| recombinational repair | GO:0000725 | 64 | 0.612 | |
| double strand break repair via homologous recombination | GO:0000724 | 54 | 0.562 | |
| dna recombination | GO:0006310 | 172 | 0.525 | |
| double strand break repair | GO:0006302 | 105 | 0.433 | |
| cellular response to dna damage stimulus | GO:0006974 | 287 | 0.360 | |
| dna repair | GO:0006281 | 236 | 0.335 | |
| dna replication | GO:0006260 | 147 | 0.271 | |
| carbohydrate derivative metabolic process | GO:1901135 | 549 | 0.133 | |
| organophosphate biosynthetic process | GO:0090407 | 182 | 0.122 | |
| cell communication | GO:0007154 | 345 | 0.095 | Fly |
| positive regulation of nitrogen compound metabolic process | GO:0051173 | 412 | 0.086 | |
| positive regulation of biosynthetic process | GO:0009891 | 336 | 0.085 | |
| anatomical structure morphogenesis | GO:0009653 | 160 | 0.072 | |
| single organism developmental process | GO:0044767 | 258 | 0.071 | Fly |
| lipid metabolic process | GO:0006629 | 269 | 0.069 | |
| protein localization to organelle | GO:0033365 | 337 | 0.068 | |
| mitotic cell cycle process | GO:1903047 | 294 | 0.061 | |
| positive regulation of gene expression | GO:0010628 | 321 | 0.056 | |
| cellular chemical homeostasis | GO:0055082 | 123 | 0.053 | |
| positive regulation of nucleobase containing compound metabolic process | GO:0045935 | 409 | 0.052 | |
| lipid biosynthetic process | GO:0008610 | 170 | 0.048 | |
| dna geometric change | GO:0032392 | 43 | 0.048 | Fly |
| regulation of transcription from rna polymerase ii promoter | GO:0006357 | 394 | 0.047 | |
| double strand break repair via break induced replication | GO:0000727 | 25 | 0.047 | |
| negative regulation of cellular biosynthetic process | GO:0031327 | 312 | 0.046 | |
| establishment of protein localization to organelle | GO:0072594 | 278 | 0.045 | |
| heterocycle catabolic process | GO:0046700 | 494 | 0.045 | |
| organophosphate metabolic process | GO:0019637 | 597 | 0.044 | |
| aromatic compound catabolic process | GO:0019439 | 491 | 0.043 | |
| positive regulation of rna metabolic process | GO:0051254 | 294 | 0.043 | |
| regulation of cell cycle phase transition | GO:1901987 | 70 | 0.043 | |
| developmental process | GO:0032502 | 261 | 0.042 | Fly |
| regulation of mitotic cell cycle | GO:0007346 | 107 | 0.042 | |
| dna conformation change | GO:0071103 | 98 | 0.042 | Fly |
| response to chemical | GO:0042221 | 390 | 0.041 | |
| cell cycle g1 s phase transition | GO:0044843 | 64 | 0.041 | |
| negative regulation of nucleic acid templated transcription | GO:1903507 | 260 | 0.040 | |
| telomere maintenance | GO:0000723 | 74 | 0.040 | |
| homeostatic process | GO:0042592 | 227 | 0.039 | |
| negative regulation of biosynthetic process | GO:0009890 | 312 | 0.039 | |
| dna dependent dna replication | GO:0006261 | 115 | 0.039 | |
| cellular response to organic substance | GO:0071310 | 159 | 0.038 | |
| positive regulation of macromolecule metabolic process | GO:0010604 | 394 | 0.038 | |
| anatomical structure development | GO:0048856 | 160 | 0.037 | Fly |
| positive regulation of rna biosynthetic process | GO:1902680 | 286 | 0.037 | |
| positive regulation of macromolecule biosynthetic process | GO:0010557 | 325 | 0.036 | |
| single organism signaling | GO:0044700 | 208 | 0.036 | Fly |
| negative regulation of rna metabolic process | GO:0051253 | 262 | 0.036 | |
| organonitrogen compound biosynthetic process | GO:1901566 | 314 | 0.036 | |
| nucleotide metabolic process | GO:0009117 | 453 | 0.035 | |
| cellular nitrogen compound catabolic process | GO:0044270 | 494 | 0.033 | |
| telomere organization | GO:0032200 | 75 | 0.033 | |
| lipoprotein metabolic process | GO:0042157 | 40 | 0.032 | |
| mitotic cell cycle | GO:0000278 | 306 | 0.032 | |
| trna processing | GO:0008033 | 101 | 0.031 | |
| signaling | GO:0023052 | 208 | 0.030 | Fly |
| regulation of biological quality | GO:0065008 | 391 | 0.029 | |
| regulation of localization | GO:0032879 | 127 | 0.028 | |
| chromatin silencing | GO:0006342 | 147 | 0.028 | |
| cellular lipid metabolic process | GO:0044255 | 229 | 0.027 | |
| negative regulation of rna biosynthetic process | GO:1902679 | 260 | 0.026 | |
| nucleobase containing compound catabolic process | GO:0034655 | 479 | 0.026 | |
| ribosome biogenesis | GO:0042254 | 335 | 0.025 | |
| anatomical structure homeostasis | GO:0060249 | 74 | 0.025 | |
| oxoacid metabolic process | GO:0043436 | 351 | 0.025 | |
| protein catabolic process | GO:0030163 | 221 | 0.025 | |
| cellular component disassembly | GO:0022411 | 86 | 0.024 | |
| positive regulation of cell cycle | GO:0045787 | 32 | 0.024 | |
| ribonucleoside metabolic process | GO:0009119 | 389 | 0.024 | |
| negative regulation of nitrogen compound metabolic process | GO:0051172 | 300 | 0.024 | |
| nucleobase containing small molecule metabolic process | GO:0055086 | 491 | 0.024 | |
| positive regulation of cellular biosynthetic process | GO:0031328 | 336 | 0.023 | |
| negative regulation of cellular macromolecule biosynthetic process | GO:2000113 | 289 | 0.023 | |
| cellular response to chemical stimulus | GO:0070887 | 315 | 0.023 | |
| carbohydrate derivative biosynthetic process | GO:1901137 | 181 | 0.022 | |
| nucleoside catabolic process | GO:0009164 | 335 | 0.022 | |
| single organism catabolic process | GO:0044712 | 619 | 0.022 | |
| cellular developmental process | GO:0048869 | 191 | 0.022 | Fly |
| carboxylic acid metabolic process | GO:0019752 | 338 | 0.022 | |
| cellular cation homeostasis | GO:0030003 | 100 | 0.022 | |
| ncrna processing | GO:0034470 | 330 | 0.022 | |
| cellular ion homeostasis | GO:0006873 | 112 | 0.022 | |
| regulation of cell cycle | GO:0051726 | 195 | 0.022 | |
| organic cyclic compound catabolic process | GO:1901361 | 499 | 0.022 | |
| aging | GO:0007568 | 71 | 0.022 | |
| cellular homeostasis | GO:0019725 | 138 | 0.021 | |
| dna duplex unwinding | GO:0032508 | 42 | 0.021 | Fly |
| organic acid metabolic process | GO:0006082 | 352 | 0.021 | |
| response to organic substance | GO:0010033 | 182 | 0.021 | |
| positive regulation of nucleic acid templated transcription | GO:1903508 | 286 | 0.021 | |
| glycerophospholipid biosynthetic process | GO:0046474 | 68 | 0.021 | |
| positive regulation of transcription dna templated | GO:0045893 | 286 | 0.021 | |
| cytoskeleton organization | GO:0007010 | 230 | 0.020 | |
| regulation of transcription by chromatin organization | GO:0034401 | 19 | 0.020 | |
| carbohydrate derivative catabolic process | GO:1901136 | 339 | 0.020 | |
| glycerophospholipid metabolic process | GO:0006650 | 98 | 0.020 | |
| cellular component movement | GO:0006928 | 20 | 0.020 | |
| mitotic nuclear division | GO:0007067 | 131 | 0.019 | |
| protein transport | GO:0015031 | 345 | 0.019 | |
| mrna processing | GO:0006397 | 185 | 0.019 | |
| negative regulation of gene expression epigenetic | GO:0045814 | 147 | 0.019 | |
| ion homeostasis | GO:0050801 | 118 | 0.019 | |
| negative regulation of nucleobase containing compound metabolic process | GO:0045934 | 295 | 0.019 | |
| phospholipid metabolic process | GO:0006644 | 125 | 0.018 | |
| response to abiotic stimulus | GO:0009628 | 159 | 0.018 | |
| organonitrogen compound catabolic process | GO:1901565 | 404 | 0.018 | |
| negative regulation of macromolecule biosynthetic process | GO:0010558 | 291 | 0.018 | |
| signal transduction | GO:0007165 | 208 | 0.017 | |
| regulation of cellular component organization | GO:0051128 | 334 | 0.017 | |
| gene silencing | GO:0016458 | 151 | 0.017 | |
| posttranscriptional regulation of gene expression | GO:0010608 | 115 | 0.017 | |
| g1 s transition of mitotic cell cycle | GO:0000082 | 64 | 0.017 | |
| positive regulation of transcription from rna polymerase ii promoter | GO:0045944 | 252 | 0.017 | |
| rrna processing | GO:0006364 | 227 | 0.016 | |
| trna metabolic process | GO:0006399 | 151 | 0.016 | |
| phospholipid biosynthetic process | GO:0008654 | 89 | 0.016 | |
| regulation of mitotic cell cycle phase transition | GO:1901990 | 68 | 0.016 | |
| negative regulation of transcription dna templated | GO:0045892 | 258 | 0.015 | |
| response to temperature stimulus | GO:0009266 | 74 | 0.015 | |
| microtubule based process | GO:0007017 | 117 | 0.015 | |
| macromolecule catabolic process | GO:0009057 | 383 | 0.015 | |
| glycerolipid biosynthetic process | GO:0045017 | 71 | 0.015 | |
| negative regulation of transcription from rna polymerase ii promoter | GO:0000122 | 137 | 0.015 | |
| nucleoside phosphate biosynthetic process | GO:1901293 | 80 | 0.015 | |
| chromatin organization | GO:0006325 | 242 | 0.015 | |
| phosphatidylinositol metabolic process | GO:0046488 | 62 | 0.015 | |
| ion transport | GO:0006811 | 274 | 0.015 | |
| cellular response to extracellular stimulus | GO:0031668 | 150 | 0.015 | |
| purine nucleotide metabolic process | GO:0006163 | 376 | 0.015 | |
| positive regulation of cell cycle process | GO:0090068 | 31 | 0.015 | |
| nucleoside metabolic process | GO:0009116 | 394 | 0.015 | |
| chromatin modification | GO:0016568 | 200 | 0.014 | |
| cell cycle phase transition | GO:0044770 | 144 | 0.014 | |
| cellular macromolecule catabolic process | GO:0044265 | 363 | 0.014 | |
| establishment of protein localization | GO:0045184 | 367 | 0.014 | |
| cellular transition metal ion homeostasis | GO:0046916 | 59 | 0.014 | |
| purine ribonucleotide metabolic process | GO:0009150 | 372 | 0.014 | |
| transition metal ion homeostasis | GO:0055076 | 59 | 0.014 | |
| glycosyl compound catabolic process | GO:1901658 | 335 | 0.014 | |
| single organism cellular localization | GO:1902580 | 375 | 0.014 | |
| response to nutrient levels | GO:0031667 | 150 | 0.014 | |
| cell differentiation | GO:0030154 | 161 | 0.014 | Fly |
| cell aging | GO:0007569 | 70 | 0.014 | |
| transmembrane transport | GO:0055085 | 349 | 0.014 | |
| single organism reproductive process | GO:0044702 | 159 | 0.014 | |
| dna replication initiation | GO:0006270 | 48 | 0.013 | |
| ion transmembrane transport | GO:0034220 | 200 | 0.013 | |
| chemical homeostasis | GO:0048878 | 137 | 0.013 | |
| cellular metal ion homeostasis | GO:0006875 | 78 | 0.013 | |
| macromolecular complex disassembly | GO:0032984 | 80 | 0.013 | |
| gpi anchor metabolic process | GO:0006505 | 28 | 0.013 | |
| multi organism reproductive process | GO:0044703 | 216 | 0.013 | |
| positive regulation of molecular function | GO:0044093 | 185 | 0.012 | |
| translesion synthesis | GO:0019985 | 16 | 0.012 | |
| glycerolipid metabolic process | GO:0046486 | 108 | 0.012 | |
| negative regulation of cellular metabolic process | GO:0031324 | 407 | 0.012 | |
| ribose phosphate metabolic process | GO:0019693 | 384 | 0.012 | |
| response to extracellular stimulus | GO:0009991 | 156 | 0.012 | |
| sexual reproduction | GO:0019953 | 216 | 0.012 | |
| positive regulation of mitotic cell cycle | GO:0045931 | 16 | 0.012 | |
| rna splicing via transesterification reactions with bulged adenosine as nucleophile | GO:0000377 | 109 | 0.012 | |
| sulfur compound metabolic process | GO:0006790 | 95 | 0.012 | |
| spindle organization | GO:0007051 | 37 | 0.012 | |
| intracellular protein transport | GO:0006886 | 319 | 0.012 | |
| dna unwinding involved in dna replication | GO:0006268 | 13 | 0.012 | |
| pyrimidine containing compound biosynthetic process | GO:0072528 | 33 | 0.012 | |
| protein localization to vacuole | GO:0072665 | 92 | 0.012 | |
| negative regulation of macromolecule metabolic process | GO:0010605 | 375 | 0.012 | |
| regulation of cellular ketone metabolic process | GO:0010565 | 42 | 0.012 | |
| nucleoside phosphate metabolic process | GO:0006753 | 458 | 0.011 | |
| response to inorganic substance | GO:0010035 | 47 | 0.011 | |
| establishment of sister chromatid cohesion | GO:0034085 | 17 | 0.011 | |
| organic acid biosynthetic process | GO:0016053 | 152 | 0.011 | |
| purine nucleoside triphosphate catabolic process | GO:0009146 | 329 | 0.011 | |
| metal ion homeostasis | GO:0055065 | 79 | 0.011 | |
| response to organic cyclic compound | GO:0014070 | 1 | 0.011 | |
| modification dependent protein catabolic process | GO:0019941 | 181 | 0.011 | |
| cell division | GO:0051301 | 205 | 0.011 | |
| lipoprotein biosynthetic process | GO:0042158 | 40 | 0.010 | |
| dna strand elongation involved in dna replication | GO:0006271 | 26 | 0.010 | |
| purine containing compound metabolic process | GO:0072521 | 400 | 0.010 | |
| regulation of nucleotide metabolic process | GO:0006140 | 110 | 0.010 | |
| cellular response to external stimulus | GO:0071496 | 150 | 0.010 | |
| protein complex disassembly | GO:0043241 | 70 | 0.010 | |
