| proteolysis | GO:0006508 | 268 | 0.991 | |
| protein catabolic process | GO:0030163 | 221 | 0.976 | |
| proteasomal protein catabolic process | GO:0010498 | 141 | 0.951 | |
| proteolysis involved in cellular protein catabolic process | GO:0051603 | 198 | 0.948 | |
| modification dependent protein catabolic process | GO:0019941 | 181 | 0.943 | |
| er associated ubiquitin dependent protein catabolic process | GO:0030433 | 46 | 0.920 | |
| macromolecule catabolic process | GO:0009057 | 383 | 0.896 | |
| cellular protein catabolic process | GO:0044257 | 213 | 0.895 | |
| cellular macromolecule catabolic process | GO:0044265 | 363 | 0.773 | |
| signaling | GO:0023052 | 208 | 0.626 | |
| modification dependent macromolecule catabolic process | GO:0043632 | 203 | 0.599 | |
| proteasome mediated ubiquitin dependent protein catabolic process | GO:0043161 | 137 | 0.569 | |
| cell communication | GO:0007154 | 345 | 0.556 | |
| intracellular protein transport | GO:0006886 | 319 | 0.525 | |
| ubiquitin dependent protein catabolic process | GO:0006511 | 181 | 0.520 | |
| single organism signaling | GO:0044700 | 208 | 0.396 | |
| positive regulation of rna metabolic process | GO:0051254 | 294 | 0.305 | |
| response to chemical | GO:0042221 | 390 | 0.301 | |
| regulation of biological quality | GO:0065008 | 391 | 0.297 | |
| establishment of protein localization | GO:0045184 | 367 | 0.272 | |
| cellular response to organic substance | GO:0071310 | 159 | 0.243 | |
| protein transport | GO:0015031 | 345 | 0.230 | |
| protein modification by small protein conjugation or removal | GO:0070647 | 172 | 0.227 | |
| signal transduction | GO:0007165 | 208 | 0.223 | |
| carbohydrate derivative metabolic process | GO:1901135 | 549 | 0.173 | |
| response to organic substance | GO:0010033 | 182 | 0.167 | |
| regulation of cellular component organization | GO:0051128 | 334 | 0.152 | |
| nucleobase containing small molecule metabolic process | GO:0055086 | 491 | 0.151 | |
| positive regulation of nitrogen compound metabolic process | GO:0051173 | 412 | 0.150 | |
| multi organism process | GO:0051704 | 233 | 0.148 | |
| protein modification by small protein conjugation | GO:0032446 | 144 | 0.132 | |
| protein complex assembly | GO:0006461 | 302 | 0.125 | |
| rna splicing | GO:0008380 | 131 | 0.121 | |
| multi organism reproductive process | GO:0044703 | 216 | 0.108 | |
| nucleoside phosphate metabolic process | GO:0006753 | 458 | 0.099 | |
| reproductive process | GO:0022414 | 248 | 0.097 | |
| positive regulation of biosynthetic process | GO:0009891 | 336 | 0.092 | |
| positive regulation of rna biosynthetic process | GO:1902680 | 286 | 0.078 | |
| sexual reproduction | GO:0019953 | 216 | 0.077 | |
| organonitrogen compound biosynthetic process | GO:1901566 | 314 | 0.076 | |
| negative regulation of cellular biosynthetic process | GO:0031327 | 312 | 0.071 | |
| purine nucleoside monophosphate metabolic process | GO:0009126 | 262 | 0.068 | |
| positive regulation of nucleobase containing compound metabolic process | GO:0045935 | 409 | 0.060 | |
| ribose phosphate metabolic process | GO:0019693 | 384 | 0.059 | |
| atp metabolic process | GO:0046034 | 251 | 0.058 | |
| purine ribonucleoside monophosphate metabolic process | GO:0009167 | 262 | 0.056 | |
| protein ubiquitination | GO:0016567 | 118 | 0.053 | |
| mrna metabolic process | GO:0016071 | 269 | 0.050 | |
| regulation of cellular component biogenesis | GO:0044087 | 112 | 0.046 | |
| nucleoside metabolic process | GO:0009116 | 394 | 0.045 | |
| cellular response to chemical stimulus | GO:0070887 | 315 | 0.045 | |
| response to topologically incorrect protein | GO:0035966 | 38 | 0.041 | |
| protein complex biogenesis | GO:0070271 | 314 | 0.040 | |
| positive regulation of cellular biosynthetic process | GO:0031328 | 336 | 0.040 | |
| negative regulation of cellular metabolic process | GO:0031324 | 407 | 0.039 | |
| regulation of organelle organization | GO:0033043 | 243 | 0.038 | |
| positive regulation of nucleic acid templated transcription | GO:1903508 | 286 | 0.038 | |
| nucleobase containing compound catabolic process | GO:0034655 | 479 | 0.037 | |
| cellular nitrogen compound catabolic process | GO:0044270 | 494 | 0.036 | |
| cellular component disassembly | GO:0022411 | 86 | 0.036 | |
| rna splicing via transesterification reactions | GO:0000375 | 118 | 0.035 | |
| purine nucleotide catabolic process | GO:0006195 | 328 | 0.035 | |
| regulation of intracellular signal transduction | GO:1902531 | 78 | 0.035 | |
| regulation of signal transduction | GO:0009966 | 114 | 0.034 | |
| negative regulation of rna biosynthetic process | GO:1902679 | 260 | 0.032 | |
| positive regulation of macromolecule biosynthetic process | GO:0010557 | 325 | 0.032 | |
| ribonucleoside metabolic process | GO:0009119 | 389 | 0.032 | |
| ribonucleotide metabolic process | GO:0009259 | 377 | 0.031 | |
| glycosyl compound catabolic process | GO:1901658 | 335 | 0.031 | |
| posttranscriptional regulation of gene expression | GO:0010608 | 115 | 0.031 | |
| meiotic cell cycle | GO:0051321 | 272 | 0.030 | |
| organophosphate metabolic process | GO:0019637 | 597 | 0.029 | |
| small molecule biosynthetic process | GO:0044283 | 258 | 0.028 | |
| nucleotide metabolic process | GO:0009117 | 453 | 0.026 | |
| positive regulation of gene expression | GO:0010628 | 321 | 0.024 | |
| cellular developmental process | GO:0048869 | 191 | 0.024 | |
| negative regulation of transcription dna templated | GO:0045892 | 258 | 0.024 | |
| ribonucleotide catabolic process | GO:0009261 | 327 | 0.023 | |
| single organism catabolic process | GO:0044712 | 619 | 0.023 | |
| nucleoside triphosphate metabolic process | GO:0009141 | 364 | 0.023 | |
| single organism developmental process | GO:0044767 | 258 | 0.023 | |
| nucleoside catabolic process | GO:0009164 | 335 | 0.023 | |
| single organism reproductive process | GO:0044702 | 159 | 0.022 | |
| translation | GO:0006412 | 230 | 0.022 | |
| purine ribonucleoside triphosphate catabolic process | GO:0009207 | 327 | 0.022 | |
| rna catabolic process | GO:0006401 | 118 | 0.022 | |
| mrna processing | GO:0006397 | 185 | 0.021 | |
| regulation of cellular catabolic process | GO:0031329 | 195 | 0.021 | |
| regulation of response to stimulus | GO:0048583 | 157 | 0.021 | |
| positive regulation of cell death | GO:0010942 | 3 | 0.021 | |
| purine nucleoside metabolic process | GO:0042278 | 380 | 0.021 | |
| nucleotide catabolic process | GO:0009166 | 330 | 0.020 | |
| regulation of signaling | GO:0023051 | 119 | 0.020 | |
| glycoprotein metabolic process | GO:0009100 | 62 | 0.020 | |
| nucleoside monophosphate metabolic process | GO:0009123 | 267 | 0.020 | |
| programmed cell death | GO:0012501 | 30 | 0.020 | |
| oxoacid metabolic process | GO:0043436 | 351 | 0.020 | |
| negative regulation of gene expression | GO:0010629 | 312 | 0.019 | |
| protein localization to organelle | GO:0033365 | 337 | 0.019 | |
| mitotic cell cycle | GO:0000278 | 306 | 0.019 | |
| positive regulation of programmed cell death | GO:0043068 | 3 | 0.019 | |
| positive regulation of transcription from rna polymerase ii promoter | GO:0045944 | 252 | 0.018 | |
| ribonucleoside catabolic process | GO:0042454 | 332 | 0.017 | |
| organonitrogen compound catabolic process | GO:1901565 | 404 | 0.017 | |
| negative regulation of cellular component organization | GO:0051129 | 109 | 0.017 | |
| cellular response to extracellular stimulus | GO:0031668 | 150 | 0.016 | |
| response to abiotic stimulus | GO:0009628 | 159 | 0.016 | |
| purine ribonucleotide catabolic process | GO:0009154 | 327 | 0.016 | |
| negative regulation of macromolecule metabolic process | GO:0010605 | 375 | 0.015 | |
| negative regulation of cellular macromolecule biosynthetic process | GO:2000113 | 289 | 0.015 | |
| response to extracellular stimulus | GO:0009991 | 156 | 0.015 | |
| purine ribonucleotide metabolic process | GO:0009150 | 372 | 0.015 | |
| heterocycle catabolic process | GO:0046700 | 494 | 0.014 | |
| positive regulation of apoptotic process | GO:0043065 | 3 | 0.014 | |
| nucleoside phosphate catabolic process | GO:1901292 | 331 | 0.014 | |
| regulation of gene expression epigenetic | GO:0040029 | 147 | 0.014 | |
| aromatic compound catabolic process | GO:0019439 | 491 | 0.014 | |
| cellular response to external stimulus | GO:0071496 | 150 | 0.014 | |
| mrna splicing via spliceosome | GO:0000398 | 108 | 0.014 | |
| organelle assembly | GO:0070925 | 118 | 0.014 | |
| lipid biosynthetic process | GO:0008610 | 170 | 0.014 | |
| response to starvation | GO:0042594 | 96 | 0.013 | |
| response to unfolded protein | GO:0006986 | 29 | 0.013 | |
| negative regulation of biosynthetic process | GO:0009890 | 312 | 0.013 | |
| positive regulation of transcription dna templated | GO:0045893 | 286 | 0.013 | |
| carbohydrate derivative catabolic process | GO:1901136 | 339 | 0.012 | |
| response to organic cyclic compound | GO:0014070 | 1 | 0.012 | |
| developmental process | GO:0032502 | 261 | 0.012 | |
| purine nucleoside catabolic process | GO:0006152 | 330 | 0.012 | |
| glycosyl compound metabolic process | GO:1901657 | 398 | 0.012 | |
| carbohydrate derivative biosynthetic process | GO:1901137 | 181 | 0.012 | |
| ribonucleoside monophosphate catabolic process | GO:0009158 | 224 | 0.012 | |
| purine ribonucleoside metabolic process | GO:0046128 | 380 | 0.012 | |
| ribonucleoside triphosphate catabolic process | GO:0009203 | 327 | 0.012 | |
| organic cyclic compound catabolic process | GO:1901361 | 499 | 0.011 | |
| negative regulation of organelle organization | GO:0010639 | 103 | 0.011 | |
| positive regulation of cell communication | GO:0010647 | 28 | 0.011 | |
| regulation of cell cycle | GO:0051726 | 195 | 0.011 | |
| positive regulation of cellular component organization | GO:0051130 | 116 | 0.011 | |
| negative regulation of macromolecule biosynthetic process | GO:0010558 | 291 | 0.011 | |
| purine ribonucleoside catabolic process | GO:0046130 | 330 | 0.011 | |
| purine containing compound catabolic process | GO:0072523 | 332 | 0.011 | |
| cellular response to abiotic stimulus | GO:0071214 | 62 | 0.010 | |
| carboxylic acid metabolic process | GO:0019752 | 338 | 0.010 | |
| purine containing compound metabolic process | GO:0072521 | 400 | 0.010 | |
| regulation of translation | GO:0006417 | 89 | 0.010 | |
| organic acid biosynthetic process | GO:0016053 | 152 | 0.010 | |
| regulation of protein metabolic process | GO:0051246 | 237 | 0.010 | |
| organophosphate biosynthetic process | GO:0090407 | 182 | 0.010 | |
