044089 | 45 | 0.011 | |
| modification dependent protein catabolic process | GO:0019941 | 181 | 0.011 | |
| regulation of dna metabolic process | GO:0051052 | 100 | 0.011 | Yeast |
| protein targeting to nucleus | GO:0044744 | 57 | 0.011 | |
| ribonucleoside triphosphate biosynthetic process | GO:0009201 | 19 | 0.010 | |
| proteolysis involved in cellular protein catabolic process | GO:0051603 | 198 | 0.010 | |
| positive regulation of apoptotic process | GO:0043065 | 3 | 0.010 | |
| mitotic cell cycle checkpoint | GO:0007093 | 56 | 0.010 | |
| positive regulation of nucleoside metabolic process | GO:0045979 | 97 | 0.010 | |
| negative regulation of cellular metabolic process | GO:0031324 | 407 | 0.010 | Yeast |
| protein targeting to membrane | GO:0006612 | 52 | 0.010 | |
