| mitochondrion organization | GO:0007005 | 65 | 0.075 | |
| response to abiotic stimulus | GO:0009628 | 341 | 0.074 | |
| cytoplasmic transport | GO:0016482 | 130 | 0.070 | |
| sulfur compound metabolic process | GO:0006790 | 59 | 0.067 | |
| oxoacid metabolic process | GO:0043436 | 103 | 0.054 | |
| small molecule metabolic process | GO:0044281 | 305 | 0.053 | |
| single organism cellular localization | GO:1902580 | 180 | 0.051 | |
| organic substance transport | GO:0071702 | 257 | 0.048 | |
| intracellular transport | GO:0046907 | 228 | 0.045 | |
| protein modification process | GO:0036211 | 438 | 0.040 | |
| establishment of localization in cell | GO:0051649 | 402 | 0.040 | |
| protein transport | GO:0015031 | 155 | 0.038 | |
| mitochondrial transport | GO:0006839 | 8 | 0.038 | |
| cellular macromolecule localization | GO:0070727 | 220 | 0.037 | |
| organic acid metabolic process | GO:0006082 | 103 | 0.036 | |
| cellular protein modification process | GO:0006464 | 438 | 0.034 | |
| intracellular protein transport | GO:0006886 | 104 | 0.034 | |
| organonitrogen compound metabolic process | GO:1901564 | 318 | 0.031 | |
| cellular amino acid metabolic process | GO:0006520 | 61 | 0.031 | |
| establishment of protein localization | GO:0045184 | 163 | 0.031 | |
| protein localization | GO:0008104 | 284 | 0.028 | |
| carboxylic acid metabolic process | GO:0019752 | 92 | 0.027 | |
| cellular protein localization | GO:0034613 | 160 | 0.027 | |
| body morphogenesis | GO:0010171 | 2 | 0.026 | |
| ion transport | GO:0006811 | 145 | 0.025 | |
| protein targeting | GO:0006605 | 64 | 0.024 | |
| positive regulation of signaling | GO:0023056 | 243 | 0.024 | |
| cellular modified amino acid metabolic process | GO:0006575 | 45 | 0.024 | |
| response to oxygen containing compound | GO:1901700 | 200 | 0.024 | |
| protein localization to organelle | GO:0033365 | 82 | 0.022 | |
| regulation of molecular function | GO:0065009 | 217 | 0.021 | |
| response to organic substance | GO:0010033 | 284 | 0.021 | |
| spindle organization | GO:0007051 | 253 | 0.021 | |
| macromolecular complex assembly | GO:0065003 | 256 | 0.020 | |
| cellular amide metabolic process | GO:0043603 | 80 | 0.020 | |
| regulation of cell cycle | GO:0051726 | 291 | 0.019 | |
| regulation of catalytic activity | GO:0050790 | 185 | 0.019 | |
| carbohydrate metabolic process | GO:0005975 | 82 | 0.019 | |
| endocytosis | GO:0006897 | 310 | 0.019 | |
| organic substance catabolic process | GO:1901575 | 308 | 0.019 | |
| positive regulation of cell communication | GO:0010647 | 250 | 0.018 | |
| response to other organism | GO:0051707 | 293 | 0.018 | |
| positive regulation of signal transduction | GO:0009967 | 223 | 0.018 | |
| pigment metabolic process | GO:0042440 | 84 | 0.017 | |
| response to temperature stimulus | GO:0009266 | 106 | 0.017 | |
| vesicle mediated transport | GO:0016192 | 381 | 0.017 | |
| cellular catabolic process | GO:0044248 | 372 | 0.017 | |
| transcription from rna polymerase ii promoter | GO:0006366 | 368 | 0.017 | |
| catabolic process | GO:0009056 | 409 | 0.016 | |
| homeostatic process | GO:0042592 | 199 | 0.016 | |
| phosphorylation | GO:0016310 | 294 | 0.016 | |
| central nervous system development | GO:0007417 | 201 | 0.016 | |
| acyl coa metabolic process | GO:0006637 | 3 | 0.016 | |
| regulation of localization | GO:0032879 | 275 | 0.016 | |
| regulation of transport | GO:0051049 | 181 | 0.016 | |
| regionalization | GO:0003002 | 416 | 0.016 | |
| organonitrogen compound catabolic process | GO:1901565 | 128 | 0.016 | |
| response to heat | GO:0009408 | 63 | 0.016 | |
| regulation of transcription from rna polymerase ii promoter | GO:0006357 | 378 | 0.016 | |
| axon development | GO:0061564 | 297 | 0.015 | |
| oocyte differentiation | GO:0009994 | 145 | 0.015 | |
| taxis | GO:0042330 | 304 | 0.015 | |
| single organism catabolic process | GO:0044712 | 228 | 0.015 | |
| response to nutrient levels | GO:0031667 | 114 | 0.015 | |
| response to extracellular stimulus | GO:0009991 | 116 | 0.015 | |
| cellular response to chemical stimulus | GO:0070887 | 199 | 0.015 | |
| lateral inhibition | GO:0046331 | 206 | 0.015 | |
| positive regulation of response to stimulus | GO:0048584 | 323 | 0.015 | |
| protein complex biogenesis | GO:0070271 | 201 | 0.015 | |
| peptide metabolic process | GO:0006518 | 80 | 0.015 | |
| regulation of multicellular organismal development | GO:2000026 | 414 | 0.015 | |
| nucleoside metabolic process | GO:0009116 | 127 | 0.015 | |
| carbohydrate derivative metabolic process | GO:1901135 | 217 | 0.015 | |
| carbohydrate derivative biosynthetic process | GO:1901137 | 85 | 0.014 | |
| positive regulation of molecular function | GO:0044093 | 136 | 0.014 | |
| nitrogen compound transport | GO:0071705 | 85 | 0.014 | |
| phagocytosis | GO:0006909 | 215 | 0.014 | |
| response to biotic stimulus | GO:0009607 | 294 | 0.014 | |
| glutathione metabolic process | GO:0006749 | 37 | 0.014 | |
| pyridine containing compound metabolic process | GO:0072524 | 3 | 0.014 | |
| regulation of cellular localization | GO:0060341 | 136 | 0.014 | |
| negative regulation of cellular metabolic process | GO:0031324 | 382 | 0.014 | |
| nucleobase containing compound transport | GO:0015931 | 56 | 0.014 | |
| negative regulation of gene expression | GO:0010629 | 387 | 0.013 | |
| transmembrane transport | GO:0055085 | 139 | 0.013 | |
| single organism biosynthetic process | GO:0044711 | 206 | 0.013 | |
| pigmentation | GO:0043473 | 75 | 0.013 | |
| neuron projection guidance | GO:0097485 | 241 | 0.013 | |
| death | GO:0016265 | 284 | 0.013 | |
| respiratory system development | GO:0060541 | 213 | 0.013 | |
| mitotic spindle organization | GO:0007052 | 220 | 0.013 | |
| organophosphate metabolic process | GO:0019637 | 195 | 0.013 | |
| neurological system process | GO:0050877 | 358 | 0.013 | |
| positive regulation of catalytic activity | GO:0043085 | 118 | 0.013 | |
| ion transmembrane transport | GO:0034220 | 122 | 0.013 | |
| protein targeting to mitochondrion | GO:0006626 | 1 | 0.013 | |
| regulation of immune system process | GO:0002682 | 176 | 0.013 | |
| positive regulation of rna biosynthetic process | GO:1902680 | 266 | 0.012 | |
| cellular response to dna damage stimulus | GO:0006974 | 223 | 0.012 | |
| response to decreased oxygen levels | GO:0036293 | 58 | 0.012 | |
| rna localization | GO:0006403 | 115 | 0.012 | |
| nucleoside phosphate metabolic process | GO:0006753 | 162 | 0.012 | |
| rna processing | GO:0006396 | 147 | 0.012 | |
| purine ribonucleoside metabolic process | GO:0046128 | 127 | 0.012 | |
| oocyte axis specification | GO:0007309 | 108 | 0.012 | |
| eye pigment biosynthetic process | GO:0006726 | 32 | 0.012 | |
| intracellular signal transduction | GO:0035556 | 300 | 0.012 | |
| cellular nitrogen compound catabolic process | GO:0044270 | 165 | 0.012 | |
| chromatin organization | GO:0006325 | 207 | 0.012 | |
| positive regulation of nitrogen compound metabolic process | GO:0051173 | 354 | 0.012 | |
| chromosome organization | GO:0051276 | 360 | 0.012 | |
| forebrain development | GO:0030900 | 2 | 0.012 | |
| ribose phosphate metabolic process | GO:0019693 | 145 | 0.012 | |
| gland development | GO:0048732 | 191 | 0.012 | |
| nucleotide metabolic process | GO:0009117 | 161 | 0.012 | |
| response to organophosphorus | GO:0046683 | 2 | 0.011 | |
| developmental pigmentation | GO:0048066 | 68 | 0.011 | |
| purine nucleoside metabolic process | GO:0042278 | 127 | 0.011 | |
| protein complex assembly | GO:0006461 | 200 | 0.011 | |
| glycoprotein metabolic process | GO:0009100 | 41 | 0.011 | |
| purine containing compound metabolic process | GO:0072521 | 155 | 0.011 | |
| negative regulation of signal transduction | GO:0009968 | 206 | 0.011 | |
| organonitrogen compound biosynthetic process | GO:1901566 | 117 | 0.011 | |
| xenobiotic catabolic process | GO:0042178 | 1 | 0.011 | |
| response to hypoxia | GO:0001666 | 53 | 0.011 | |
| retina development in camera type eye | GO:0060041 | 4 | 0.011 | |
| protein glycosylation | GO:0006486 | 32 | 0.011 | |
| amine metabolic process | GO:0009308 | 12 | 0.011 | |
| regulation of cell death | GO:0010941 | 173 | 0.011 | |
| positive regulation of cell migration | GO:0030335 | 2 | 0.011 | |
| negative regulation of nucleic acid templated transcription | GO:1903507 | 240 | 0.011 | |
| chaeta development | GO:0022416 | 97 | 0.011 | |
| regulation of nervous system development | GO:0051960 | 248 | 0.010 | |
| regulation of cellular protein metabolic process | GO:0032268 | 243 | 0.010 | |
| regulation of multi organism process | GO:0043900 | 131 | 0.010 | |
| single organism intracellular transport | GO:1902582 | 207 | 0.010 | |
| metal ion homeostasis | GO:0055065 | 44 | 0.010 | |
| cellular macromolecular complex assembly | GO:0034622 | 153 | 0.010 | |
| regulation of cellular component biogenesis | GO:0044087 | 201 | 0.010 | |
| single organism carbohydrate metabolic process | GO:0044723 | 72 | 0.010 | |
| brain development | GO:0007420 | 120 | 0.010 | |
| negative regulation of cell communication | GO:0010648 | 223 | 0.010 | |
| positive regulation of lipid metabolic process | GO:0045834 | 4 | 0.010 | |
| response to starvation | GO:0042594 | 97 | 0.010 | |
| regulation of anatomical structure morphogenesis | GO:0022603 | 242 | 0.010 | |