| iron sulfur cluster assembly | GO:0016226 | 22 | 0.886 | |
| metallo sulfur cluster assembly | GO:0031163 | 22 | 0.734 | |
| organic anion transport | GO:0015711 | 114 | 0.413 | |
| ion homeostasis | GO:0050801 | 118 | 0.402 | |
| cellular transition metal ion homeostasis | GO:0046916 | 59 | 0.400 | |
| lipid metabolic process | GO:0006629 | 269 | 0.384 | |
| cellular iron ion homeostasis | GO:0006879 | 34 | 0.339 | |
| organic acid metabolic process | GO:0006082 | 352 | 0.337 | |
| iron ion homeostasis | GO:0055072 | 34 | 0.321 | |
| metal ion homeostasis | GO:0055065 | 79 | 0.317 | |
| cellular ion homeostasis | GO:0006873 | 112 | 0.266 | |
| oxoacid metabolic process | GO:0043436 | 351 | 0.246 | |
| chemical homeostasis | GO:0048878 | 137 | 0.237 | |
| cellular cation homeostasis | GO:0030003 | 100 | 0.192 | |
| homeostatic process | GO:0042592 | 227 | 0.191 | |
| organonitrogen compound biosynthetic process | GO:1901566 | 314 | 0.171 | |
| cellular amino acid metabolic process | GO:0006520 | 225 | 0.157 | |
| cellular metal ion homeostasis | GO:0006875 | 78 | 0.150 | |
| cation homeostasis | GO:0055080 | 105 | 0.148 | |
| anion transport | GO:0006820 | 145 | 0.146 | |
| nitrogen compound transport | GO:0071705 | 212 | 0.144 | |
| carboxylic acid metabolic process | GO:0019752 | 338 | 0.128 | |
| response to chemical | GO:0042221 | 390 | 0.127 | |
| cellular lipid metabolic process | GO:0044255 | 229 | 0.111 | |
| carboxylic acid biosynthetic process | GO:0046394 | 152 | 0.104 | |
| regulation of biological quality | GO:0065008 | 391 | 0.104 | |
| nucleobase containing small molecule metabolic process | GO:0055086 | 491 | 0.104 | |
| cellular response to chemical stimulus | GO:0070887 | 315 | 0.098 | |
| cellular chemical homeostasis | GO:0055082 | 123 | 0.094 | |
| small molecule biosynthetic process | GO:0044283 | 258 | 0.089 | |
| oxidation reduction process | GO:0055114 | 353 | 0.086 | |
| transition metal ion homeostasis | GO:0055076 | 59 | 0.076 | |
| vesicle mediated transport | GO:0016192 | 335 | 0.071 | |
| mitochondrion organization | GO:0007005 | 261 | 0.070 | |
| aerobic respiration | GO:0009060 | 55 | 0.067 | |
| organic acid transport | GO:0015849 | 77 | 0.067 | |
| response to organic substance | GO:0010033 | 182 | 0.067 | |
| cellular response to oxidative stress | GO:0034599 | 94 | 0.066 | |
| cellular homeostasis | GO:0019725 | 138 | 0.065 | |
| ion transport | GO:0006811 | 274 | 0.065 | |
| cellular respiration | GO:0045333 | 82 | 0.061 | |
| amine metabolic process | GO:0009308 | 51 | 0.058 | |
| nucleoside phosphate metabolic process | GO:0006753 | 458 | 0.056 | |
| signaling | GO:0023052 | 208 | 0.055 | |
| response to oxidative stress | GO:0006979 | 99 | 0.055 | |
| fatty acid metabolic process | GO:0006631 | 51 | 0.051 | |
| positive regulation of macromolecule metabolic process | GO:0010604 | 394 | 0.045 | |
| organic cyclic compound catabolic process | GO:1901361 | 499 | 0.042 | |
| transmembrane transport | GO:0055085 | 349 | 0.039 | |
| regulation of transport | GO:0051049 | 85 | 0.039 | |
| organophosphate metabolic process | GO:0019637 | 597 | 0.038 | |
| cellular biogenic amine metabolic process | GO:0006576 | 37 | 0.036 | |
| cell communication | GO:0007154 | 345 | 0.035 | |
| purine nucleoside metabolic process | GO:0042278 | 380 | 0.035 | |
| small molecule catabolic process | GO:0044282 | 88 | 0.034 | |
| nucleoside metabolic process | GO:0009116 | 394 | 0.032 | |
| carboxylic acid transport | GO:0046942 | 74 | 0.032 | |
| response to abiotic stimulus | GO:0009628 | 159 | 0.032 | |
| single organism catabolic process | GO:0044712 | 619 | 0.032 | |
| single organism signaling | GO:0044700 | 208 | 0.032 | |
| heterocycle catabolic process | GO:0046700 | 494 | 0.031 | |
| organic acid catabolic process | GO:0016054 | 71 | 0.031 | |
| monocarboxylic acid metabolic process | GO:0032787 | 122 | 0.030 | |
| cellular modified amino acid metabolic process | GO:0006575 | 51 | 0.029 | |
| regulation of organelle organization | GO:0033043 | 243 | 0.029 | |
| positive regulation of cellular component organization | GO:0051130 | 116 | 0.028 | |
| single organism membrane organization | GO:0044802 | 275 | 0.028 | |
| proteasomal protein catabolic process | GO:0010498 | 141 | 0.028 | |
| purine containing compound metabolic process | GO:0072521 | 400 | 0.027 | |
| response to organic cyclic compound | GO:0014070 | 1 | 0.027 | |
| signal transduction | GO:0007165 | 208 | 0.027 | |
| response to external stimulus | GO:0009605 | 158 | 0.027 | |
| positive regulation of biosynthetic process | GO:0009891 | 336 | 0.026 | |
| response to nutrient levels | GO:0031667 | 150 | 0.026 | |
| regulation of catalytic activity | GO:0050790 | 307 | 0.024 | |
| regulation of localization | GO:0032879 | 127 | 0.024 | |
| cellular amine metabolic process | GO:0044106 | 51 | 0.022 | |
| carbohydrate derivative metabolic process | GO:1901135 | 549 | 0.022 | |
| cellular response to organic substance | GO:0071310 | 159 | 0.022 | |
| nucleotide metabolic process | GO:0009117 | 453 | 0.021 | |
| organic hydroxy compound metabolic process | GO:1901615 | 125 | 0.021 | |
| protein complex biogenesis | GO:0070271 | 314 | 0.021 | |
| energy derivation by oxidation of organic compounds | GO:0015980 | 125 | 0.021 | |
| positive regulation of protein metabolic process | GO:0051247 | 93 | 0.021 | |
| protein catabolic process | GO:0030163 | 221 | 0.021 | |
| regulation of protein metabolic process | GO:0051246 | 237 | 0.021 | |
| nucleobase containing compound transport | GO:0015931 | 124 | 0.020 | |
| growth | GO:0040007 | 157 | 0.020 | |
| regulation of signaling | GO:0023051 | 119 | 0.019 | |
| regulation of dna metabolic process | GO:0051052 | 100 | 0.019 | |
| maintenance of location | GO:0051235 | 66 | 0.019 | |
| positive regulation of macromolecule biosynthetic process | GO:0010557 | 325 | 0.019 | |
| cofactor metabolic process | GO:0051186 | 126 | 0.019 | |
| developmental process | GO:0032502 | 261 | 0.018 | |
| response to oxygen containing compound | GO:1901700 | 61 | 0.018 | |
| regulation of cell cycle | GO:0051726 | 195 | 0.018 | |
| aromatic compound catabolic process | GO:0019439 | 491 | 0.018 | |
| pyridine containing compound metabolic process | GO:0072524 | 53 | 0.017 | |
| carboxylic acid catabolic process | GO:0046395 | 71 | 0.017 | |
| positive regulation of molecular function | GO:0044093 | 185 | 0.017 | |
| sexual reproduction | GO:0019953 | 216 | 0.017 | |
| ribonucleoside metabolic process | GO:0009119 | 389 | 0.017 | |
| positive regulation of catalytic activity | GO:0043085 | 178 | 0.016 | |
| positive regulation of nitrogen compound metabolic process | GO:0051173 | 412 | 0.016 | |
| cofactor biosynthetic process | GO:0051188 | 80 | 0.016 | |
| organonitrogen compound catabolic process | GO:1901565 | 404 | 0.016 | |
| monocarboxylic acid transport | GO:0015718 | 24 | 0.016 | |
| lipid catabolic process | GO:0016042 | 33 | 0.016 | |
| cellular response to extracellular stimulus | GO:0031668 | 150 | 0.016 | |
| regulation of cellular component organization | GO:0051128 | 334 | 0.016 | |
| lipid localization | GO:0010876 | 60 | 0.016 | |
| organic acid biosynthetic process | GO:0016053 | 152 | 0.016 | |
| ncrna processing | GO:0034470 | 330 | 0.015 | |
| organelle fission | GO:0048285 | 272 | 0.015 | |
| sulfur compound biosynthetic process | GO:0044272 | 53 | 0.015 | |
| cellular nitrogen compound catabolic process | GO:0044270 | 494 | 0.015 | |
| membrane organization | GO:0061024 | 276 | 0.015 | |
| macromolecule catabolic process | GO:0009057 | 383 | 0.014 | |
| nucleobase containing compound catabolic process | GO:0034655 | 479 | 0.014 | |
| meiotic cell cycle | GO:0051321 | 272 | 0.013 | |
| regulation of hydrolase activity | GO:0051336 | 133 | 0.013 | |
| positive regulation of secretion | GO:0051047 | 2 | 0.013 | |
| amino acid transport | GO:0006865 | 45 | 0.013 | |
| regulation of molecular function | GO:0065009 | 320 | 0.013 | |
| regulation of cellular localization | GO:0060341 | 50 | 0.012 | |
| positive regulation of cellular biosynthetic process | GO:0031328 | 336 | 0.012 | |
| cellular response to oxygen containing compound | GO:1901701 | 43 | 0.012 | |
| regulation of translation | GO:0006417 | 89 | 0.012 | |
| glycerophospholipid metabolic process | GO:0006650 | 98 | 0.012 | |
| protein localization to membrane | GO:0072657 | 102 | 0.012 | |
| positive regulation of phosphate metabolic process | GO:0045937 | 147 | 0.012 | |
| cellular ketone metabolic process | GO:0042180 | 63 | 0.012 | |
| positive regulation of nucleobase containing compound metabolic process | GO:0045935 | 409 | 0.012 | |
| mitochondrial respiratory chain complex assembly | GO:0033108 | 36 | 0.011 | |
| endomembrane system organization | GO:0010256 | 74 | 0.011 | |
| single organism developmental process | GO:0044767 | 258 | 0.011 | |
| positive regulation of cellular catabolic process | GO:0031331 | 128 | 0.011 | |
| protein transport | GO:0015031 | 345 | 0.011 | |
| regulation of cellular protein metabolic process | GO:0032268 | 232 | 0.011 | |
| secretion | GO:0046903 | 50 | 0.011 | |
| endocytosis | GO:0006897 | 90 | 0.011 | |
| anatomical structure morphogenesis | GO:0009653 | 160 | 0.011 | |
| negative regulation of nitrogen compound metabolic process | GO:0051172 | 300 | 0.011 | |
| dicarboxylic acid metabolic process | GO:0043648 | 20 | 0.011 | |
| translation | GO:0006412 | 230 | 0.011 | |
| response to extracellular stimulus | GO:0009991 | 156 | 0.011 | |
| regulation of cellular amine metabolic process | GO:0033238 | 21 | 0.010 | |
| positive regulation of organelle organization | GO:0010638 | 85 | 0.010 | |
| regulation of metal ion transport | GO:0010959 | 2 | 0.010 | |
| multi organism reproductive process | GO:0044703 | 216 | 0.010 | |
| multi organism process | GO:0051704 | 233 | 0.010 | |
| sulfur compound metabolic process | GO:0006790 | 95 | 0.010 | |
| response to hypoxia | GO:0001666 | 4 | 0.010 | |
| purine ribonucleoside metabolic process | GO:0046128 | 380 | 0.010 | |
