| internal protein amino acid acetylation | GO:0006475 | 38 | 0.496 | |
| chromatin organization | GO:0006325 | 207 | 0.390 | |
| chromosome organization | GO:0051276 | 360 | 0.379 | |
| protein acetylation | GO:0006473 | 39 | 0.267 | |
| histone modification | GO:0016570 | 106 | 0.225 | |
| transcription from rna polymerase ii promoter | GO:0006366 | 368 | 0.209 | |
| steroid biosynthetic process | GO:0006694 | 16 | 0.195 | |
| histone acetylation | GO:0016573 | 38 | 0.176 | |
| protein acylation | GO:0043543 | 42 | 0.161 | |
| covalent chromatin modification | GO:0016569 | 106 | 0.160 | |
| chromatin remodeling | GO:0006338 | 72 | 0.145 | |
| positive regulation of macromolecule metabolic process | GO:0010604 | 405 | 0.144 | Fly |
| single organism biosynthetic process | GO:0044711 | 206 | 0.134 | |
| regulation of mitotic cell cycle phase transition | GO:1901990 | 130 | 0.134 | |
| chromatin modification | GO:0016568 | 147 | 0.129 | |
| negative regulation of cellular biosynthetic process | GO:0031327 | 277 | 0.126 | |
| rna processing | GO:0006396 | 147 | 0.124 | |
| morphogenesis of an epithelium | GO:0002009 | 276 | 0.121 | |
| small molecule biosynthetic process | GO:0044283 | 37 | 0.113 | |
| regulation of cellular protein metabolic process | GO:0032268 | 243 | 0.113 | Fly |
| small molecule metabolic process | GO:0044281 | 305 | 0.112 | |
| internal peptidyl lysine acetylation | GO:0018393 | 38 | 0.110 | |
| protein dna complex assembly | GO:0065004 | 63 | 0.109 | |
| positive regulation of response to stimulus | GO:0048584 | 323 | 0.101 | |
| regulation of protein metabolic process | GO:0051246 | 256 | 0.100 | Fly |
| cellular protein modification process | GO:0006464 | 438 | 0.095 | |
| negative regulation of gene expression epigenetic | GO:0045814 | 77 | 0.095 | |
| protein modification process | GO:0036211 | 438 | 0.095 | |
| male gamete generation | GO:0048232 | 201 | 0.095 | |
| cellular ketone metabolic process | GO:0042180 | 24 | 0.087 | |
| hormone biosynthetic process | GO:0042446 | 20 | 0.083 | |
| regulation of mitotic cell cycle | GO:0007346 | 190 | 0.080 | |
| gene silencing | GO:0016458 | 138 | 0.076 | |
| dendrite development | GO:0016358 | 204 | 0.073 | |
| positive regulation of mitotic cell cycle phase transition | GO:1901992 | 20 | 0.071 | |
| negative regulation of cell cycle | GO:0045786 | 116 | 0.071 | |
| alcohol metabolic process | GO:0006066 | 25 | 0.070 | |
| peptidyl lysine acetylation | GO:0018394 | 39 | 0.069 | |
| organic hydroxy compound metabolic process | GO:1901615 | 83 | 0.067 | |
| mitotic g2 dna damage checkpoint | GO:0007095 | 69 | 0.066 | |
| regulation of anatomical structure morphogenesis | GO:0022603 | 242 | 0.065 | |
| cellular response to dna damage stimulus | GO:0006974 | 223 | 0.064 | |
| sterol biosynthetic process | GO:0016126 | 9 | 0.063 | |
| protein catabolic process | GO:0030163 | 101 | 0.062 | |
| organic substance catabolic process | GO:1901575 | 308 | 0.061 | |
| dendrite morphogenesis | GO:0048813 | 199 | 0.060 | |
| regulation of cell cycle | GO:0051726 | 291 | 0.058 | |
| columnar cuboidal epithelial cell development | GO:0002066 | 249 | 0.056 | |
| alcohol biosynthetic process | GO:0046165 | 14 | 0.055 | |
| lipid metabolic process | GO:0006629 | 121 | 0.053 | |
| regulation of rna splicing | GO:0043484 | 69 | 0.052 | |
| negative regulation of biosynthetic process | GO:0009890 | 277 | 0.052 | |
| spermatogenesis | GO:0007283 | 200 | 0.051 | |
| histone h3 acetylation | GO:0043966 | 11 | 0.049 | |
| cellular macromolecule catabolic process | GO:0044265 | 136 | 0.049 | |
| localization of cell | GO:0051674 | 257 | 0.048 | |
| rna splicing | GO:0008380 | 83 | 0.047 | |
| ameboidal type cell migration | GO:0001667 | 151 | 0.047 | |
| regulation of growth | GO:0040008 | 233 | 0.047 | |
| golgi organization | GO:0007030 | 66 | 0.046 | |
| peptidyl lysine modification | GO:0018205 | 57 | 0.046 | |
| catabolic process | GO:0009056 | 409 | 0.046 | |
| positive regulation of organelle organization | GO:0010638 | 65 | 0.045 | Fly |
| cell cycle phase transition | GO:0044770 | 140 | 0.045 | |
| regulation of cell cycle phase transition | GO:1901987 | 130 | 0.044 | |
| ketone biosynthetic process | GO:0042181 | 16 | 0.044 | |
| regulation of gene expression epigenetic | GO:0040029 | 128 | 0.044 | |
| g2 dna damage checkpoint | GO:0031572 | 69 | 0.044 | |
| synaptic growth at neuromuscular junction | GO:0051124 | 119 | 0.043 | |
| regulation of organelle organization | GO:0033043 | 196 | 0.043 | Fly |
| columnar cuboidal epithelial cell differentiation | GO:0002065 | 256 | 0.042 | |
| modification dependent macromolecule catabolic process | GO:0043632 | 79 | 0.042 | |
| negative regulation of rna metabolic process | GO:0051253 | 251 | 0.042 | |
| cellular nitrogen compound catabolic process | GO:0044270 | 165 | 0.041 | |
| positive regulation of gene expression | GO:0010628 | 290 | 0.041 | |
| macromolecular complex assembly | GO:0065003 | 256 | 0.040 | |
| negative regulation of nitrogen compound metabolic process | GO:0051172 | 265 | 0.040 | |
| lipid biosynthetic process | GO:0008610 | 46 | 0.040 | |
| chromosome separation | GO:0051304 | 42 | 0.039 | |
| positive regulation of biosynthetic process | GO:0009891 | 316 | 0.039 | |
| negative regulation of cellular macromolecule biosynthetic process | GO:2000113 | 267 | 0.039 | |
| positive regulation of protein metabolic process | GO:0051247 | 128 | 0.038 | Fly |
| imaginal disc derived appendage morphogenesis | GO:0035114 | 395 | 0.038 | |
| chromatin assembly or disassembly | GO:0006333 | 52 | 0.038 | |
| single organism catabolic process | GO:0044712 | 228 | 0.037 | |
| regulation of cell cycle process | GO:0010564 | 181 | 0.037 | |
| peptidyl amino acid modification | GO:0018193 | 105 | 0.036 | |
| positive regulation of cellular component organization | GO:0051130 | 156 | 0.036 | Fly |
| positive regulation of cellular biosynthetic process | GO:0031328 | 316 | 0.035 | |
| negative regulation of cellular metabolic process | GO:0031324 | 382 | 0.035 | |
| regulation of proteasomal ubiquitin dependent protein catabolic process | GO:0032434 | 37 | 0.034 | |
| organelle assembly | GO:0070925 | 198 | 0.034 | |
| cell division | GO:0051301 | 248 | 0.033 | |
| positive regulation of cell communication | GO:0010647 | 250 | 0.032 | |
| negative regulation of cell cycle process | GO:0010948 | 109 | 0.032 | |
| chromatin assembly | GO:0031497 | 48 | 0.032 | |
| positive regulation of signaling | GO:0023056 | 243 | 0.032 | |
| endomembrane system organization | GO:0010256 | 119 | 0.031 | |
| sterol metabolic process | GO:0016125 | 12 | 0.031 | |
| regulation of multicellular organismal development | GO:2000026 | 414 | 0.031 | |
| regulation of metaphase anaphase transition of cell cycle | GO:1902099 | 26 | 0.030 | |
| rna 3 end processing | GO:0031123 | 45 | 0.030 | |
| cellular macromolecular complex assembly | GO:0034622 | 153 | 0.030 | |
| cellularization | GO:0007349 | 90 | 0.030 | |
| organic hydroxy compound biosynthetic process | GO:1901617 | 21 | 0.029 | |
| regulation of mitotic metaphase anaphase transition | GO:0030071 | 26 | 0.029 | |
| mitotic cell cycle phase transition | GO:0044772 | 138 | 0.028 | |
| negative regulation of cell cycle phase transition | GO:1901988 | 103 | 0.028 | |
| compound eye development | GO:0048749 | 307 | 0.028 | |
| negative regulation of gene expression | GO:0010629 | 387 | 0.028 | |
| proteasome mediated ubiquitin dependent protein catabolic process | GO:0043161 | 54 | 0.028 | |
| positive regulation of catalytic activity | GO:0043085 | 118 | 0.028 | |
| negative regulation of nucleic acid templated transcription | GO:1903507 | 240 | 0.028 | |
| regulation of cellular catabolic process | GO:0031329 | 157 | 0.028 | |
| anatomical structure homeostasis | GO:0060249 | 97 | 0.027 | |
| steroid metabolic process | GO:0008202 | 20 | 0.027 | |
| appendage development | GO:0048736 | 401 | 0.027 | |
| eye morphogenesis | GO:0048592 | 260 | 0.027 | |
| positive regulation of mitotic cell cycle | GO:0045931 | 34 | 0.026 | |
| mitotic sister chromatid separation | GO:0051306 | 30 | 0.026 | |
| cellular hormone metabolic process | GO:0034754 | 23 | 0.025 | |
| positive regulation of nitrogen compound metabolic process | GO:0051173 | 354 | 0.025 | |
| ecdysteroid biosynthetic process | GO:0045456 | 15 | 0.025 | |
| nucleosome organization | GO:0034728 | 59 | 0.025 | |
| positive regulation of cell cycle phase transition | GO:1901989 | 20 | 0.025 | |
| negative regulation of nucleobase containing compound metabolic process | GO:0045934 | 261 | 0.024 | |
| dna packaging | GO:0006323 | 91 | 0.024 | |
| regulation of mitotic sister chromatid segregation | GO:0033047 | 28 | 0.024 | |
| regulation of response to stress | GO:0080134 | 200 | 0.024 | |
| phagocytosis | GO:0006909 | 215 | 0.024 | |
| secretion | GO:0046903 | 109 | 0.024 | |
| eye development | GO:0001654 | 323 | 0.024 | |
| wnt signaling pathway | GO:0016055 | 98 | 0.024 | |
| protein localization | GO:0008104 | 284 | 0.023 | |
| protein complex assembly | GO:0006461 | 200 | 0.023 | |
| regulation of transcription from rna polymerase ii promoter | GO:0006357 | 378 | 0.023 | |
| positive regulation of nucleic acid templated transcription | GO:1903508 | 266 | 0.023 | |
| imaginal disc derived leg morphogenesis | GO:0007480 | 80 | 0.023 | |
| compound eye morphogenesis | GO:0001745 | 249 | 0.023 | |
| regulation of chromatin silencing | GO:0031935 | 36 | 0.023 | |
| protein dna complex subunit organization | GO:0071824 | 86 | 0.023 | |
| regulation of organ morphogenesis | GO:2000027 | 78 | 0.023 | |
| negative regulation of macromolecule biosynthetic process | GO:0010558 | 270 | 0.022 | |
| leg disc development | GO:0035218 | 92 | 0.022 | |
| carbohydrate derivative metabolic process | GO:1901135 | 217 | 0.022 | |
| organonitrogen compound metabolic process | GO:1901564 | 318 | 0.022 | |
| positive regulation of rna metabolic process | GO:0051254 | 271 | 0.022 | |
| mitotic sister chromatid segregation | GO:0000070 | 87 | 0.022 | |
| single organism behavior | GO:0044708 | 391 | 0.021 | |
| proteasomal protein catabolic process | GO:0010498 | 59 | 0.021 | |
| regulation of catabolic process | GO:0009894 | 170 | 0.021 | |
| positive regulation of cell death | GO:0010942 | 69 | 0.021 | |
| regulation of mitosis | GO:0007088 | 56 | 0.021 | |
| cytoplasmic transport | GO:0016482 | 130 | 0.021 | |
| ovarian follicle cell development | GO:0030707 | 248 | 0.020 | |
| ubiquitin dependent protein catabolic process | GO:0006511 | 78 | 0.020 | |
| regulation of catalytic activity | GO:0050790 | 185 | 0.020 | |
| heterocycle catabolic process | GO:0046700 | 166 | 0.020 | |
| epithelial cell differentiation | GO:0030855 | 322 | 0.020 | |
| programmed cell death | GO:0012501 | 257 | 0.020 | |
| protein complex biogenesis | GO:0070271 | 201 | 0.020 | |
| cellular catabolic process | GO:0044248 | 372 | 0.020 | |
| post embryonic appendage morphogenesis | GO:0035120 | 385 | 0.020 | |
| regulation of alternative mrna splicing via spliceosome | GO:0000381 | 60 | 0.019 | |
| negative regulation of transcription dna templated | GO:0045892 | 237 | 0.019 | |
| positive regulation of signal transduction | GO:0009967 | 223 | 0.019 | |
| organonitrogen compound biosynthetic process | GO:1901566 | 117 | 0.019 | |
| chemical homeostasis | GO:0048878 | 92 | 0.019 | |
| homeostatic process | GO:0042592 | 199 | 0.019 | |
| response to gamma radiation | GO:0010332 | 17 | 0.018 | |
| posttranscriptional gene silencing by rna | GO:0035194 | 45 | 0.018 | |
| regulation of chromosome organization | GO:0033044 | 64 | 0.018 | Fly |
| sleep | GO:0030431 | 49 | 0.018 | |
| microtubule organizing center organization | GO:0031023 | 168 | 0.018 | |
| positive regulation of transcription dna templated | GO:0045893 | 266 | 0.018 | |
| rna catabolic process | GO:0006401 | 37 | 0.018 | |
| imaginal disc derived appendage development | GO:0048737 | 399 | 0.018 | |
| mitotic g2 m transition checkpoint | GO:0044818 | 70 | 0.017 | |
| rhythmic behavior | GO:0007622 | 76 | 0.017 | |
| dna conformation change | GO:0071103 | 105 | 0.017 | |
| regulation of sister chromatid segregation | GO:0033045 | 28 | 0.017 | |
| retina development in camera type eye | GO:0060041 | 4 | 0.017 | |
| dna integrity checkpoint | GO:0031570 | 81 | 0.017 | |
| chaeta development | GO:0022416 | 97 | 0.017 | |
| regulation of molecular function | GO:0065009 | 217 | 0.017 | |
| chromatin silencing | GO:0006342 | 76 | 0.017 | |
| purine nucleoside catabolic process | GO:0006152 | 112 | 0.017 | |
| neuromuscular junction development | GO:0007528 | 149 | 0.017 | |
| regulation of proteolysis | GO:0030162 | 87 | 0.016 | |
| actin filament based process | GO:0030029 | 220 | 0.016 | |
| aromatic compound catabolic process | GO:0019439 | 166 | 0.016 | |
| proteolysis involved in cellular protein catabolic process | GO:0051603 | 83 | 0.016 | |
| nuclear division | GO:0000280 | 332 | 0.016 | |
| hormone metabolic process | GO:0042445 | 33 | 0.016 | |
| positive regulation of proteolysis | GO:0045862 | 52 | 0.016 | |
| epithelial cell migration open tracheal system | GO:0007427 | 32 | 0.016 | |
| cell death | GO:0008219 | 279 | 0.015 | |
| regulation of cell division | GO:0051302 | 72 | 0.015 | |
| establishment of tissue polarity | GO:0007164 | 87 | 0.015 | |
| response to radiation | GO:0009314 | 155 | 0.015 | |
| mrna processing | GO:0006397 | 104 | 0.015 | |
| multicellular organism growth | GO:0035264 | 46 | 0.015 | |
| positive regulation of rna biosynthetic process | GO:1902680 | 266 | 0.015 | |
| endocytosis | GO:0006897 | 310 | 0.015 | |
| positive regulation of cellular amine metabolic process | GO:0033240 | 0 | 0.015 | |
| cation transport | GO:0006812 | 110 | 0.015 | |
| tissue morphogenesis | GO:0048729 | 297 | 0.015 | |
| negative regulation of mitotic cell cycle phase transition | GO:1901991 | 103 | 0.015 | |
| nucleotide metabolic process | GO:0009117 | 161 | 0.014 | |
| negative regulation of mitotic cell cycle | GO:0045930 | 109 | 0.014 | |
| organic cyclic compound catabolic process | GO:1901361 | 168 | 0.014 | |
| establishment of localization in cell | GO:0051649 | 402 | 0.014 | |
| regulation of intracellular signal transduction | GO:1902531 | 236 | 0.014 | |
| negative regulation of transcription from rna polymerase ii promoter | GO:0000122 | 119 | 0.014 | |
| intracellular signal transduction | GO:0035556 | 300 | 0.014 | |
| modification dependent protein catabolic process | GO:0019941 | 78 | 0.014 | |
| positive regulation of hydrolase activity | GO:0051345 | 78 | 0.014 | |
| regulation of nuclear division | GO:0051783 | 58 | 0.013 | |
| enzyme linked receptor protein signaling pathway | GO:0007167 | 179 | 0.013 | |
| regulation of gene silencing | GO:0060968 | 63 | 0.013 | |
| glycosyl compound catabolic process | GO:1901658 | 112 | 0.013 | |
| ribonucleotide metabolic process | GO:0009259 | 145 | 0.013 | |
| metaphase anaphase transition of cell cycle | GO:0044784 | 28 | 0.013 | |
| imaginal disc derived wing morphogenesis | GO:0007476 | 337 | 0.013 | |
| establishment or maintenance of apical basal cell polarity | GO:0035088 | 34 | 0.013 | |
| regulation of protein catabolic process | GO:0042176 | 55 | 0.013 | |
| regulation of synapse assembly | GO:0051963 | 94 | 0.013 | |
| positive regulation of catabolic process | GO:0009896 | 105 | 0.013 | |
| regulation of hydrolase activity | GO:0051336 | 97 | 0.013 | |
| protein modification by small protein removal | GO:0070646 | 28 | 0.013 | |
| ras protein signal transduction | GO:0007265 | 88 | 0.013 | |
| regulation of cell differentiation | GO:0045595 | 302 | 0.013 | |
| negative regulation of developmental process | GO:0051093 | 201 | 0.012 | |
| dna damage checkpoint | GO:0000077 | 78 | 0.012 | |
| histolysis | GO:0007559 | 102 | 0.012 | |
| central nervous system development | GO:0007417 | 201 | 0.012 | |
| sperm individualization | GO:0007291 | 48 | 0.012 | |
| positive regulation of programmed cell death | GO:0043068 | 62 | 0.012 | |
| cellular lipid metabolic process | GO:0044255 | 83 | 0.012 | |
| sensory organ morphogenesis | GO:0090596 | 260 | 0.012 | |
| humoral immune response | GO:0006959 | 117 | 0.012 | |
| regulation of epithelial cell differentiation | GO:0030856 | 4 | 0.012 | |
| positive regulation of phosphate metabolic process | GO:0045937 | 139 | 0.012 | |
| purine ribonucleoside metabolic process | GO:0046128 | 127 | 0.012 | |
| salivary gland cell autophagic cell death | GO:0035071 | 83 | 0.011 | |
| anaphase promoting complex dependent proteasomal ubiquitin dependent protein catabolic process | GO:0031145 | 30 | 0.011 | |
| proteolysis | GO:0006508 | 192 | 0.011 | |
| autophagic cell death | GO:0048102 | 83 | 0.011 | |
| organophosphate metabolic process | GO:0019637 | 195 | 0.011 | |
| negative regulation of growth | GO:0045926 | 84 | 0.011 | |
| regulation of hormone levels | GO:0010817 | 40 | 0.011 | |
| positive regulation of molecular function | GO:0044093 | 136 | 0.011 | |
| nucleobase containing compound catabolic process | GO:0034655 | 165 | 0.011 | |
| response to biotic stimulus | GO:0009607 | 294 | 0.011 | |
| vesicle mediated transport | GO:0016192 | 381 | 0.011 | |
| macromolecule catabolic process | GO:0009057 | 161 | 0.011 | |
| protein modification by small protein conjugation or removal | GO:0070647 | 106 | 0.011 | |
| wing disc morphogenesis | GO:0007472 | 344 | 0.011 | |
| positive regulation of proteasomal ubiquitin dependent protein catabolic process | GO:0032436 | 19 | 0.011 | |
| regulation of cellular amino acid metabolic process | GO:0006521 | 0 | 0.011 | |
| mitotic dna damage checkpoint | GO:0044773 | 74 | 0.011 | |
| regulation of localization | GO:0032879 | 275 | 0.011 | |
| organic substance transport | GO:0071702 | 257 | 0.010 | |
| positive regulation of nucleobase containing compound metabolic process | GO:0045935 | 332 | 0.010 | |
| regulation of mitotic sister chromatid separation | GO:0010965 | 28 | 0.010 | |
| positive regulation of wnt signaling pathway | GO:0030177 | 25 | 0.010 | |
| regulation of multi organism process | GO:0043900 | 131 | 0.010 | |
| regionalization | GO:0003002 | 416 | 0.010 | Fly |
| regulation of wnt signaling pathway | GO:0030111 | 68 | 0.010 | |
| regulation of chromosome segregation | GO:0051983 | 32 | 0.010 | |
| gene silencing by mirna | GO:0035195 | 22 | 0.010 | |
| positive regulation of gtp catabolic process | GO:0033126 | 43 | 0.010 | |
| nephron development | GO:0072006 | 3 | 0.010 | |
| amide biosynthetic process | GO:0043604 | 42 | 0.010 | |
| sister chromatid segregation | GO:0000819 | 92 | 0.010 | |
| photoreceptor cell differentiation | GO:0046530 | 170 | 0.010 | |
| embryo development ending in birth or egg hatching | GO:0009792 | 152 | 0.010 | |
| negative regulation of response to stimulus | GO:0048585 | 258 | 0.010 | |
| regulation of response to external stimulus | GO:0032101 | 115 | 0.010 | |
| morphogenesis of a polarized epithelium | GO:0001738 | 93 | 0.010 | |
| eggshell formation | GO:0030703 | 105 | 0.010 | |
| regulation of notch signaling pathway | GO:0008593 | 100 | 0.010 | |
| posttranscriptional regulation of gene expression | GO:0010608 | 145 | 0.010 | |