| nuclear division | GO:0000280 | 332 | 0.691 | |
| organelle fission | GO:0048285 | 340 | 0.677 | |
| g2 dna damage checkpoint | GO:0031572 | 69 | 0.636 | |
| cell division | GO:0051301 | 248 | 0.433 | |
| regulation of organelle organization | GO:0033043 | 196 | 0.405 | |
| rna splicing via transesterification reactions | GO:0000375 | 73 | 0.396 | |
| protein modification process | GO:0036211 | 438 | 0.346 | |
| cell proliferation | GO:0008283 | 299 | 0.326 | |
| macromolecular complex assembly | GO:0065003 | 256 | 0.275 | |
| negative regulation of cell cycle | GO:0045786 | 116 | 0.259 | |
| regulation of cell cycle | GO:0051726 | 291 | 0.258 | |
| meiotic cell cycle | GO:0051321 | 171 | 0.232 | |
| transcription from rna polymerase ii promoter | GO:0006366 | 368 | 0.210 | |
| meiotic nuclear division | GO:0007126 | 151 | 0.206 | |
| positive regulation of phosphate metabolic process | GO:0045937 | 139 | 0.202 | |
| regulation of ras protein signal transduction | GO:0046578 | 93 | 0.200 | |
| mitotic cell cycle checkpoint | GO:0007093 | 88 | 0.194 | |
| phosphorylation | GO:0016310 | 294 | 0.190 | |
| regulation of phosphorus metabolic process | GO:0051174 | 210 | 0.181 | |
| small gtpase mediated signal transduction | GO:0007264 | 88 | 0.180 | |
| mitotic g2 dna damage checkpoint | GO:0007095 | 69 | 0.180 | |
| regulation of mitotic cell cycle | GO:0007346 | 190 | 0.168 | |
| regulation of phosphorylation | GO:0042325 | 147 | 0.168 | |
| regulation of small gtpase mediated signal transduction | GO:0051056 | 93 | 0.167 | |
| regulation of cell division | GO:0051302 | 72 | 0.156 | |
| negative regulation of mitotic cell cycle phase transition | GO:1901991 | 103 | 0.154 | |
| mitotic g2 m transition checkpoint | GO:0044818 | 70 | 0.151 | |
| spindle organization | GO:0007051 | 253 | 0.145 | |
| mrna cis splicing via spliceosome | GO:0045292 | 1 | 0.145 | |
| regulation of nuclear division | GO:0051783 | 58 | 0.143 | |
| regulation of phosphate metabolic process | GO:0019220 | 210 | 0.140 | |
| erk1 and erk2 cascade | GO:0070371 | 39 | 0.140 | |
| dna metabolic process | GO:0006259 | 227 | 0.140 | |
| ras protein signal transduction | GO:0007265 | 88 | 0.139 | |
| cell chemotaxis involved in malpighian tubule morphogenesis | GO:0061352 | 3 | 0.130 | |
| regulation of alternative mrna splicing via spliceosome | GO:0000381 | 60 | 0.128 | |
| cellular protein modification process | GO:0006464 | 438 | 0.126 | |
| regulation of cell proliferation | GO:0042127 | 163 | 0.125 | |
| negative regulation of cellular metabolic process | GO:0031324 | 382 | 0.121 | |
| regulation of protein modification process | GO:0031399 | 112 | 0.115 | |
| negative regulation of mitotic cell cycle | GO:0045930 | 109 | 0.113 | |
| positive regulation of response to stimulus | GO:0048584 | 323 | 0.113 | |
| chromosome organization | GO:0051276 | 360 | 0.108 | |
| signal transduction by phosphorylation | GO:0023014 | 107 | 0.106 | |
| regulation of intracellular signal transduction | GO:1902531 | 236 | 0.106 | |
| intracellular transport | GO:0046907 | 228 | 0.102 | |
| rna processing | GO:0006396 | 147 | 0.097 | |
| regulation of meiosis | GO:0040020 | 3 | 0.097 | |
| negative regulation of cellular biosynthetic process | GO:0031327 | 277 | 0.096 | |
| regulation of erk1 and erk2 cascade | GO:0070372 | 39 | 0.087 | |
| death | GO:0016265 | 284 | 0.083 | |
| establishment of localization in cell | GO:0051649 | 402 | 0.081 | |
| mapk cascade | GO:0000165 | 107 | 0.081 | |
| regulation of mrna splicing via spliceosome | GO:0048024 | 64 | 0.075 | |
| mitotic spindle organization | GO:0007052 | 220 | 0.072 | |
| positive regulation of phosphorus metabolic process | GO:0010562 | 139 | 0.071 | |
| mitotic spindle elongation | GO:0000022 | 81 | 0.069 | |
| single organism intracellular transport | GO:1902582 | 207 | 0.069 | |
| positive regulation of signaling | GO:0023056 | 243 | 0.066 | |
| positive regulation of cellular biosynthetic process | GO:0031328 | 316 | 0.063 | |
| mrna splicing via spliceosome | GO:0000398 | 73 | 0.062 | |
| negative regulation of purine nucleotide catabolic process | GO:0033122 | 1 | 0.062 | |
| rna splicing via transesterification reactions with bulged adenosine as nucleophile | GO:0000377 | 73 | 0.062 | |
| regulation of mrna metabolic process | GO:1903311 | 72 | 0.062 | |
| regulation of cellular protein metabolic process | GO:0032268 | 243 | 0.061 | |
| nucleosome assembly | GO:0006334 | 35 | 0.059 | |
| mrna processing | GO:0006397 | 104 | 0.058 | |
| regulation of rna splicing | GO:0043484 | 69 | 0.057 | |
| mitotic cell cycle phase transition | GO:0044772 | 138 | 0.057 | |
| negative regulation of cellular macromolecule biosynthetic process | GO:2000113 | 267 | 0.056 | |
| positive regulation of biosynthetic process | GO:0009891 | 316 | 0.056 | |
| positive regulation of macromolecule metabolic process | GO:0010604 | 405 | 0.056 | |
| meiotic cell cycle process | GO:1903046 | 132 | 0.054 | |
| regulation of mrna processing | GO:0050684 | 71 | 0.053 | |
| embryo development ending in birth or egg hatching | GO:0009792 | 152 | 0.053 | |
| mrna metabolic process | GO:0016071 | 124 | 0.049 | |
| negative regulation of small gtpase mediated signal transduction | GO:0051058 | 13 | 0.049 | |
| cellular response to dna damage stimulus | GO:0006974 | 223 | 0.049 | |
| oocyte differentiation | GO:0009994 | 145 | 0.049 | Fly |
| mitotic nuclear division | GO:0007067 | 213 | 0.048 | |
| regulation of mapk cascade | GO:0043408 | 92 | 0.046 | |
| regulation of chromosome organization | GO:0033044 | 64 | 0.046 | |
| ovarian follicle cell cell adhesion | GO:0007299 | 4 | 0.046 | |
| positive regulation of ras protein signal transduction | GO:0046579 | 43 | 0.045 | |
| dna templated transcription initiation | GO:0006352 | 25 | 0.044 | |
| positive regulation of cell communication | GO:0010647 | 250 | 0.044 | |
| body morphogenesis | GO:0010171 | 2 | 0.043 | |
| catabolic process | GO:0009056 | 409 | 0.043 | |
| organic substance catabolic process | GO:1901575 | 308 | 0.043 | |
| programmed cell death | GO:0012501 | 257 | 0.042 | |
| protein complex assembly | GO:0006461 | 200 | 0.042 | |
| protein destabilization | GO:0031648 | 2 | 0.042 | |
| covalent chromatin modification | GO:0016569 | 106 | 0.041 | |
| protein dna complex assembly | GO:0065004 | 63 | 0.041 | |
| regulation of cellular amino acid metabolic process | GO:0006521 | 0 | 0.040 | |
| regulation of rac gtpase activity | GO:0032314 | 1 | 0.039 | |
| intermediate filament based process | GO:0045103 | 1 | 0.038 | |
| nuclear transport | GO:0051169 | 72 | 0.038 | |
| reproductive system development | GO:0061458 | 74 | 0.037 | |
| regulation of protein metabolic process | GO:0051246 | 256 | 0.037 | |
| rna splicing | GO:0008380 | 83 | 0.037 | |
| positive regulation of macromolecule biosynthetic process | GO:0010557 | 283 | 0.036 | |
| cellular macromolecular complex assembly | GO:0034622 | 153 | 0.036 | |
| carbohydrate derivative metabolic process | GO:1901135 | 217 | 0.036 | |
| single organism catabolic process | GO:0044712 | 228 | 0.035 | |
| cellular catabolic process | GO:0044248 | 372 | 0.035 | |
| peptidyl amino acid modification | GO:0018193 | 105 | 0.034 | |
| cellular nitrogen compound catabolic process | GO:0044270 | 165 | 0.033 | |
| positive regulation of neuron projection regeneration | GO:0070572 | 3 | 0.033 | |
| regulation of cellular ketone metabolic process | GO:0010565 | 3 | 0.033 | |
| regulation of cellular catabolic process | GO:0031329 | 157 | 0.032 | |
| regulation of cell cycle process | GO:0010564 | 181 | 0.032 | |
| negative regulation of mitotic anaphase promoting complex activity | GO:0060564 | 2 | 0.031 | |
| positive regulation of erk1 and erk2 cascade | GO:0070374 | 36 | 0.031 | |
| formation of a compartment boundary | GO:0060288 | 4 | 0.031 | |
| positive regulation of signal transduction | GO:0009967 | 223 | 0.030 | |
| regulation of proteolysis involved in cellular protein catabolic process | GO:1903050 | 44 | 0.030 | |
| aromatic compound catabolic process | GO:0019439 | 166 | 0.030 | |
| negative regulation of transcription from rna polymerase ii promoter | GO:0000122 | 119 | 0.029 | |
| dna integrity checkpoint | GO:0031570 | 81 | 0.029 | |
| chromatin modification | GO:0016568 | 147 | 0.029 | |
| macromolecule catabolic process | GO:0009057 | 161 | 0.029 | |
| protein transport | GO:0015031 | 155 | 0.028 | |
| regionalization | GO:0003002 | 416 | 0.028 | |
| mitotic dna integrity checkpoint | GO:0044774 | 75 | 0.028 | |
| methylation | GO:0032259 | 47 | 0.028 | |
| cellular protein localization | GO:0034613 | 160 | 0.028 | |
| negative regulation of cellular component organization | GO:0051129 | 108 | 0.028 | |
| protein localization | GO:0008104 | 284 | 0.028 | |
| anterior posterior axis specification | GO:0009948 | 109 | 0.028 | |
| dorsal vessel heart proper cell fate commitment | GO:0035053 | 2 | 0.027 | |
| regulation of multicellular organismal development | GO:2000026 | 414 | 0.027 | |
| cell death | GO:0008219 | 279 | 0.027 | |
| negative regulation of transcription dna templated | GO:0045892 | 237 | 0.026 | |
| nitric oxide metabolic process | GO:0046209 | 1 | 0.025 | |
| alternative mrna splicing via spliceosome | GO:0000380 | 60 | 0.025 | |
| chromatin remodeling | GO:0006338 | 72 | 0.024 | |
| regulation of mitotic sister chromatid segregation | GO:0033047 | 28 | 0.024 | |
| sister chromatid segregation | GO:0000819 | 92 | 0.023 | |
| positive regulation of intracellular signal transduction | GO:1902533 | 116 | 0.023 | |
| regulation of dna metabolic process | GO:0051052 | 34 | 0.023 | |
| development of primary sexual characteristics | GO:0045137 | 50 | 0.023 | |
| microtubule cytoskeleton organization involved in mitosis | GO:1902850 | 52 | 0.023 | |
| regulation of cellular protein catabolic process | GO:1903362 | 44 | 0.023 | |
| negative regulation of biosynthetic process | GO:0009890 | 277 | 0.022 | |
| regulation of cell death | GO:0010941 | 173 | 0.022 | |
| negative regulation of cell death | GO:0060548 | 81 | 0.022 | |
| axis specification | GO:0009798 | 167 | 0.022 | |
| modification dependent macromolecule catabolic process | GO:0043632 | 79 | 0.022 | |
| cell cycle checkpoint | GO:0000075 | 95 | 0.022 | |
| negative regulation of cell cycle process | GO:0010948 | 109 | 0.021 | |
| regulation of programmed cell death | GO:0043067 | 152 | 0.021 | |
| regulation of cellular component biogenesis | GO:0044087 | 201 | 0.021 | |
| nitrogen compound transport | GO:0071705 | 85 | 0.021 | |
| anterior posterior axis specification follicular epithelium | GO:0030714 | 2 | 0.021 | |
| negative regulation of intrinsic apoptotic signaling pathway | GO:2001243 | 1 | 0.021 | |
| regulation of catabolic process | GO:0009894 | 170 | 0.020 | |
| chromosome segregation | GO:0007059 | 157 | 0.020 | |
| circulatory system development | GO:0072359 | 82 | 0.020 | |
| regulation of localization | GO:0032879 | 275 | 0.020 | |
| cytoplasmic transport | GO:0016482 | 130 | 0.019 | |
| negative regulation of developmental pigmentation | GO:0048086 | 1 | 0.019 | |
| histone modification | GO:0016570 | 106 | 0.019 | |
| positive regulation of cellular component organization | GO:0051130 | 156 | 0.019 | |
| posttranscriptional regulation of gene expression | GO:0010608 | 145 | 0.018 | |
| dendrite regeneration | GO:0031104 | 2 | 0.018 | |
| cellular macromolecule localization | GO:0070727 | 220 | 0.018 | |
| establishment of protein localization | GO:0045184 | 163 | 0.018 | |
| negative regulation of nucleoside metabolic process | GO:0045978 | 1 | 0.018 | |
| segmentation | GO:0035282 | 207 | 0.018 | |
| positive regulation of protein metabolic process | GO:0051247 | 128 | 0.017 | |
| meiotic dna double strand break formation | GO:0042138 | 1 | 0.017 | |
| positive regulation of cell proliferation | GO:0008284 | 47 | 0.017 | |
| nurse cell nucleus anchoring | GO:0007302 | 1 | 0.017 | |
| response to organic substance | GO:0010033 | 284 | 0.017 | |
| gonad development | GO:0008406 | 50 | 0.017 | |
| positive regulation of mapk cascade | GO:0043410 | 63 | 0.017 | |
| left right axis specification | GO:0070986 | 1 | 0.017 | |
| positive regulation of small gtpase mediated signal transduction | GO:0051057 | 43 | 0.017 | |
| negative regulation of eye photoreceptor cell development | GO:0042480 | 3 | 0.016 | |
| meiotic nuclear envelope disassembly | GO:0051078 | 2 | 0.016 | |
| ribonucleotide metabolic process | GO:0009259 | 145 | 0.016 | |
| mitotic dna damage checkpoint | GO:0044773 | 74 | 0.016 | |
| negative regulation of rna biosynthetic process | GO:1902679 | 240 | 0.016 | |
| phagocytosis | GO:0006909 | 215 | 0.016 | |
| border follicle cell delamination | GO:0030709 | 3 | 0.016 | |
| establishment or maintenance of polarity of larval imaginal disc epithelium | GO:0016336 | 3 | 0.016 | |
| regulation of cellular amine metabolic process | GO:0033238 | 3 | 0.016 | |
| dna conformation change | GO:0071103 | 105 | 0.016 | |
| positive regulation of golgi to plasma membrane protein transport | GO:0042998 | 2 | 0.016 | |
| regulation of proteasomal ubiquitin dependent protein catabolic process | GO:0032434 | 37 | 0.015 | |
| oxoacid metabolic process | GO:0043436 | 103 | 0.015 | |
| histone methylation | GO:0016571 | 40 | 0.015 | |
| regulation of cell cycle phase transition | GO:1901987 | 130 | 0.015 | |
| purine ribonucleotide metabolic process | GO:0009150 | 145 | 0.015 | |
| negative regulation of rna metabolic process | GO:0051253 | 251 | 0.015 | |
| small molecule metabolic process | GO:0044281 | 305 | 0.015 | |
| single organism biosynthetic process | GO:0044711 | 206 | 0.015 | |
| maintenance of protein location in nucleus | GO:0051457 | 2 | 0.014 | |
| negative regulation of macromolecule biosynthetic process | GO:0010558 | 270 | 0.014 | |
| ubiquitin dependent protein catabolic process | GO:0006511 | 78 | 0.014 | |
| purine nucleotide metabolic process | GO:0006163 | 146 | 0.014 | |
| genitalia development | GO:0048806 | 26 | 0.014 | |
| intracellular signal transduction | GO:0035556 | 300 | 0.014 | |
| cardiovascular system development | GO:0072358 | 82 | 0.014 | |
| negative regulation of phosphorylation | GO:0042326 | 35 | 0.014 | |
| cellular macromolecule catabolic process | GO:0044265 | 136 | 0.014 | |
| dna damage checkpoint | GO:0000077 | 78 | 0.014 | |
| imaginal disc derived appendage morphogenesis | GO:0035114 | 395 | 0.014 | |
| negative regulation of protein secretion | GO:0050709 | 2 | 0.014 | |
| negative regulation of cell cycle phase transition | GO:1901988 | 103 | 0.014 | |
| regulation of trichome morphogenesis | GO:2000039 | 3 | 0.014 | |
| male germline ring canal formation | GO:0030726 | 3 | 0.014 | |
| regulation of meiotic cell cycle | GO:0051445 | 9 | 0.013 | |
| regulation of translation | GO:0006417 | 56 | 0.013 | |
| regulation of striated muscle contraction | GO:0006942 | 2 | 0.013 | |
| negative regulation of protein metabolic process | GO:0051248 | 85 | 0.013 | |
| oocyte morphogenesis | GO:0048601 | 3 | 0.013 | |
| negative regulation of catabolic process | GO:0009895 | 36 | 0.013 | |
| ovulation cycle | GO:0042698 | 1 | 0.013 | |
| cell cycle phase transition | GO:0044770 | 140 | 0.013 | |
| nucleobase containing compound catabolic process | GO:0034655 | 165 | 0.013 | |
| regulation of planar cell polarity pathway involved in axis elongation | GO:2000040 | 2 | 0.012 | |
| positive regulation of transcription from rna polymerase i promoter | GO:0045943 | 3 | 0.012 | |
| embryonic pattern specification | GO:0009880 | 174 | 0.012 | |
| positive regulation of catabolic process | GO:0009896 | 105 | 0.012 | |
| protein complex biogenesis | GO:0070271 | 201 | 0.012 | |
| maternal determination of dorsal ventral axis ovarian follicular epithelium soma encoded | GO:0008071 | 1 | 0.012 | |
| negative regulation of nurse cell apoptotic process | GO:0045849 | 2 | 0.012 | |
| cellular response to nutrient | GO:0031670 | 1 | 0.012 | |
| response to oxidative stress | GO:0006979 | 86 | 0.012 | |
| modification dependent protein catabolic process | GO:0019941 | 78 | 0.012 | |
| protein dna complex subunit organization | GO:0071824 | 86 | 0.012 | |
| positive regulation of hemocyte differentiation | GO:0045612 | 1 | 0.012 | |
| macromolecule methylation | GO:0043414 | 45 | 0.012 | |
| organic cyclic compound catabolic process | GO:1901361 | 168 | 0.012 | |
| cell migration | GO:0016477 | 238 | 0.012 | |
| regulation of gene expression epigenetic | GO:0040029 | 128 | 0.011 | |
| regulation of immune system process | GO:0002682 | 176 | 0.011 | |
| positive regulation of nucleobase containing compound metabolic process | GO:0045935 | 332 | 0.011 | |
| cellular ketone metabolic process | GO:0042180 | 24 | 0.011 | |
| organic substance transport | GO:0071702 | 257 | 0.011 | |
| positive regulation of cellular protein metabolic process | GO:0032270 | 118 | 0.011 | |
| vesicle mediated transport | GO:0016192 | 381 | 0.011 | |
| negative regulation of gene expression | GO:0010629 | 387 | 0.011 | |
| organelle assembly | GO:0070925 | 198 | 0.011 | |
| positive regulation of chromatin silencing at telomere | GO:0031940 | 2 | 0.011 | |
| regulation of centriole replication | GO:0046599 | 2 | 0.011 | |
| protein methylation | GO:0006479 | 43 | 0.011 | |
| regulation of mitotic cell cycle phase transition | GO:1901990 | 130 | 0.011 | |
| regulation of mitosis | GO:0007088 | 56 | 0.010 | |
| protein alkylation | GO:0008213 | 43 | 0.010 | |
| proteolysis | GO:0006508 | 192 | 0.010 | |
| negative regulation of nucleic acid templated transcription | GO:1903507 | 240 | 0.010 | |
| intestinal epithelial cell development | GO:0060576 | 1 | 0.010 | |
| negative regulation of terminal cell fate specification open tracheal system | GO:0035155 | 2 | 0.010 | |
| spindle assembly involved in mitosis | GO:0090307 | 50 | 0.010 | |
| proteasome mediated ubiquitin dependent protein catabolic process | GO:0043161 | 54 | 0.010 | |
| dorsal closure leading edge cell differentiation | GO:0046663 | 2 | 0.010 | |
| chromatin assembly or disassembly | GO:0006333 | 52 | 0.010 | |
