| small molecule metabolic process | GO:0044281 | 305 | 0.159 | |
| regulation of gene expression epigenetic | GO:0040029 | 128 | 0.158 | |
| organonitrogen compound metabolic process | GO:1901564 | 318 | 0.104 | |
| negative regulation of transcription dna templated | GO:0045892 | 237 | 0.095 | |
| negative regulation of cellular biosynthetic process | GO:0031327 | 277 | 0.095 | |
| chromosome organization | GO:0051276 | 360 | 0.092 | |
| macromolecular complex assembly | GO:0065003 | 256 | 0.086 | |
| transcription from rna polymerase ii promoter | GO:0006366 | 368 | 0.085 | |
| negative regulation of cellular metabolic process | GO:0031324 | 382 | 0.082 | |
| regulation of cellular component biogenesis | GO:0044087 | 201 | 0.080 | |
| negative regulation of biosynthetic process | GO:0009890 | 277 | 0.068 | |
| positive regulation of nucleobase containing compound metabolic process | GO:0045935 | 332 | 0.068 | |
| chromatin silencing | GO:0006342 | 76 | 0.067 | |
| positive regulation of nucleic acid templated transcription | GO:1903508 | 266 | 0.062 | |
| positive regulation of rna metabolic process | GO:0051254 | 271 | 0.049 | |
| carbohydrate derivative metabolic process | GO:1901135 | 217 | 0.047 | |
| negative regulation of nitrogen compound metabolic process | GO:0051172 | 265 | 0.046 | |
| single organism biosynthetic process | GO:0044711 | 206 | 0.046 | |
| regulation of ras protein signal transduction | GO:0046578 | 93 | 0.045 | |
| cellular macromolecular complex assembly | GO:0034622 | 153 | 0.044 | |
| negative regulation of rna biosynthetic process | GO:1902679 | 240 | 0.042 | |
| regulation of phosphorus metabolic process | GO:0051174 | 210 | 0.042 | |
| dna conformation change | GO:0071103 | 105 | 0.040 | |
| negative regulation of gene expression epigenetic | GO:0045814 | 77 | 0.040 | |
| regulation of phosphate metabolic process | GO:0019220 | 210 | 0.039 | |
| regulation of transcription from rna polymerase ii promoter | GO:0006357 | 378 | 0.039 | |
| rna processing | GO:0006396 | 147 | 0.039 | |
| nucleoside phosphate metabolic process | GO:0006753 | 162 | 0.036 | |
| ras protein signal transduction | GO:0007265 | 88 | 0.033 | |
| negative regulation of nucleobase containing compound metabolic process | GO:0045934 | 261 | 0.032 | |
| homeostatic process | GO:0042592 | 199 | 0.032 | |
| endocytosis | GO:0006897 | 310 | 0.029 | |
| organophosphate metabolic process | GO:0019637 | 195 | 0.029 | |
| organonitrogen compound biosynthetic process | GO:1901566 | 117 | 0.029 | |
| phagocytosis | GO:0006909 | 215 | 0.029 | |
| protein complex assembly | GO:0006461 | 200 | 0.029 | |
| protein dna complex subunit organization | GO:0071824 | 86 | 0.028 | |
| positive regulation of biosynthetic process | GO:0009891 | 316 | 0.028 | |
| negative regulation of macromolecule biosynthetic process | GO:0010558 | 270 | 0.027 | |
| positive regulation of cellular component biogenesis | GO:0044089 | 80 | 0.027 | |
| positive regulation of phosphate metabolic process | GO:0045937 | 139 | 0.027 | |
| organic acid metabolic process | GO:0006082 | 103 | 0.026 | |
| regulation of cellular amino acid metabolic process | GO:0006521 | 0 | 0.025 | |
| cellular amine metabolic process | GO:0044106 | 12 | 0.025 | |
| positive regulation of phosphorus metabolic process | GO:0010562 | 139 | 0.025 | |
| regionalization | GO:0003002 | 416 | 0.024 | |
| small gtpase mediated signal transduction | GO:0007264 | 88 | 0.024 | |
| positive regulation of nitrogen compound metabolic process | GO:0051173 | 354 | 0.023 | |
| phosphorylation | GO:0016310 | 294 | 0.023 | |
| neurological system process | GO:0050877 | 358 | 0.023 | |
| dna metabolic process | GO:0006259 | 227 | 0.022 | |
| positive regulation of transcription dna templated | GO:0045893 | 266 | 0.022 | |
| cell proliferation | GO:0008283 | 299 | 0.022 | |
| nucleotide metabolic process | GO:0009117 | 161 | 0.022 | |
| actin cytoskeleton organization | GO:0030036 | 206 | 0.021 | Worm |
| response to biotic stimulus | GO:0009607 | 294 | 0.020 | |
| regulation of cellular ketone metabolic process | GO:0010565 | 3 | 0.020 | |
| organelle assembly | GO:0070925 | 198 | 0.020 | |
| peptidyl lysine modification | GO:0018205 | 57 | 0.019 | |
| response to external biotic stimulus | GO:0043207 | 293 | 0.019 | |
| body morphogenesis | GO:0010171 | 2 | 0.019 | |
| purine containing compound metabolic process | GO:0072521 | 155 | 0.018 | |
| aromatic compound catabolic process | GO:0019439 | 166 | 0.018 | |
| regulation of cellular protein metabolic process | GO:0032268 | 243 | 0.017 | |
| positive regulation of cellular biosynthetic process | GO:0031328 | 316 | 0.017 | |
| peptidyl lysine acetylation | GO:0018394 | 39 | 0.017 | |
| carboxylic acid metabolic process | GO:0019752 | 92 | 0.017 | |
| regulation of organelle organization | GO:0033043 | 196 | 0.017 | |
| organophosphate biosynthetic process | GO:0090407 | 46 | 0.017 | |
| rna localization | GO:0006403 | 115 | 0.017 | |
| response to abiotic stimulus | GO:0009628 | 341 | 0.016 | |
| single organism behavior | GO:0044708 | 391 | 0.016 | |
| actin filament based process | GO:0030029 | 220 | 0.016 | Worm |
| negative regulation of nucleic acid templated transcription | GO:1903507 | 240 | 0.016 | |
| histone acetylation | GO:0016573 | 38 | 0.016 | |
| mitotic g2 dna damage checkpoint | GO:0007095 | 69 | 0.015 | |
| regulation of meiosis | GO:0040020 | 3 | 0.015 | |
| regulation of small gtpase mediated signal transduction | GO:0051056 | 93 | 0.015 | |
| positive regulation of response to stimulus | GO:0048584 | 323 | 0.014 | |
| positive regulation of transcription from rna polymerase ii promoter | GO:0045944 | 204 | 0.014 | |
| chromatin organization | GO:0006325 | 207 | 0.014 | |
| negative regulation of rna metabolic process | GO:0051253 | 251 | 0.014 | |
| negative regulation of response to stimulus | GO:0048585 | 258 | 0.014 | |
| nucleobase containing small molecule metabolic process | GO:0055086 | 174 | 0.014 | |
| peptidyl serine phosphorylation | GO:0018105 | 7 | 0.013 | |
| positive regulation of rna biosynthetic process | GO:1902680 | 266 | 0.013 | |
| chromatin silencing at centromere | GO:0030702 | 3 | 0.013 | |
| regulation of protein complex assembly | GO:0043254 | 42 | 0.013 | |
| negative regulation of cellular macromolecule biosynthetic process | GO:2000113 | 267 | 0.013 | |
| negative regulation of gene expression | GO:0010629 | 387 | 0.013 | |
| chromatin modification | GO:0016568 | 147 | 0.013 | |
| mrna cis splicing via spliceosome | GO:0045292 | 1 | 0.013 | |
| ribose phosphate metabolic process | GO:0019693 | 145 | 0.013 | |
| negative regulation of cell communication | GO:0010648 | 223 | 0.012 | |
| signal transduction by phosphorylation | GO:0023014 | 107 | 0.012 | |
| dna replication | GO:0006260 | 48 | 0.012 | |
| cation homeostasis | GO:0055080 | 51 | 0.012 | |
| covalent chromatin modification | GO:0016569 | 106 | 0.012 | |
| amine metabolic process | GO:0009308 | 12 | 0.012 | |
| response to temperature stimulus | GO:0009266 | 106 | 0.012 | |
| gene silencing | GO:0016458 | 138 | 0.012 | |
| cellular ketone metabolic process | GO:0042180 | 24 | 0.012 | |
| lipid metabolic process | GO:0006629 | 121 | 0.011 | |
| transmembrane receptor protein tyrosine kinase signaling pathway | GO:0007169 | 116 | 0.011 | |
| meiotic cell cycle | GO:0051321 | 171 | 0.011 | |
| oxoacid metabolic process | GO:0043436 | 103 | 0.011 | |
| chromatin remodeling | GO:0006338 | 72 | 0.011 | |
| positive regulation of macromolecule metabolic process | GO:0010604 | 405 | 0.011 | |
| spindle organization | GO:0007051 | 253 | 0.010 | |
| response to organic substance | GO:0010033 | 284 | 0.010 | |
| left right axis specification | GO:0070986 | 1 | 0.010 | |
| purine ribonucleoside triphosphate metabolic process | GO:0009205 | 119 | 0.010 | |
