| negative regulation of gene expression | GO:0010629 | 387 | 0.441 | |
| negative regulation of rna metabolic process | GO:0051253 | 251 | 0.219 | |
| negative regulation of nucleobase containing compound metabolic process | GO:0045934 | 261 | 0.185 | |
| negative regulation of cellular metabolic process | GO:0031324 | 382 | 0.165 | |
| negative regulation of cellular macromolecule biosynthetic process | GO:2000113 | 267 | 0.159 | |
| regulation of gene expression epigenetic | GO:0040029 | 128 | 0.149 | |
| catabolic process | GO:0009056 | 409 | 0.141 | |
| vesicle mediated transport | GO:0016192 | 381 | 0.135 | |
| cellular protein modification process | GO:0006464 | 438 | 0.135 | |
| negative regulation of biosynthetic process | GO:0009890 | 277 | 0.133 | |
| cellular catabolic process | GO:0044248 | 372 | 0.119 | |
| establishment of localization in cell | GO:0051649 | 402 | 0.118 | |
| rna localization | GO:0006403 | 115 | 0.099 | |
| regulation of molecular function | GO:0065009 | 217 | 0.082 | |
| endocytosis | GO:0006897 | 310 | 0.076 | |
| enzyme linked receptor protein signaling pathway | GO:0007167 | 179 | 0.073 | |
| organelle fission | GO:0048285 | 340 | 0.072 | |
| spermatid development | GO:0007286 | 98 | 0.067 | |
| protein modification process | GO:0036211 | 438 | 0.067 | |
| phagocytosis | GO:0006909 | 215 | 0.055 | |
| immune system process | GO:0002376 | 347 | 0.053 | |
| transcription from rna polymerase ii promoter | GO:0006366 | 368 | 0.051 | |
| negative regulation of cellular biosynthetic process | GO:0031327 | 277 | 0.047 | |
| regulation of meiosis | GO:0040020 | 3 | 0.046 | |
| cell cell signaling involved in cell fate commitment | GO:0045168 | 210 | 0.045 | |
| macromolecule catabolic process | GO:0009057 | 161 | 0.042 | |
| negative regulation of macromolecule biosynthetic process | GO:0010558 | 270 | 0.041 | |
| lateral inhibition | GO:0046331 | 206 | 0.041 | |
| larval development | GO:0002164 | 104 | 0.039 | |
| organic substance catabolic process | GO:1901575 | 308 | 0.037 | |
| neuronal stem cell division | GO:0036445 | 35 | 0.036 | |
| cellular macromolecule catabolic process | GO:0044265 | 136 | 0.034 | |
| negative regulation of nucleic acid templated transcription | GO:1903507 | 240 | 0.034 | |
| organonitrogen compound metabolic process | GO:1901564 | 318 | 0.034 | |
| intracellular signal transduction | GO:0035556 | 300 | 0.034 | |
| negative regulation of response to stimulus | GO:0048585 | 258 | 0.032 | |
| regulation of phosphatase activity | GO:0010921 | 3 | 0.032 | |
| regulation of catalytic activity | GO:0050790 | 185 | 0.031 | |
| regulation of cell cycle process | GO:0010564 | 181 | 0.030 | |
| ovulation cycle | GO:0042698 | 1 | 0.030 | |
| organic cyclic compound catabolic process | GO:1901361 | 168 | 0.027 | |
| ribonucleoprotein complex disassembly | GO:0032988 | 1 | 0.025 | |
| heterocycle catabolic process | GO:0046700 | 166 | 0.025 | |
| phosphorylation | GO:0016310 | 294 | 0.025 | |
| small molecule metabolic process | GO:0044281 | 305 | 0.025 | |
| rna splicing via transesterification reactions with bulged adenosine as nucleophile | GO:0000377 | 73 | 0.024 | |
| negative regulation of transcription from rna polymerase ii promoter | GO:0000122 | 119 | 0.022 | |
| ras protein signal transduction | GO:0007265 | 88 | 0.022 | |
| regulation of protein metabolic process | GO:0051246 | 256 | 0.022 | |
| nucleoside phosphate metabolic process | GO:0006753 | 162 | 0.021 | |
| rna processing | GO:0006396 | 147 | 0.021 | |
| regulation of hemocyte proliferation | GO:0035206 | 37 | 0.021 | |
| regulation of multicellular organismal development | GO:2000026 | 414 | 0.020 | |
| small gtpase mediated signal transduction | GO:0007264 | 88 | 0.020 | |
| regulation of phosphorus metabolic process | GO:0051174 | 210 | 0.020 | |
| localization of cell | GO:0051674 | 257 | 0.019 | |
| organic substance transport | GO:0071702 | 257 | 0.019 | |
| nuclear transport | GO:0051169 | 72 | 0.019 | |
| negative regulation of rna biosynthetic process | GO:1902679 | 240 | 0.019 | |
| regulation of phosphate metabolic process | GO:0019220 | 210 | 0.018 | |
| growth | GO:0040007 | 359 | 0.018 | |
| response to biotic stimulus | GO:0009607 | 294 | 0.018 | |
| chromosome organization | GO:0051276 | 360 | 0.018 | |
| intracellular transport | GO:0046907 | 228 | 0.018 | |
| regulation of phosphorylation | GO:0042325 | 147 | 0.017 | |
| nitrogen compound transport | GO:0071705 | 85 | 0.017 | |
| carbohydrate derivative metabolic process | GO:1901135 | 217 | 0.017 | |
| protein localization | GO:0008104 | 284 | 0.017 | |
| mrna processing | GO:0006397 | 104 | 0.017 | |
| glycosyl compound metabolic process | GO:1901657 | 127 | 0.015 | |
| regionalization | GO:0003002 | 416 | 0.015 | |
| negative regulation of signal transduction | GO:0009968 | 206 | 0.015 | |
| cell cycle phase transition | GO:0044770 | 140 | 0.015 | |
| mrna splicing via spliceosome | GO:0000398 | 73 | 0.015 | |
| positive regulation of molecular function | GO:0044093 | 136 | 0.015 | |
| neuron projection guidance | GO:0097485 | 241 | 0.015 | |
| aromatic compound catabolic process | GO:0019439 | 166 | 0.015 | |
| negative regulation of cell communication | GO:0010648 | 223 | 0.014 | |
| body morphogenesis | GO:0010171 | 2 | 0.014 | |
| embryonic axis specification | GO:0000578 | 107 | 0.014 | |
| gene silencing | GO:0016458 | 138 | 0.014 | |
| purine nucleoside triphosphate catabolic process | GO:0009146 | 108 | 0.014 | |
| positive regulation of neuron projection regeneration | GO:0070572 | 3 | 0.014 | |
| purine containing compound metabolic process | GO:0072521 | 155 | 0.014 | |
| posttranscriptional gene silencing by rna | GO:0035194 | 45 | 0.014 | |
| immune system development | GO:0002520 | 57 | 0.013 | |
| cell proliferation | GO:0008283 | 299 | 0.013 | |
| ribonucleoside metabolic process | GO:0009119 | 127 | 0.013 | |
| positive regulation of hydrolase activity | GO:0051345 | 78 | 0.013 | |
| negative regulation of phosphatase activity | GO:0010923 | 3 | 0.013 | |
| regulation of cell differentiation | GO:0045595 | 302 | 0.013 | |
| regulation of catabolic process | GO:0009894 | 170 | 0.013 | |
| negative regulation of cell cycle process | GO:0010948 | 109 | 0.013 | |
| cellular nitrogen compound catabolic process | GO:0044270 | 165 | 0.013 | |
| regulation of small gtpase mediated signal transduction | GO:0051056 | 93 | 0.013 | |
| formation of a compartment boundary | GO:0060288 | 4 | 0.013 | |
| positive regulation of nucleobase containing compound metabolic process | GO:0045935 | 332 | 0.013 | |
| regulation of cellular protein metabolic process | GO:0032268 | 243 | 0.013 | |
| positive regulation of macromolecule metabolic process | GO:0010604 | 405 | 0.013 | |
| negative regulation of intracellular signal transduction | GO:1902532 | 57 | 0.013 | |
| regulation of alternative mrna splicing via spliceosome | GO:0000381 | 60 | 0.012 | |
| gland development | GO:0048732 | 191 | 0.012 | |
| cytoplasmic transport | GO:0016482 | 130 | 0.012 | |
| positive regulation of catalytic activity | GO:0043085 | 118 | 0.012 | |
| ribose phosphate metabolic process | GO:0019693 | 145 | 0.012 | |
| meiotic nuclear division | GO:0007126 | 151 | 0.012 | |
| negative regulation of mitotic cell cycle phase transition | GO:1901991 | 103 | 0.012 | |
| regulation of proteolysis involved in cellular protein catabolic process | GO:1903050 | 44 | 0.012 | |
| cuticle development | GO:0042335 | 86 | 0.012 | |
| single organism behavior | GO:0044708 | 391 | 0.012 | |
| regulation of mapk cascade | GO:0043408 | 92 | 0.012 | |
| negative regulation of nitrogen compound metabolic process | GO:0051172 | 265 | 0.012 | |
| hemopoiesis | GO:0030097 | 46 | 0.012 | |
| transmembrane receptor protein tyrosine kinase signaling pathway | GO:0007169 | 116 | 0.011 | |
| positive regulation of nucleic acid templated transcription | GO:1903508 | 266 | 0.011 | |
| nuclear division | GO:0000280 | 332 | 0.011 | |
| proteolysis | GO:0006508 | 192 | 0.011 | |
| death | GO:0016265 | 284 | 0.011 | |
| ameboidal type cell migration | GO:0001667 | 151 | 0.011 | |
| posttranscriptional regulation of gene expression | GO:0010608 | 145 | 0.011 | |
| regulation of cellular catabolic process | GO:0031329 | 157 | 0.011 | |
| signal transduction by phosphorylation | GO:0023014 | 107 | 0.011 | |
| rna splicing via transesterification reactions | GO:0000375 | 73 | 0.011 | |
| regulation of intracellular signal transduction | GO:1902531 | 236 | 0.010 | |
| organic acid metabolic process | GO:0006082 | 103 | 0.010 | |
