| actin cytoskeleton organization | GO:0030036 | 206 | 0.222 | |
| establishment of localization in cell | GO:0051649 | 402 | 0.214 | |
| mitochondrion organization | GO:0007005 | 65 | 0.202 | |
| response to organic substance | GO:0010033 | 284 | 0.195 | |
| cellular response to extracellular stimulus | GO:0031668 | 64 | 0.166 | |
| positive regulation of cellular component organization | GO:0051130 | 156 | 0.160 | |
| developmental pigmentation | GO:0048066 | 68 | 0.150 | |
| protein modification process | GO:0036211 | 438 | 0.148 | |
| autophagy | GO:0006914 | 108 | 0.141 | |
| membrane organization | GO:0061024 | 112 | 0.126 | |
| neuron projection guidance | GO:0097485 | 241 | 0.106 | |
| regulation of neurogenesis | GO:0050767 | 158 | 0.102 | |
| chemotaxis | GO:0006935 | 249 | 0.101 | |
| cell migration | GO:0016477 | 238 | 0.098 | |
| protein complex disassembly | GO:0043241 | 36 | 0.094 | |
| endocytosis | GO:0006897 | 310 | 0.093 | |
| cellular response to organic substance | GO:0071310 | 132 | 0.090 | |
| protein complex biogenesis | GO:0070271 | 201 | 0.089 | |
| vesicle mediated transport | GO:0016192 | 381 | 0.089 | |
| regulation of molecular function | GO:0065009 | 217 | 0.087 | |
| cellular catabolic process | GO:0044248 | 372 | 0.086 | |
| cellular response to external stimulus | GO:0071496 | 66 | 0.084 | |
| dorsal ventral pattern formation | GO:0009953 | 133 | 0.082 | |
| cellular protein modification process | GO:0006464 | 438 | 0.079 | |
| cellular response to chemical stimulus | GO:0070887 | 199 | 0.078 | |
| synaptic transmission | GO:0007268 | 288 | 0.078 | |
| axon development | GO:0061564 | 297 | 0.078 | |
| single organism membrane organization | GO:0044802 | 93 | 0.077 | |
| regulation of cell development | GO:0060284 | 215 | 0.073 | |
| cellular component disassembly | GO:0022411 | 46 | 0.070 | |
| actin filament based process | GO:0030029 | 220 | 0.069 | |
| protein localization | GO:0008104 | 284 | 0.066 | |
| regulation of nervous system development | GO:0051960 | 248 | 0.061 | |
| positive regulation of molecular function | GO:0044093 | 136 | 0.061 | |
| actin filament organization | GO:0007015 | 126 | 0.061 | |
| positive regulation of cellular protein metabolic process | GO:0032270 | 118 | 0.059 | |
| regulation of cellular protein metabolic process | GO:0032268 | 243 | 0.057 | |
| regulation of multicellular organismal development | GO:2000026 | 414 | 0.057 | |
| intracellular signal transduction | GO:0035556 | 300 | 0.055 | |
| regulation of localization | GO:0032879 | 275 | 0.055 | |
| positive regulation of protein metabolic process | GO:0051247 | 128 | 0.055 | |
| regulation of immune system process | GO:0002682 | 176 | 0.054 | |
| axon guidance | GO:0007411 | 233 | 0.054 | |
| localization of cell | GO:0051674 | 257 | 0.053 | |
| homeostatic process | GO:0042592 | 199 | 0.053 | |
| pigmentation | GO:0043473 | 75 | 0.052 | |
| regulation of cell cycle | GO:0051726 | 291 | 0.051 | |
| phosphorylation | GO:0016310 | 294 | 0.050 | |
| response to oxygen containing compound | GO:1901700 | 200 | 0.050 | |
| cellular response to starvation | GO:0009267 | 61 | 0.049 | |
| positive regulation of macromolecule metabolic process | GO:0010604 | 405 | 0.049 | |
| organic substance catabolic process | GO:1901575 | 308 | 0.047 | |
| axonogenesis | GO:0007409 | 290 | 0.047 | |
| positive regulation of response to stimulus | GO:0048584 | 323 | 0.046 | |
| regulation of phosphate metabolic process | GO:0019220 | 210 | 0.046 | Yeast |
| endomembrane system organization | GO:0010256 | 119 | 0.045 | |
| regulation of response to stress | GO:0080134 | 200 | 0.045 | |
| regulation of neuron differentiation | GO:0045664 | 103 | 0.045 | |
| protein complex assembly | GO:0006461 | 200 | 0.044 | |
| intracellular transport | GO:0046907 | 228 | 0.043 | |
| regulation of anatomical structure morphogenesis | GO:0022603 | 242 | 0.043 | |
| response to bacterium | GO:0009617 | 198 | 0.043 | |
| cellular protein complex disassembly | GO:0043624 | 35 | 0.041 | |
| response to nutrient levels | GO:0031667 | 114 | 0.040 | |
| autophagic vacuole assembly | GO:0000045 | 2 | 0.040 | |
| regulation of cell differentiation | GO:0045595 | 302 | 0.040 | |
| taxis | GO:0042330 | 304 | 0.040 | |
| cytoplasmic transport | GO:0016482 | 130 | 0.039 | |
| regulation of cellular component biogenesis | GO:0044087 | 201 | 0.039 | |
| regulation of cellular amine metabolic process | GO:0033238 | 3 | 0.038 | Yeast |
| regulation of catalytic activity | GO:0050790 | 185 | 0.038 | |
| macromolecular complex assembly | GO:0065003 | 256 | 0.038 | |
| response to other organism | GO:0051707 | 293 | 0.037 | |
| imaginal disc fusion | GO:0046528 | 19 | 0.037 | |
| lateral inhibition | GO:0046331 | 206 | 0.036 | |
| regulation of neuron projection development | GO:0010975 | 69 | 0.036 | |
| response to starvation | GO:0042594 | 97 | 0.035 | |
| regulation of phosphorylation | GO:0042325 | 147 | 0.035 | |
| regulation of organelle organization | GO:0033043 | 196 | 0.035 | |
| response to extracellular stimulus | GO:0009991 | 116 | 0.034 | |
| detection of abiotic stimulus | GO:0009582 | 66 | 0.034 | |
| detection of stimulus | GO:0051606 | 156 | 0.033 | |
| catabolic process | GO:0009056 | 409 | 0.032 | |
| synapse organization | GO:0050808 | 196 | 0.032 | |
| regulation of cellular localization | GO:0060341 | 136 | 0.032 | |
| response to biotic stimulus | GO:0009607 | 294 | 0.032 | |
| single organism intracellular transport | GO:1902582 | 207 | 0.032 | |
| regulation of protein modification process | GO:0031399 | 112 | 0.031 | |
| regulation of autophagy | GO:0010506 | 62 | 0.031 | |
| small molecule metabolic process | GO:0044281 | 305 | 0.031 | Yeast |
| positive regulation of phosphorus metabolic process | GO:0010562 | 139 | 0.031 | Yeast |
| enzyme linked receptor protein signaling pathway | GO:0007167 | 179 | 0.031 | |
| regulation of protein metabolic process | GO:0051246 | 256 | 0.030 | |
| positive regulation of catalytic activity | GO:0043085 | 118 | 0.030 | |
| protein modification by small protein conjugation | GO:0032446 | 79 | 0.030 | |
| cellular response to nutrient levels | GO:0031669 | 62 | 0.030 | |
| negative regulation of nucleic acid templated transcription | GO:1903507 | 240 | 0.030 | |
| regulation of cell morphogenesis | GO:0022604 | 163 | 0.030 | |
| single organism catabolic process | GO:0044712 | 228 | 0.029 | |
| cellular macromolecule catabolic process | GO:0044265 | 136 | 0.029 | |
| intracellular protein transport | GO:0006886 | 104 | 0.029 | |
| phagocytosis | GO:0006909 | 215 | 0.029 | |
| embryonic development via the syncytial blastoderm | GO:0001700 | 148 | 0.029 | |
| endosome organization | GO:0007032 | 9 | 0.029 | |
| positive regulation of cell development | GO:0010720 | 61 | 0.028 | |
| positive regulation of biosynthetic process | GO:0009891 | 316 | 0.028 | Yeast |
| organelle assembly | GO:0070925 | 198 | 0.028 | |
| positive regulation of signaling | GO:0023056 | 243 | 0.028 | |
| chemical homeostasis | GO:0048878 | 92 | 0.028 | |
| stem cell differentiation | GO:0048863 | 117 | 0.027 | |
| mushroom body development | GO:0016319 | 70 | 0.027 | |
| organic acid metabolic process | GO:0006082 | 103 | 0.027 | |
| positive regulation of catabolic process | GO:0009896 | 105 | 0.026 | |
| chorion containing eggshell pattern formation | GO:0030381 | 11 | 0.026 | |
| organelle localization | GO:0051640 | 148 | 0.026 | |
| regulation of mapk cascade | GO:0043408 | 92 | 0.026 | |
| dendrite development | GO:0016358 | 204 | 0.026 | |
| regulation of cell morphogenesis involved in differentiation | GO:0010769 | 61 | 0.025 | |
| regulation of cellular response to stress | GO:0080135 | 89 | 0.025 | |
| dna replication | GO:0006260 | 48 | 0.025 | |
| heterocycle catabolic process | GO:0046700 | 166 | 0.025 | |
| stress activated protein kinase signaling cascade | GO:0031098 | 55 | 0.025 | |
| regulation of phosphorus metabolic process | GO:0051174 | 210 | 0.024 | Yeast |
| cellular protein complex assembly | GO:0043623 | 71 | 0.024 | |
| defense response to bacterium | GO:0042742 | 178 | 0.024 | |
| macromolecule catabolic process | GO:0009057 | 161 | 0.023 | |
| lipid localization | GO:0010876 | 54 | 0.023 | Yeast |
| negative regulation of macromolecule biosynthetic process | GO:0010558 | 270 | 0.023 | |
| single organism biosynthetic process | GO:0044711 | 206 | 0.023 | Yeast |
| cell adhesion | GO:0007155 | 136 | 0.022 | |
| positive regulation of cell communication | GO:0010647 | 250 | 0.022 | |
| positive regulation of developmental process | GO:0051094 | 143 | 0.022 | |
| positive regulation of protein modification process | GO:0031401 | 58 | 0.022 | |
| cell division | GO:0051301 | 248 | 0.022 | |
| cellular macromolecule localization | GO:0070727 | 220 | 0.022 | |
| positive regulation of lipid biosynthetic process | GO:0046889 | 3 | 0.021 | Yeast |
| embryonic morphogenesis | GO:0048598 | 206 | 0.021 | |
| endosomal transport | GO:0016197 | 44 | 0.021 | |
| defense response to other organism | GO:0098542 | 225 | 0.021 | |
| single organism cellular localization | GO:1902580 | 180 | 0.020 | |
| jnk cascade | GO:0007254 | 50 | 0.020 | |
| positive regulation of rna biosynthetic process | GO:1902680 | 266 | 0.020 | |
| regulation of cytoskeleton organization | GO:0051493 | 89 | 0.020 | |
| response to radiation | GO:0009314 | 155 | 0.020 | |
| positive regulation of macromolecule biosynthetic process | GO:0010557 | 283 | 0.020 | |
| epithelial cell differentiation | GO:0030855 | 322 | 0.020 | |
| immune system process | GO:0002376 | 347 | 0.020 | |
| positive regulation of nucleobase containing compound metabolic process | GO:0045935 | 332 | 0.020 | |
| death | GO:0016265 | 284 | 0.020 | |
| modification dependent protein catabolic process | GO:0019941 | 78 | 0.019 | |
| response to abiotic stimulus | GO:0009628 | 341 | 0.019 | |
| cellular protein catabolic process | GO:0044257 | 83 | 0.019 | |
| organelle fusion | GO:0048284 | 46 | 0.019 | |
| regulation of intracellular signal transduction | GO:1902531 | 236 | 0.019 | |
| regulation of cell projection organization | GO:0031344 | 92 | 0.019 | |
| stress activated mapk cascade | GO:0051403 | 52 | 0.019 | |
| positive regulation of cellular biosynthetic process | GO:0031328 | 316 | 0.019 | Yeast |
| regulation of cell shape | GO:0008360 | 113 | 0.019 | |
| response to endogenous stimulus | GO:0009719 | 119 | 0.019 | |
| organic substance transport | GO:0071702 | 257 | 0.018 | Yeast |
| regulation of transport | GO:0051049 | 181 | 0.018 | |
| cuticle pigmentation | GO:0048067 | 22 | 0.018 | |
| ras protein signal transduction | GO:0007265 | 88 | 0.018 | |
| positive regulation of cell migration | GO:0030335 | 2 | 0.018 | |
| positive regulation of cell motility | GO:2000147 | 3 | 0.018 | |
| muscle structure development | GO:0061061 | 224 | 0.018 | |
| positive regulation of neurogenesis | GO:0050769 | 41 | 0.018 | |
| regulation of catabolic process | GO:0009894 | 170 | 0.018 | |
| proteolysis involved in cellular protein catabolic process | GO:0051603 | 83 | 0.017 | |
| organelle fission | GO:0048285 | 340 | 0.017 | |
| mapk cascade | GO:0000165 | 107 | 0.017 | |
| ribonucleotide metabolic process | GO:0009259 | 145 | 0.017 | |
| dendrite morphogenesis | GO:0048813 | 199 | 0.017 | |
| muscle cell differentiation | GO:0042692 | 103 | 0.017 | |
| organophosphate catabolic process | GO:0046434 | 112 | 0.017 | |
| embryo development ending in birth or egg hatching | GO:0009792 | 152 | 0.017 | |
| cellular amino acid metabolic process | GO:0006520 | 61 | 0.017 | |
| protein phosphorylation | GO:0006468 | 169 | 0.017 | |
| positive regulation of signal transduction | GO:0009967 | 223 | 0.017 | |
| organic cyclic compound catabolic process | GO:1901361 | 168 | 0.017 | |
| regulation of cellular catabolic process | GO:0031329 | 157 | 0.017 | |
| cellular macromolecular complex assembly | GO:0034622 | 153 | 0.017 | |
| regulation of protein phosphorylation | GO:0001932 | 64 | 0.016 | |
| ethanolamine containing compound metabolic process | GO:0042439 | 4 | 0.016 | Yeast |
| cellular nitrogen compound catabolic process | GO:0044270 | 165 | 0.016 | |
| positive regulation of organelle organization | GO:0010638 | 65 | 0.016 | |
| negative regulation of cell cycle process | GO:0010948 | 109 | 0.016 | |
| regulation of adult chitin containing cuticle pigmentation | GO:0048082 | 13 | 0.016 | |
| negative regulation of biosynthetic process | GO:0009890 | 277 | 0.016 | |
| regulation of cellular component size | GO:0032535 | 98 | 0.016 | |
| carbohydrate derivative metabolic process | GO:1901135 | 217 | 0.016 | |
| regulation of apoptotic process | GO:0042981 | 130 | 0.015 | |
| protein modification by small protein conjugation or removal | GO:0070647 | 106 | 0.015 | |
| positive regulation of nitrogen compound metabolic process | GO:0051173 | 354 | 0.015 | Yeast |
| spindle organization | GO:0007051 | 253 | 0.015 | |
| carboxylic acid metabolic process | GO:0019752 | 92 | 0.015 | |
| positive regulation of phosphorylation | GO:0042327 | 87 | 0.015 | |
| purine ribonucleoside metabolic process | GO:0046128 | 127 | 0.015 | |
| rna localization | GO:0006403 | 115 | 0.015 | |
| nitrogen compound transport | GO:0071705 | 85 | 0.015 | |
| columnar cuboidal epithelial cell differentiation | GO:0002065 | 256 | 0.015 | |
| morphogenesis of an epithelium | GO:0002009 | 276 | 0.015 | |
| cellular amine metabolic process | GO:0044106 | 12 | 0.014 | Yeast |
| protein k48 linked ubiquitination | GO:0070936 | 3 | 0.014 | |
| secretion | GO:0046903 | 109 | 0.014 | |
| nucleobase containing small molecule metabolic process | GO:0055086 | 174 | 0.014 | |
| regulation of intracellular transport | GO:0032386 | 64 | 0.014 | |
| lipid metabolic process | GO:0006629 | 121 | 0.014 | Yeast |
| pigment biosynthetic process | GO:0046148 | 36 | 0.014 | |
| apoptotic process | GO:0006915 | 159 | 0.014 | |
| purine nucleotide metabolic process | GO:0006163 | 146 | 0.014 | |
| organic hydroxy compound metabolic process | GO:1901615 | 83 | 0.014 | Yeast |
| positive regulation of cell differentiation | GO:0045597 | 64 | 0.014 | |
| regulation of dendrite morphogenesis | GO:0048814 | 28 | 0.014 | |
| cell cell signaling involved in cell fate commitment | GO:0045168 | 210 | 0.014 | |
| organonitrogen compound metabolic process | GO:1901564 | 318 | 0.013 | Yeast |
| negative regulation of nitrogen compound metabolic process | GO:0051172 | 265 | 0.013 | |
| negative regulation of cell cycle | GO:0045786 | 116 | 0.013 | |
| mitotic spindle organization | GO:0007052 | 220 | 0.013 | |
| pigment metabolic process | GO:0042440 | 84 | 0.013 | |
| small gtpase mediated signal transduction | GO:0007264 | 88 | 0.013 | |
| regulation of jnk cascade | GO:0046328 | 40 | 0.013 | |
| negative regulation of response to stimulus | GO:0048585 | 258 | 0.013 | |
| proteolysis | GO:0006508 | 192 | 0.013 | |
| ribonucleotide catabolic process | GO:0009261 | 109 | 0.013 | |
| organonitrogen compound catabolic process | GO:1901565 | 128 | 0.013 | |
| regulation of protein localization | GO:0032880 | 76 | 0.013 | |
| urogenital system development | GO:0001655 | 72 | 0.013 | |
| ribonucleoside metabolic process | GO:0009119 | 127 | 0.013 | |
| negative regulation of cellular metabolic process | GO:0031324 | 382 | 0.012 | |
| modification dependent macromolecule catabolic process | GO:0043632 | 79 | 0.012 | |
| gland development | GO:0048732 | 191 | 0.012 | |
| response to organophosphorus | GO:0046683 | 2 | 0.012 | |
| regulation of stress activated protein kinase signaling cascade | GO:0070302 | 42 | 0.012 | |
| dorsal appendage formation | GO:0046843 | 47 | 0.012 | |
| positive regulation of gene expression | GO:0010628 | 290 | 0.012 | |
| gene silencing | GO:0016458 | 138 | 0.012 | |
| signal transduction by phosphorylation | GO:0023014 | 107 | 0.012 | |
| epithelial cell development | GO:0002064 | 274 | 0.012 | |
| macroautophagy | GO:0016236 | 42 | 0.012 | |
| cell projection assembly | GO:0030031 | 94 | 0.012 | |
| immune response regulating signaling pathway | GO:0002764 | 2 | 0.012 | |
| ribose phosphate metabolic process | GO:0019693 | 145 | 0.012 | |
| vesicle organization | GO:0016050 | 44 | 0.012 | |
| protein transmembrane transport | GO:0071806 | 4 | 0.012 | |
| detection of external stimulus | GO:0009581 | 66 | 0.012 | |
| nucleoside triphosphate catabolic process | GO:0009143 | 108 | 0.012 | |
| positive regulation of nervous system development | GO:0051962 | 69 | 0.012 | |
| guanosine containing compound catabolic process | GO:1901069 | 74 | 0.012 | |
| axon cargo transport | GO:0008088 | 29 | 0.012 | |
| protein ubiquitination | GO:0016567 | 70 | 0.012 | |
| cell death | GO:0008219 | 279 | 0.012 | |
| negative regulation of developmental process | GO:0051093 | 201 | 0.012 | |
| biological adhesion | GO:0022610 | 138 | 0.012 | |
| organic hydroxy compound catabolic process | GO:1901616 | 4 | 0.012 | |
| feeding behavior | GO:0007631 | 50 | 0.011 | |
| growth | GO:0040007 | 359 | 0.011 | |
| microtubule based movement | GO:0007018 | 51 | 0.011 | |
| lipid modification | GO:0030258 | 24 | 0.011 | |
| protein targeting to nucleus | GO:0044744 | 51 | 0.011 | |
| response to external biotic stimulus | GO:0043207 | 293 | 0.011 | |
| nucleoside phosphate catabolic process | GO:1901292 | 110 | 0.011 | |
| vacuole organization | GO:0007033 | 8 | 0.011 | |
| purine nucleoside metabolic process | GO:0042278 | 127 | 0.011 | |
| organophosphate metabolic process | GO:0019637 | 195 | 0.011 | Yeast |
| purine ribonucleotide metabolic process | GO:0009150 | 145 | 0.011 | |
| positive regulation of dendrite morphogenesis | GO:0050775 | 9 | 0.011 | |
| transmembrane receptor protein tyrosine kinase signaling pathway | GO:0007169 | 116 | 0.011 | |
| protein transport | GO:0015031 | 155 | 0.011 | |
| columnar cuboidal epithelial cell development | GO:0002066 | 249 | 0.011 | |
| small molecule catabolic process | GO:0044282 | 21 | 0.011 | |
| negative regulation of cellular macromolecule biosynthetic process | GO:2000113 | 267 | 0.011 | |
| positive regulation of phosphate metabolic process | GO:0045937 | 139 | 0.011 | Yeast |
| regulation of cytoplasmic transport | GO:1903649 | 47 | 0.011 | |
| retrograde transport endosome to golgi | GO:0042147 | 3 | 0.011 | |
| imaginal disc derived wing morphogenesis | GO:0007476 | 337 | 0.011 | |
| organic acid transport | GO:0015849 | 18 | 0.011 | |
| chromosome organization | GO:0051276 | 360 | 0.010 | |
| ion homeostasis | GO:0050801 | 55 | 0.010 | |
| neurological system process | GO:0050877 | 358 | 0.010 | |
| regulation of cell size | GO:0008361 | 63 | 0.010 | |
| positive regulation of cell morphogenesis involved in differentiation | GO:0010770 | 12 | 0.010 | |
| acylglycerol biosynthetic process | GO:0046463 | 2 | 0.010 | |
| positive regulation of purine nucleotide metabolic process | GO:1900544 | 55 | 0.010 | |
| programmed cell death | GO:0012501 | 257 | 0.010 | |
| imaginal disc pattern formation | GO:0007447 | 91 | 0.010 | |
| cellular component assembly involved in morphogenesis | GO:0010927 | 151 | 0.010 | |
| eye pigmentation | GO:0048069 | 43 | 0.010 | |
| signal release | GO:0023061 | 49 | 0.010 | |
| wing disc morphogenesis | GO:0007472 | 344 | 0.010 | |
