| nucleoside phosphate metabolic process | GO:0006753 | 458 | 0.488 | |
| organophosphate metabolic process | GO:0019637 | 597 | 0.359 | |
| aromatic compound catabolic process | GO:0019439 | 491 | 0.272 | |
| organic cyclic compound catabolic process | GO:1901361 | 499 | 0.265 | |
| nucleobase containing compound catabolic process | GO:0034655 | 479 | 0.248 | |
| energy derivation by oxidation of organic compounds | GO:0015980 | 125 | 0.238 | |
| heterocycle catabolic process | GO:0046700 | 494 | 0.191 | |
| cellular nitrogen compound catabolic process | GO:0044270 | 494 | 0.157 | |
| nucleoside metabolic process | GO:0009116 | 394 | 0.139 | |
| alpha amino acid metabolic process | GO:1901605 | 124 | 0.132 | |
| organonitrogen compound catabolic process | GO:1901565 | 404 | 0.120 | |
| nuclear migration | GO:0007097 | 22 | 0.119 | Yeast |
| generation of precursor metabolites and energy | GO:0006091 | 147 | 0.114 | |
| nucleobase containing small molecule metabolic process | GO:0055086 | 491 | 0.100 | |
| pyrimidine containing compound metabolic process | GO:0072527 | 37 | 0.099 | |
| cellular protein complex assembly | GO:0043623 | 209 | 0.087 | |
| positive regulation of cellular biosynthetic process | GO:0031328 | 336 | 0.087 | |
| maintenance of location | GO:0051235 | 66 | 0.078 | |
| glycosyl compound metabolic process | GO:1901657 | 398 | 0.077 | |
| establishment of protein localization | GO:0045184 | 367 | 0.076 | |
| cellular macromolecule catabolic process | GO:0044265 | 363 | 0.076 | |
| maintenance of location in cell | GO:0051651 | 58 | 0.076 | |
| carbohydrate derivative metabolic process | GO:1901135 | 549 | 0.072 | |
| cellular amino acid catabolic process | GO:0009063 | 48 | 0.065 | |
| single organism catabolic process | GO:0044712 | 619 | 0.064 | |
| ribose phosphate metabolic process | GO:0019693 | 384 | 0.063 | |
| regulation of signaling | GO:0023051 | 119 | 0.062 | |
| regulation of signal transduction | GO:0009966 | 114 | 0.058 | |
| monosaccharide metabolic process | GO:0005996 | 83 | 0.057 | |
| glucose metabolic process | GO:0006006 | 65 | 0.057 | |
| regulation of phosphate metabolic process | GO:0019220 | 230 | 0.057 | |
| purine containing compound metabolic process | GO:0072521 | 400 | 0.055 | |
| positive regulation of nitrogen compound metabolic process | GO:0051173 | 412 | 0.053 | |
| cofactor metabolic process | GO:0051186 | 126 | 0.053 | |
| protein transport | GO:0015031 | 345 | 0.053 | |
| pyridine nucleotide metabolic process | GO:0019362 | 45 | 0.052 | |
| purine ribonucleoside triphosphate metabolic process | GO:0009205 | 354 | 0.050 | |
| protein localization to organelle | GO:0033365 | 337 | 0.049 | |
| regulation of phosphorus metabolic process | GO:0051174 | 230 | 0.049 | |
| regulation of protein metabolic process | GO:0051246 | 237 | 0.049 | |
| positive regulation of biosynthetic process | GO:0009891 | 336 | 0.048 | |
| organelle localization | GO:0051640 | 128 | 0.048 | Yeast |
| regulation of cellular component organization | GO:0051128 | 334 | 0.047 | |
| negative regulation of organelle organization | GO:0010639 | 103 | 0.047 | |
| ribonucleoside biosynthetic process | GO:0042455 | 37 | 0.046 | |
| nucleoside phosphate biosynthetic process | GO:1901293 | 80 | 0.046 | |
| cofactor biosynthetic process | GO:0051188 | 80 | 0.046 | |
| regulation of biological quality | GO:0065008 | 391 | 0.045 | |
| intracellular protein transport | GO:0006886 | 319 | 0.045 | |
| mitotic cell cycle process | GO:1903047 | 294 | 0.045 | Yeast |
| carbohydrate derivative biosynthetic process | GO:1901137 | 181 | 0.044 | |
| purine ribonucleotide catabolic process | GO:0009154 | 327 | 0.044 | |
| organic acid metabolic process | GO:0006082 | 352 | 0.043 | |
| nucleoside catabolic process | GO:0009164 | 335 | 0.043 | |
| ribonucleotide metabolic process | GO:0009259 | 377 | 0.043 | |
| ribonucleoside metabolic process | GO:0009119 | 389 | 0.042 | |
| maintenance of protein location in cell | GO:0032507 | 50 | 0.042 | |
| response to abiotic stimulus | GO:0009628 | 159 | 0.042 | |
| cytoskeleton dependent intracellular transport | GO:0030705 | 18 | 0.042 | Yeast |
| mitochondrion organization | GO:0007005 | 261 | 0.041 | |
| cellular amino acid metabolic process | GO:0006520 | 225 | 0.041 | |
| negative regulation of nitrogen compound metabolic process | GO:0051172 | 300 | 0.040 | |
| negative regulation of nucleobase containing compound metabolic process | GO:0045934 | 295 | 0.039 | |
| macromolecule catabolic process | GO:0009057 | 383 | 0.038 | |
| glycerolipid metabolic process | GO:0046486 | 108 | 0.038 | |
| coenzyme metabolic process | GO:0006732 | 104 | 0.037 | |
| endomembrane system organization | GO:0010256 | 74 | 0.037 | |
| glycosyl compound catabolic process | GO:1901658 | 335 | 0.036 | |
| purine nucleoside metabolic process | GO:0042278 | 380 | 0.036 | |
| negative regulation of macromolecule metabolic process | GO:0010605 | 375 | 0.036 | |
| glycosyl compound biosynthetic process | GO:1901659 | 42 | 0.036 | |
| translation | GO:0006412 | 230 | 0.035 | |
| posttranscriptional regulation of gene expression | GO:0010608 | 115 | 0.035 | |
| carbohydrate derivative catabolic process | GO:1901136 | 339 | 0.035 | |
| response to chemical | GO:0042221 | 390 | 0.034 | |
| oxoacid metabolic process | GO:0043436 | 351 | 0.034 | |
| nicotinamide nucleotide metabolic process | GO:0046496 | 44 | 0.034 | |
| nucleotide metabolic process | GO:0009117 | 453 | 0.034 | |
| protein localization to endoplasmic reticulum | GO:0070972 | 47 | 0.034 | |
| nucleoside triphosphate metabolic process | GO:0009141 | 364 | 0.033 | |
| ribonucleoside catabolic process | GO:0042454 | 332 | 0.033 | |
| purine ribonucleotide metabolic process | GO:0009150 | 372 | 0.033 | |
| nucleotide catabolic process | GO:0009166 | 330 | 0.033 | |
| monosaccharide catabolic process | GO:0046365 | 28 | 0.033 | |
| organelle fission | GO:0048285 | 272 | 0.033 | Yeast |
| carboxylic acid metabolic process | GO:0019752 | 338 | 0.032 | |
| nucleus localization | GO:0051647 | 22 | 0.031 | Yeast |
| single organism carbohydrate metabolic process | GO:0044723 | 237 | 0.031 | |
| regulation of response to stimulus | GO:0048583 | 157 | 0.030 | |
| purine nucleotide catabolic process | GO:0006195 | 328 | 0.030 | |
| single organism signaling | GO:0044700 | 208 | 0.029 | |
| nucleoside phosphate catabolic process | GO:1901292 | 331 | 0.029 | |
| protein polymerization | GO:0051258 | 51 | 0.029 | |
| monocarboxylic acid metabolic process | GO:0032787 | 122 | 0.029 | |
| positive regulation of nucleobase containing compound metabolic process | GO:0045935 | 409 | 0.029 | |
| maintenance of protein location | GO:0045185 | 53 | 0.029 | |
| alpha amino acid biosynthetic process | GO:1901607 | 91 | 0.028 | |
| purine nucleotide metabolic process | GO:0006163 | 376 | 0.028 | |
| organophosphate biosynthetic process | GO:0090407 | 182 | 0.028 | |
| sulfur compound biosynthetic process | GO:0044272 | 53 | 0.028 | |
| cell communication | GO:0007154 | 345 | 0.028 | |
| regulation of cell cycle process | GO:0010564 | 150 | 0.027 | |
| tubulin complex biogenesis | GO:0072668 | 11 | 0.027 | |
| hexose metabolic process | GO:0019318 | 78 | 0.026 | |
| microtubule polymerization | GO:0046785 | 30 | 0.026 | |
| positive regulation of transcription dna templated | GO:0045893 | 286 | 0.025 | |
| microtubule based transport | GO:0010970 | 18 | 0.025 | Yeast |
| regulation of organelle organization | GO:0033043 | 243 | 0.025 | |
| establishment of organelle localization | GO:0051656 | 96 | 0.025 | Yeast |
| single organism developmental process | GO:0044767 | 258 | 0.025 | |
| positive regulation of phosphorus metabolic process | GO:0010562 | 147 | 0.024 | |
| protein complex biogenesis | GO:0070271 | 314 | 0.024 | |
| purine containing compound catabolic process | GO:0072523 | 332 | 0.024 | |
| establishment of nucleus localization | GO:0040023 | 22 | 0.024 | Yeast |
| negative regulation of cellular component organization | GO:0051129 | 109 | 0.024 | |
| regulation of translation | GO:0006417 | 89 | 0.024 | |
| mitotic cell cycle | GO:0000278 | 306 | 0.023 | Yeast |
| carbohydrate metabolic process | GO:0005975 | 252 | 0.023 | |
| ribonucleotide catabolic process | GO:0009261 | 327 | 0.023 | |
| cellular response to chemical stimulus | GO:0070887 | 315 | 0.023 | |
| chemical homeostasis | GO:0048878 | 137 | 0.023 | |
| modification dependent protein catabolic process | GO:0019941 | 181 | 0.023 | |
| ribonucleoside triphosphate catabolic process | GO:0009203 | 327 | 0.022 | |
| cell wall organization or biogenesis | GO:0071554 | 190 | 0.022 | |
| positive regulation of nucleic acid templated transcription | GO:1903508 | 286 | 0.021 | |
| protein import into nucleus | GO:0006606 | 55 | 0.021 | |
| purine nucleoside catabolic process | GO:0006152 | 330 | 0.021 | |
| transmembrane transport | GO:0055085 | 349 | 0.020 | |
| purine nucleoside triphosphate catabolic process | GO:0009146 | 329 | 0.020 | |
| nucleoside triphosphate catabolic process | GO:0009143 | 329 | 0.020 | |
| ion transport | GO:0006811 | 274 | 0.020 | |
| atp metabolic process | GO:0046034 | 251 | 0.020 | |
| guanosine containing compound metabolic process | GO:1901068 | 111 | 0.020 | |
| regulation of transcription from rna polymerase ii promoter | GO:0006357 | 394 | 0.019 | |
| response to hypoxia | GO:0001666 | 4 | 0.019 | |
| purine ribonucleoside triphosphate catabolic process | GO:0009207 | 327 | 0.019 | |
| modification dependent macromolecule catabolic process | GO:0043632 | 203 | 0.019 | |
| negative regulation of nuclear division | GO:0051784 | 62 | 0.019 | |
| vesicle mediated transport | GO:0016192 | 335 | 0.019 | |
| mitotic nuclear division | GO:0007067 | 131 | 0.019 | Yeast |
| cellular response to oxidative stress | GO:0034599 | 94 | 0.019 | |
| regulation of catalytic activity | GO:0050790 | 307 | 0.019 | |
| sulfur compound metabolic process | GO:0006790 | 95 | 0.019 | |
| organophosphate catabolic process | GO:0046434 | 338 | 0.018 | |
| phospholipid metabolic process | GO:0006644 | 125 | 0.018 | |
| microtubule polymerization or depolymerization | GO:0031109 | 36 | 0.018 | |
| cation transport | GO:0006812 | 166 | 0.018 | |
| ribonucleoside triphosphate metabolic process | GO:0009199 | 356 | 0.018 | |
| polysaccharide metabolic process | GO:0005976 | 60 | 0.018 | |
| regulation of cellular localization | GO:0060341 | 50 | 0.018 | |
| alcohol metabolic process | GO:0006066 | 112 | 0.018 | |
| protein glycosylation | GO:0006486 | 57 | 0.018 | |
| negative regulation of cell division | GO:0051782 | 66 | 0.018 | |
| nucleoside monophosphate metabolic process | GO:0009123 | 267 | 0.018 | |
| ribonucleoside monophosphate metabolic process | GO:0009161 | 265 | 0.017 | |
| carbohydrate catabolic process | GO:0016052 | 77 | 0.017 | |
| gtp catabolic process | GO:0006184 | 107 | 0.017 | |
| positive regulation of rna metabolic process | GO:0051254 | 294 | 0.017 | |
| nucleotide biosynthetic process | GO:0009165 | 79 | 0.016 | |
| regulation of localization | GO:0032879 | 127 | 0.016 | |
| response to oxidative stress | GO:0006979 | 99 | 0.016 | |
| nucleocytoplasmic transport | GO:0006913 | 163 | 0.016 | |
| negative regulation of signal transduction | GO:0009968 | 30 | 0.016 | |
| cellular amino acid biosynthetic process | GO:0008652 | 118 | 0.016 | |
| oxidoreduction coenzyme metabolic process | GO:0006733 | 58 | 0.016 | |
| proteolysis involved in cellular protein catabolic process | GO:0051603 | 198 | 0.016 | |
| regulation of mitotic cell cycle phase transition | GO:1901990 | 68 | 0.016 | |
| positive regulation of phosphate metabolic process | GO:0045937 | 147 | 0.015 | |
| negative regulation of cell communication | GO:0010648 | 33 | 0.015 | |
| ubiquitin dependent protein catabolic process | GO:0006511 | 181 | 0.015 | |
| negative regulation of cellular macromolecule biosynthetic process | GO:2000113 | 289 | 0.015 | |
| protein modification by small protein conjugation or removal | GO:0070647 | 172 | 0.015 | |
| positive regulation of gene expression | GO:0010628 | 321 | 0.015 | |
| protein targeting to membrane | GO:0006612 | 52 | 0.015 | |
| negative regulation of cellular metabolic process | GO:0031324 | 407 | 0.015 | |
| purine ribonucleoside metabolic process | GO:0046128 | 380 | 0.015 | |
| organic acid biosynthetic process | GO:0016053 | 152 | 0.015 | |
| organelle transport along microtubule | GO:0072384 | 18 | 0.015 | Yeast |
| purine nucleoside triphosphate metabolic process | GO:0009144 | 356 | 0.014 | |
| purine ribonucleoside catabolic process | GO:0046130 | 330 | 0.014 | |
| protein complex assembly | GO:0006461 | 302 | 0.014 | |
| lipid metabolic process | GO:0006629 | 269 | 0.014 | |
| regulation of cellular protein metabolic process | GO:0032268 | 232 | 0.014 | |
| regulation of gene expression epigenetic | GO:0040029 | 147 | 0.014 | |
| nuclear transcribed mrna catabolic process | GO:0000956 | 89 | 0.014 | |
| positive regulation of macromolecule biosynthetic process | GO:0010557 | 325 | 0.014 | |
| negative regulation of macromolecule biosynthetic process | GO:0010558 | 291 | 0.014 | |
| regulation of mitotic cell cycle | GO:0007346 | 107 | 0.014 | |
| protein catabolic process | GO:0030163 | 221 | 0.014 | |
| mrna catabolic process | GO:0006402 | 93 | 0.014 | |
| regulation of intracellular transport | GO:0032386 | 26 | 0.014 | |
| positive regulation of intracellular protein transport | GO:0090316 | 3 | 0.014 | |
| regulation of purine nucleotide metabolic process | GO:1900542 | 109 | 0.013 | |
| pyrimidine containing compound biosynthetic process | GO:0072528 | 33 | 0.013 | |
| gtp metabolic process | GO:0046039 | 107 | 0.013 | |
| organonitrogen compound biosynthetic process | GO:1901566 | 314 | 0.013 | |
| oxidation reduction process | GO:0055114 | 353 | 0.013 | |
| negative regulation of gene expression | GO:0010629 | 312 | 0.013 | |
| positive regulation of molecular function | GO:0044093 | 185 | 0.013 | |
| positive regulation of macromolecule metabolic process | GO:0010604 | 394 | 0.013 | |
| cellular respiration | GO:0045333 | 82 | 0.013 | |
| carbohydrate biosynthetic process | GO:0016051 | 82 | 0.013 | |
| protein targeting | GO:0006605 | 272 | 0.013 | |
| regulation of nucleotide metabolic process | GO:0006140 | 110 | 0.013 | |
| establishment of protein localization to membrane | GO:0090150 | 99 | 0.013 | |
| atp catabolic process | GO:0006200 | 224 | 0.013 | |
| nuclear division | GO:0000280 | 263 | 0.013 | Yeast |
| negative regulation of mitotic cell cycle | GO:0045930 | 63 | 0.013 | |
| mitotic spindle organization in nucleus | GO:0030472 | 9 | 0.012 | |
| regulation of microtubule cytoskeleton organization | GO:0070507 | 32 | 0.012 | |
| negative regulation of signaling | GO:0023057 | 30 | 0.012 | |
| nuclear transport | GO:0051169 | 165 | 0.012 | |
| proteolysis | GO:0006508 | 268 | 0.012 | |
| mitotic spindle organization | GO:0007052 | 30 | 0.012 | |
| regulation of cell cycle phase transition | GO:1901987 | 70 | 0.012 | |
| carboxylic acid catabolic process | GO:0046395 | 71 | 0.012 | |
| regulation of protein localization | GO:0032880 | 62 | 0.012 | |
| cellular lipid metabolic process | GO:0044255 | 229 | 0.012 | |
| regulation of nucleotide catabolic process | GO:0030811 | 106 | 0.012 | |
| cellular component movement | GO:0006928 | 20 | 0.012 | Yeast |
| regulation of cell communication | GO:0010646 | 124 | 0.012 | |
| regulation of cellular catabolic process | GO:0031329 | 195 | 0.012 | |
| nuclear import | GO:0051170 | 57 | 0.011 | |
| purine nucleoside monophosphate catabolic process | GO:0009128 | 224 | 0.011 | |
| multi organism process | GO:0051704 | 233 | 0.011 | |
| cellular protein catabolic process | GO:0044257 | 213 | 0.011 | |
| replicative cell aging | GO:0001302 | 46 | 0.011 | |
| membrane organization | GO:0061024 | 276 | 0.011 | |
| positive regulation of secretion | GO:0051047 | 2 | 0.011 | |
| microtubule based movement | GO:0007018 | 18 | 0.011 | Yeast |
| endoplasmic reticulum organization | GO:0007029 | 30 | 0.011 | |
| single organism membrane organization | GO:0044802 | 275 | 0.011 | |
| meiotic nuclear division | GO:0007126 | 163 | 0.011 | Yeast |
| positive regulation of cytoplasmic transport | GO:1903651 | 4 | 0.011 | |
| negative regulation of protein metabolic process | GO:0051248 | 85 | 0.011 | |
| anion transport | GO:0006820 | 145 | 0.010 | |
| regulation of protein complex assembly | GO:0043254 | 77 | 0.010 | |
| aspartate family amino acid metabolic process | GO:0009066 | 40 | 0.010 | |
| positive regulation of rna biosynthetic process | GO:1902680 | 286 | 0.010 | |
| ras protein signal transduction | GO:0007265 | 29 | 0.010 | |
| organic acid catabolic process | GO:0016054 | 71 | 0.010 | |
| proteasomal protein catabolic process | GO:0010498 | 141 | 0.010 | |
| regulation of rna splicing | GO:0043484 | 3 | 0.010 | |
| macromolecule glycosylation | GO:0043413 | 57 | 0.010 | |
| sexual reproduction | GO:0019953 | 216 | 0.010 | |
