| positive regulation of macromolecule metabolic process | GO:0010604 | 405 | 0.728 | |
| transcription from rna polymerase ii promoter | GO:0006366 | 368 | 0.684 | |
| positive regulation of rna metabolic process | GO:0051254 | 271 | 0.590 | |
| regulation of transcription from rna polymerase ii promoter | GO:0006357 | 378 | 0.580 | |
| positive regulation of nucleobase containing compound metabolic process | GO:0045935 | 332 | 0.506 | |
| positive regulation of gene expression | GO:0010628 | 290 | 0.435 | |
| positive regulation of nucleic acid templated transcription | GO:1903508 | 266 | 0.420 | |
| positive regulation of transcription dna templated | GO:0045893 | 266 | 0.420 | |
| positive regulation of nitrogen compound metabolic process | GO:0051173 | 354 | 0.413 | |
| mitotic g2 m transition checkpoint | GO:0044818 | 70 | 0.399 | |
| positive regulation of rna biosynthetic process | GO:1902680 | 266 | 0.387 | |
| mitotic dna integrity checkpoint | GO:0044774 | 75 | 0.356 | |
| cell cycle checkpoint | GO:0000075 | 95 | 0.351 | |
| positive regulation of macromolecule biosynthetic process | GO:0010557 | 283 | 0.343 | |
| positive regulation of cellular biosynthetic process | GO:0031328 | 316 | 0.308 | |
| nuclear division | GO:0000280 | 332 | 0.289 | |
| meiotic cell cycle | GO:0051321 | 171 | 0.285 | |
| g2 dna damage checkpoint | GO:0031572 | 69 | 0.282 | |
| negative regulation of cell cycle phase transition | GO:1901988 | 103 | 0.265 | |
| dna damage checkpoint | GO:0000077 | 78 | 0.265 | |
| mitotic g2 dna damage checkpoint | GO:0007095 | 69 | 0.235 | |
| positive regulation of biosynthetic process | GO:0009891 | 316 | 0.214 | |
| regulation of cell cycle | GO:0051726 | 291 | 0.214 | |
| positive regulation of transcription from rna polymerase ii promoter | GO:0045944 | 204 | 0.200 | |
| negative regulation of mitotic cell cycle | GO:0045930 | 109 | 0.180 | |
| cell cycle phase transition | GO:0044770 | 140 | 0.156 | |
| regulation of organelle organization | GO:0033043 | 196 | 0.145 | |
| mitotic cell cycle checkpoint | GO:0007093 | 88 | 0.142 | |
| organelle assembly | GO:0070925 | 198 | 0.122 | |
| endocytosis | GO:0006897 | 310 | 0.113 | |
| organelle fission | GO:0048285 | 340 | 0.112 | |
| regulation of cell cycle process | GO:0010564 | 181 | 0.111 | |
| mitotic dna damage checkpoint | GO:0044773 | 74 | 0.101 | |
| regulation of multicellular organismal development | GO:2000026 | 414 | 0.101 | |
| vesicle mediated transport | GO:0016192 | 381 | 0.094 | |
| embryo development ending in birth or egg hatching | GO:0009792 | 152 | 0.093 | |
| negative regulation of developmental process | GO:0051093 | 201 | 0.091 | |
| negative regulation of mitotic cell cycle phase transition | GO:1901991 | 103 | 0.091 | |
| cellular macromolecular complex assembly | GO:0034622 | 153 | 0.090 | |
| regulation of nervous system development | GO:0051960 | 248 | 0.085 | |
| negative regulation of cell differentiation | GO:0045596 | 143 | 0.080 | |
| cell division | GO:0051301 | 248 | 0.080 | |
| negative regulation of cell cycle | GO:0045786 | 116 | 0.079 | |
| dna integrity checkpoint | GO:0031570 | 81 | 0.078 | |
| regulation of mitotic cell cycle phase transition | GO:1901990 | 130 | 0.077 | |
| regulation of cell proliferation | GO:0042127 | 163 | 0.075 | |
| growth | GO:0040007 | 359 | 0.074 | |
| dna templated transcription initiation | GO:0006352 | 25 | 0.069 | |
| regulation of cell differentiation | GO:0045595 | 302 | 0.068 | |
| mitotic nuclear division | GO:0007067 | 213 | 0.068 | |
| mitotic cell cycle phase transition | GO:0044772 | 138 | 0.067 | |
| positive regulation of cellular component biogenesis | GO:0044089 | 80 | 0.067 | |
| cellular nitrogen compound catabolic process | GO:0044270 | 165 | 0.064 | |
| transcription initiation from rna polymerase ii promoter | GO:0006367 | 25 | 0.063 | |
| cell proliferation | GO:0008283 | 299 | 0.062 | |
| stem cell proliferation | GO:0072089 | 88 | 0.058 | |
| nucleobase containing compound catabolic process | GO:0034655 | 165 | 0.058 | |
| negative regulation of transcription from rna polymerase ii promoter | GO:0000122 | 119 | 0.057 | |
| protein complex biogenesis | GO:0070271 | 201 | 0.056 | |
| cellular catabolic process | GO:0044248 | 372 | 0.055 | |
| regulation of cell development | GO:0060284 | 215 | 0.054 | |
| regulation of mitotic cell cycle | GO:0007346 | 190 | 0.052 | |
| dna replication | GO:0006260 | 48 | 0.051 | |
| mrna catabolic process | GO:0006402 | 33 | 0.049 | |
| regulation of cell cycle phase transition | GO:1901987 | 130 | 0.049 | |
| macromolecular complex assembly | GO:0065003 | 256 | 0.049 | |
| organic cyclic compound catabolic process | GO:1901361 | 168 | 0.047 | |
| positive regulation of developmental growth | GO:0048639 | 62 | 0.046 | |
| organic substance catabolic process | GO:1901575 | 308 | 0.041 | |
| meiotic nuclear division | GO:0007126 | 151 | 0.040 | |
| macromolecule catabolic process | GO:0009057 | 161 | 0.039 | |
| neuroblast proliferation | GO:0007405 | 74 | 0.037 | |
| regulation of growth | GO:0040008 | 233 | 0.036 | |
| aromatic compound catabolic process | GO:0019439 | 166 | 0.035 | |
| phagocytosis | GO:0006909 | 215 | 0.034 | |
| heterocycle catabolic process | GO:0046700 | 166 | 0.034 | |
| regulation of meiosis | GO:0040020 | 3 | 0.033 | |
| cell death | GO:0008219 | 279 | 0.033 | |
| negative regulation of stem cell proliferation | GO:2000647 | 30 | 0.033 | |
| rna interference | GO:0016246 | 27 | 0.032 | |
| ribonucleoprotein complex disassembly | GO:0032988 | 1 | 0.032 | |
| cellular macromolecule catabolic process | GO:0044265 | 136 | 0.031 | |
| negative regulation of rna biosynthetic process | GO:1902679 | 240 | 0.031 | |
| phosphorylation | GO:0016310 | 294 | 0.031 | |
| regulation of multi organism process | GO:0043900 | 131 | 0.031 | |
| negative regulation of cell cycle process | GO:0010948 | 109 | 0.029 | |
| regulation of immune system process | GO:0002682 | 176 | 0.029 | |
| negative regulation of nucleobase containing compound metabolic process | GO:0045934 | 261 | 0.027 | |
| ribonucleoprotein complex biogenesis | GO:0022613 | 31 | 0.027 | |
| regulation of cellular component biogenesis | GO:0044087 | 201 | 0.027 | |
| rna splicing via transesterification reactions with bulged adenosine as nucleophile | GO:0000377 | 73 | 0.026 | |
| negative regulation of biosynthetic process | GO:0009890 | 277 | 0.025 | |
| regulation of cell division | GO:0051302 | 72 | 0.025 | |
| negative regulation of multicellular organismal process | GO:0051241 | 142 | 0.025 | |
| negative regulation of cellular metabolic process | GO:0031324 | 382 | 0.024 | |
| trna transcription from rna polymerase iii promoter | GO:0042797 | 1 | 0.024 | |
| negative regulation of cellular biosynthetic process | GO:0031327 | 277 | 0.023 | |
| chromosome segregation | GO:0007059 | 157 | 0.023 | |
| intermediate filament cytoskeleton organization | GO:0045104 | 1 | 0.022 | |
| rna splicing via transesterification reactions | GO:0000375 | 73 | 0.021 | |
| positive regulation of cellular component organization | GO:0051130 | 156 | 0.020 | |
| regulation of developmental growth | GO:0048638 | 174 | 0.020 | |
| snrna 3 end processing | GO:0034472 | 14 | 0.020 | |
| apoptotic process | GO:0006915 | 159 | 0.020 | |
| catabolic process | GO:0009056 | 409 | 0.020 | |
| positive regulation of growth | GO:0045927 | 75 | 0.019 | |
| regulation of rac gtpase activity | GO:0032314 | 1 | 0.019 | |
| rna processing | GO:0006396 | 147 | 0.018 | |
| regulation of intracellular signal transduction | GO:1902531 | 236 | 0.018 | |
| mrna processing | GO:0006397 | 104 | 0.018 | |
| larval development | GO:0002164 | 104 | 0.018 | |
| camera type eye development | GO:0043010 | 4 | 0.018 | |
| cellular protein complex assembly | GO:0043623 | 71 | 0.018 | |
| cellular component assembly involved in morphogenesis | GO:0010927 | 151 | 0.018 | |
| intracellular steroid hormone receptor signaling pathway | GO:0030518 | 12 | 0.018 | |
| regulation of neuroblast proliferation | GO:1902692 | 34 | 0.018 | |
| negative regulation of nucleic acid templated transcription | GO:1903507 | 240 | 0.017 | |
| dna dependent dna replication | GO:0006261 | 17 | 0.017 | |
| negative regulation of macromolecule biosynthetic process | GO:0010558 | 270 | 0.017 | |
| protein complex assembly | GO:0006461 | 200 | 0.017 | |
| death | GO:0016265 | 284 | 0.017 | |
| chromatin modification | GO:0016568 | 147 | 0.017 | |
| regulation of stem cell proliferation | GO:0072091 | 40 | 0.016 | |
| eye development | GO:0001654 | 323 | 0.016 | |
| positive regulation of lipid catabolic process | GO:0050996 | 1 | 0.016 | |
| negative regulation of nervous system development | GO:0051961 | 92 | 0.016 | |
| rna splicing | GO:0008380 | 83 | 0.015 | |
| rna catabolic process | GO:0006401 | 37 | 0.015 | |
| programmed cell death | GO:0012501 | 257 | 0.015 | |
| posttranscriptional gene silencing by rna | GO:0035194 | 45 | 0.015 | |
| protein localization to organelle | GO:0033365 | 82 | 0.014 | |
| sister chromatid segregation | GO:0000819 | 92 | 0.014 | |
| response to biotic stimulus | GO:0009607 | 294 | 0.014 | |
| developmental growth | GO:0048589 | 280 | 0.014 | |
| positive regulation of cell cycle | GO:0045787 | 43 | 0.014 | |
| establishment of localization in cell | GO:0051649 | 402 | 0.014 | |
| mrna splicing via spliceosome | GO:0000398 | 73 | 0.014 | |
| negative regulation of signaling | GO:0023057 | 219 | 0.014 | |
| posttranscriptional regulation of gene expression | GO:0010608 | 145 | 0.014 | |
| sensory organ morphogenesis | GO:0090596 | 260 | 0.014 | |
| negative regulation of transcription dna templated | GO:0045892 | 237 | 0.014 | |
| regulation of phosphate metabolic process | GO:0019220 | 210 | 0.013 | |
| telomere maintenance | GO:0000723 | 21 | 0.013 | |
| protein deubiquitination | GO:0016579 | 17 | 0.013 | |
| muscle structure development | GO:0061061 | 224 | 0.013 | |
| cellular response to dna damage stimulus | GO:0006974 | 223 | 0.013 | |
| regulation of neurogenesis | GO:0050767 | 158 | 0.013 | |
| positive regulation of neuron projection regeneration | GO:0070572 | 3 | 0.013 | |
| cellular response to nutrient | GO:0031670 | 1 | 0.012 | |
| regulation of nuclear division | GO:0051783 | 58 | 0.012 | |
| ribonucleoprotein complex assembly | GO:0022618 | 23 | 0.012 | |
| snrna processing | GO:0016180 | 14 | 0.011 | |
| positive regulation of protein complex assembly | GO:0031334 | 22 | 0.011 | |
| dna metabolic process | GO:0006259 | 227 | 0.011 | |
| cellular protein localization | GO:0034613 | 160 | 0.011 | |
| nuclear transcribed mrna catabolic process | GO:0000956 | 24 | 0.011 | |
| negative regulation of cellular macromolecule biosynthetic process | GO:2000113 | 267 | 0.011 | |
| regionalization | GO:0003002 | 416 | 0.011 | |
| ribonucleoprotein complex subunit organization | GO:0071826 | 28 | 0.011 | |
| nucleoside phosphate metabolic process | GO:0006753 | 162 | 0.011 | |
| negative regulation of neurogenesis | GO:0050768 | 53 | 0.010 | |
| negative regulation of transcription factor import into nucleus | GO:0042992 | 4 | 0.010 | |
| chromatin organization | GO:0006325 | 207 | 0.010 | |
| mrna metabolic process | GO:0016071 | 124 | 0.010 | |