| cellular protein modification process | GO:0006464 | 438 | 0.145 | |
| meiotic nuclear division | GO:0007126 | 151 | 0.138 | |
| transcription from rna polymerase ii promoter | GO:0006366 | 368 | 0.126 | |
| protein modification by small protein conjugation or removal | GO:0070647 | 106 | 0.098 | |
| protein modification process | GO:0036211 | 438 | 0.093 | |
| intracellular signal transduction | GO:0035556 | 300 | 0.087 | |
| regulation of cellular localization | GO:0060341 | 136 | 0.078 | |
| organic substance catabolic process | GO:1901575 | 308 | 0.070 | |
| positive regulation of gene expression | GO:0010628 | 290 | 0.060 | |
| regulation of cellular protein metabolic process | GO:0032268 | 243 | 0.059 | |
| meiotic cell cycle | GO:0051321 | 171 | 0.058 | |
| appendage development | GO:0048736 | 401 | 0.057 | |
| mrna catabolic process | GO:0006402 | 33 | 0.050 | |
| nuclear division | GO:0000280 | 332 | 0.050 | |
| heterocycle catabolic process | GO:0046700 | 166 | 0.050 | |
| organelle fission | GO:0048285 | 340 | 0.048 | |
| regulation of transcription from rna polymerase ii promoter | GO:0006357 | 378 | 0.048 | |
| catabolic process | GO:0009056 | 409 | 0.048 | |
| single organism intracellular transport | GO:1902582 | 207 | 0.047 | |
| positive regulation of cellular biosynthetic process | GO:0031328 | 316 | 0.047 | |
| protein modification by small protein conjugation | GO:0032446 | 79 | 0.046 | |
| nucleobase containing compound catabolic process | GO:0034655 | 165 | 0.045 | |
| positive regulation of macromolecule metabolic process | GO:0010604 | 405 | 0.044 | |
| positive regulation of rna biosynthetic process | GO:1902680 | 266 | 0.044 | |
| protein transport | GO:0015031 | 155 | 0.044 | |
| microtubule organizing center organization | GO:0031023 | 168 | 0.042 | |
| protein localization | GO:0008104 | 284 | 0.042 | |
| adult behavior | GO:0030534 | 137 | 0.042 | |
| positive regulation of nucleic acid templated transcription | GO:1903508 | 266 | 0.040 | |
| positive regulation of nitrogen compound metabolic process | GO:0051173 | 354 | 0.039 | |
| positive regulation of transcription from rna polymerase ii promoter | GO:0045944 | 204 | 0.037 | |
| organic cyclic compound catabolic process | GO:1901361 | 168 | 0.036 | |
| posttranscriptional regulation of gene expression | GO:0010608 | 145 | 0.033 | |
| regulation of localization | GO:0032879 | 275 | 0.033 | |
| establishment of protein localization | GO:0045184 | 163 | 0.033 | |
| positive regulation of nucleobase containing compound metabolic process | GO:0045935 | 332 | 0.031 | |
| regulation of transport | GO:0051049 | 181 | 0.030 | |
| rna catabolic process | GO:0006401 | 37 | 0.030 | |
| vesicle mediated transport | GO:0016192 | 381 | 0.030 | |
| positive regulation of biosynthetic process | GO:0009891 | 316 | 0.029 | |
| establishment of localization in cell | GO:0051649 | 402 | 0.029 | |
| cell cycle checkpoint | GO:0000075 | 95 | 0.027 | |
| regulation of protein metabolic process | GO:0051246 | 256 | 0.027 | |
| positive regulation of rna metabolic process | GO:0051254 | 271 | 0.026 | |
| axon guidance | GO:0007411 | 233 | 0.026 | |
| cellular macromolecule localization | GO:0070727 | 220 | 0.026 | |
| negative regulation of cellular protein metabolic process | GO:0032269 | 85 | 0.026 | |
| cellular response to dna damage stimulus | GO:0006974 | 223 | 0.025 | |
| centrosome organization | GO:0051297 | 163 | 0.025 | |
| regulation of phosphate metabolic process | GO:0019220 | 210 | 0.025 | |
| protein ubiquitination | GO:0016567 | 70 | 0.024 | |
| aromatic compound catabolic process | GO:0019439 | 166 | 0.024 | |
| organic substance transport | GO:0071702 | 257 | 0.024 | |
| regulation of mrna 3 end processing | GO:0031440 | 7 | 0.023 | |
| cellular macromolecule catabolic process | GO:0044265 | 136 | 0.023 | |
| mrna 3 end processing | GO:0031124 | 28 | 0.023 | |
| negative regulation of protein metabolic process | GO:0051248 | 85 | 0.023 | |
| centrosome duplication | GO:0051298 | 121 | 0.022 | |
| growth | GO:0040007 | 359 | 0.022 | |
| cellular protein localization | GO:0034613 | 160 | 0.022 | |
| intracellular protein transport | GO:0006886 | 104 | 0.022 | |
| translation | GO:0006412 | 69 | 0.021 | |
| ras protein signal transduction | GO:0007265 | 88 | 0.021 | |
| positive regulation of macromolecule biosynthetic process | GO:0010557 | 283 | 0.020 | |
| cell cycle phase transition | GO:0044770 | 140 | 0.020 | |
| regulation of meiosis | GO:0040020 | 3 | 0.020 | |
| death | GO:0016265 | 284 | 0.019 | |
| cellular catabolic process | GO:0044248 | 372 | 0.019 | |
| dna damage checkpoint | GO:0000077 | 78 | 0.019 | |
| macromolecule catabolic process | GO:0009057 | 161 | 0.019 | |
| negative regulation of multicellular organismal process | GO:0051241 | 142 | 0.018 | |
| regulation of cell cycle process | GO:0010564 | 181 | 0.018 | |
| negative regulation of cellular metabolic process | GO:0031324 | 382 | 0.017 | |
| response to abiotic stimulus | GO:0009628 | 341 | 0.017 | |
| nucleocytoplasmic transport | GO:0006913 | 72 | 0.017 | |
| chaperone mediated protein folding | GO:0061077 | 2 | 0.017 | |
| regulation of establishment of protein localization | GO:0070201 | 61 | 0.017 | |
| proteolysis | GO:0006508 | 192 | 0.016 | |
| modification dependent protein catabolic process | GO:0019941 | 78 | 0.016 | |
| regulation of hemocyte proliferation | GO:0035206 | 37 | 0.015 | |
| protein complex assembly | GO:0006461 | 200 | 0.015 | |
| eye development | GO:0001654 | 323 | 0.015 | |
| appendage morphogenesis | GO:0035107 | 397 | 0.015 | |
| small molecule metabolic process | GO:0044281 | 305 | 0.015 | |
| blastoderm segmentation | GO:0007350 | 159 | 0.015 | |
| mitotic g2 dna damage checkpoint | GO:0007095 | 69 | 0.015 | |
| regulation of multi organism process | GO:0043900 | 131 | 0.014 | |
| purine nucleoside metabolic process | GO:0042278 | 127 | 0.014 | |
| single organism nuclear import | GO:1902593 | 51 | 0.014 | |
| endocytosis | GO:0006897 | 310 | 0.014 | |
| centrosome cycle | GO:0007098 | 137 | 0.014 | |
| regulation of cell cycle | GO:0051726 | 291 | 0.014 | |
| positive regulation of cell death | GO:0010942 | 69 | 0.014 | |
| regulation of phosphorus metabolic process | GO:0051174 | 210 | 0.014 | |
| cell death | GO:0008219 | 279 | 0.014 | |
| spindle organization | GO:0007051 | 253 | 0.013 | |
| positive regulation of signaling | GO:0023056 | 243 | 0.013 | |
| dna integrity checkpoint | GO:0031570 | 81 | 0.013 | |
| regulation of mitotic cell cycle | GO:0007346 | 190 | 0.013 | |
| wound healing | GO:0042060 | 75 | 0.013 | |
| positive regulation of erk1 and erk2 cascade | GO:0070374 | 36 | 0.013 | |
| cellular nitrogen compound catabolic process | GO:0044270 | 165 | 0.012 | |
| response to biotic stimulus | GO:0009607 | 294 | 0.012 | |
| regulation of translation | GO:0006417 | 56 | 0.012 | |
| negative regulation of gene expression | GO:0010629 | 387 | 0.012 | |
| mitotic g2 m transition checkpoint | GO:0044818 | 70 | 0.012 | |
| protein targeting to nucleus | GO:0044744 | 51 | 0.012 | |
| body morphogenesis | GO:0010171 | 2 | 0.012 | |
| positive regulation of transport | GO:0051050 | 92 | 0.012 | |
| negative regulation of translation | GO:0017148 | 28 | 0.011 | |
| negative regulation of cell cycle process | GO:0010948 | 109 | 0.011 | |
| regulation of organelle organization | GO:0033043 | 196 | 0.011 | |
| regulation of programmed cell death | GO:0043067 | 152 | 0.011 | |
| nuclear transcribed mrna poly a tail shortening | GO:0000289 | 12 | 0.011 | |
| protein localization to nucleus | GO:0034504 | 55 | 0.011 | |
| positive regulation of immune system process | GO:0002684 | 68 | 0.011 | |
| rna 3 end processing | GO:0031123 | 45 | 0.011 | |
| taxis | GO:0042330 | 304 | 0.011 | |
| negative regulation of cell communication | GO:0010648 | 223 | 0.011 | |
| secretion by cell | GO:0032940 | 101 | 0.011 | |
| regulation of rac gtpase activity | GO:0032314 | 1 | 0.011 | |
| positive regulation of phosphorus metabolic process | GO:0010562 | 139 | 0.011 | |
| regulation of intracellular signal transduction | GO:1902531 | 236 | 0.011 | |
| regulation of protein transport | GO:0051223 | 57 | 0.011 | |
| mitotic cell cycle phase transition | GO:0044772 | 138 | 0.010 | |
| single organism behavior | GO:0044708 | 391 | 0.010 | |
| cellular protein catabolic process | GO:0044257 | 83 | 0.010 | |
| macromolecular complex assembly | GO:0065003 | 256 | 0.010 | |
| formation of a compartment boundary | GO:0060288 | 4 | 0.010 | |
| mrna metabolic process | GO:0016071 | 124 | 0.010 | |
| nuclear import | GO:0051170 | 51 | 0.010 | |
| protein import into nucleus | GO:0006606 | 51 | 0.010 | |