| rna splicing | GO:0008380 | 83 | 0.308 | |
| rna processing | GO:0006396 | 147 | 0.260 | Yeast |
| macromolecular complex assembly | GO:0065003 | 256 | 0.211 | |
| rna splicing via transesterification reactions | GO:0000375 | 73 | 0.209 | |
| proteolysis | GO:0006508 | 192 | 0.202 | |
| mrna splicing via spliceosome | GO:0000398 | 73 | 0.147 | |
| centrosome organization | GO:0051297 | 163 | 0.145 | |
| regulation of mrna metabolic process | GO:1903311 | 72 | 0.135 | |
| positive regulation of macromolecule metabolic process | GO:0010604 | 405 | 0.127 | |
| mrna processing | GO:0006397 | 104 | 0.124 | Yeast |
| regulation of mrna processing | GO:0050684 | 71 | 0.109 | |
| protein modification by small protein conjugation or removal | GO:0070647 | 106 | 0.102 | |
| mrna metabolic process | GO:0016071 | 124 | 0.093 | Yeast |
| establishment of localization in cell | GO:0051649 | 402 | 0.091 | |
| negative regulation of nucleic acid templated transcription | GO:1903507 | 240 | 0.091 | |
| rna splicing via transesterification reactions with bulged adenosine as nucleophile | GO:0000377 | 73 | 0.088 | |
| ribonucleoprotein complex subunit organization | GO:0071826 | 28 | 0.085 | |
| body morphogenesis | GO:0010171 | 2 | 0.084 | |
| cellular macromolecule catabolic process | GO:0044265 | 136 | 0.080 | |
| regulation of mrna splicing via spliceosome | GO:0048024 | 64 | 0.078 | |
| negative regulation of gene expression | GO:0010629 | 387 | 0.077 | |
| regulation of multicellular organismal development | GO:2000026 | 414 | 0.077 | |
| regulation of rna splicing | GO:0043484 | 69 | 0.070 | |
| regulation of cell differentiation | GO:0045595 | 302 | 0.070 | |
| regulation of alternative mrna splicing via spliceosome | GO:0000381 | 60 | 0.069 | |
| centrosome cycle | GO:0007098 | 137 | 0.069 | |
| negative regulation of nitrogen compound metabolic process | GO:0051172 | 265 | 0.069 | |
| nuclear division | GO:0000280 | 332 | 0.066 | |
| regulation of localization | GO:0032879 | 275 | 0.066 | |
| gene silencing | GO:0016458 | 138 | 0.065 | |
| positive regulation of proteolysis | GO:0045862 | 52 | 0.065 | |
| regulation of organelle organization | GO:0033043 | 196 | 0.065 | |
| regulation of anatomical structure size | GO:0090066 | 163 | 0.063 | |
| negative regulation of nucleobase containing compound metabolic process | GO:0045934 | 261 | 0.062 | |
| mitotic nuclear division | GO:0007067 | 213 | 0.062 | |
| multicellular organismal aging | GO:0010259 | 140 | 0.057 | |
| cellular protein modification process | GO:0006464 | 438 | 0.056 | |
| catabolic process | GO:0009056 | 409 | 0.056 | |
| determination of adult lifespan | GO:0008340 | 137 | 0.056 | |
| microtubule organizing center organization | GO:0031023 | 168 | 0.055 | |
| ribonucleoprotein complex biogenesis | GO:0022613 | 31 | 0.055 | |
| single organism intracellular transport | GO:1902582 | 207 | 0.052 | |
| negative regulation of rna metabolic process | GO:0051253 | 251 | 0.051 | |
| regulation of meiosis | GO:0040020 | 3 | 0.051 | |
| modification dependent macromolecule catabolic process | GO:0043632 | 79 | 0.051 | |
| embryo development ending in birth or egg hatching | GO:0009792 | 152 | 0.050 | |
| cellular macromolecular complex assembly | GO:0034622 | 153 | 0.049 | |
| aging | GO:0007568 | 143 | 0.047 | |
| localization of cell | GO:0051674 | 257 | 0.047 | |
| larval development | GO:0002164 | 104 | 0.044 | |
| response to other organism | GO:0051707 | 293 | 0.043 | |
| negative regulation of rna biosynthetic process | GO:1902679 | 240 | 0.042 | |
| negative regulation of cell communication | GO:0010648 | 223 | 0.042 | |
| cell division | GO:0051301 | 248 | 0.042 | |
| cellular protein localization | GO:0034613 | 160 | 0.042 | |
| protein catabolic process | GO:0030163 | 101 | 0.041 | |
| cellular macromolecule localization | GO:0070727 | 220 | 0.041 | |
| organelle localization | GO:0051640 | 148 | 0.041 | |
| growth | GO:0040007 | 359 | 0.039 | |
| spindle organization | GO:0007051 | 253 | 0.039 | |
| organelle assembly | GO:0070925 | 198 | 0.039 | |
| regionalization | GO:0003002 | 416 | 0.038 | |
| intracellular transport | GO:0046907 | 228 | 0.037 | |
| posttranscriptional regulation of gene expression | GO:0010608 | 145 | 0.037 | |
| ncrna metabolic process | GO:0034660 | 43 | 0.037 | |
| positive regulation of transcription dna templated | GO:0045893 | 266 | 0.036 | |
| cell motility | GO:0048870 | 251 | 0.036 | |
| small molecule metabolic process | GO:0044281 | 305 | 0.035 | |
| regulation of protein catabolic process | GO:0042176 | 55 | 0.035 | |
| negative regulation of cellular metabolic process | GO:0031324 | 382 | 0.034 | |
| proteolysis involved in cellular protein catabolic process | GO:0051603 | 83 | 0.034 | |
| regulation of cell size | GO:0008361 | 63 | 0.034 | |
| ubiquitin dependent protein catabolic process | GO:0006511 | 78 | 0.033 | |
| protein transport | GO:0015031 | 155 | 0.032 | |
| negative regulation of multicellular organismal process | GO:0051241 | 142 | 0.031 | |
| establishment of protein localization | GO:0045184 | 163 | 0.031 | |
| oxoacid metabolic process | GO:0043436 | 103 | 0.031 | |
| alternative mrna splicing via spliceosome | GO:0000380 | 60 | 0.031 | |
| negative regulation of cellular macromolecule biosynthetic process | GO:2000113 | 267 | 0.030 | |
| response to external biotic stimulus | GO:0043207 | 293 | 0.030 | |
| regulation of cellular component biogenesis | GO:0044087 | 201 | 0.030 | |
| organelle fission | GO:0048285 | 340 | 0.030 | |
| protein modification by small protein conjugation | GO:0032446 | 79 | 0.029 | |
| macromolecule catabolic process | GO:0009057 | 161 | 0.028 | |
| cellular catabolic process | GO:0044248 | 372 | 0.028 | |
| organonitrogen compound metabolic process | GO:1901564 | 318 | 0.028 | |
| synapse organization | GO:0050808 | 196 | 0.028 | |
| regulation of cellular component size | GO:0032535 | 98 | 0.028 | |
| epithelial cell differentiation | GO:0030855 | 322 | 0.028 | |
| cellular protein catabolic process | GO:0044257 | 83 | 0.028 | |
| regulation of nuclear division | GO:0051783 | 58 | 0.027 | |
| tube morphogenesis | GO:0035239 | 191 | 0.027 | |
| cellular homeostasis | GO:0019725 | 80 | 0.027 | |
| mitotic spindle organization | GO:0007052 | 220 | 0.026 | |
| positive regulation of biosynthetic process | GO:0009891 | 316 | 0.026 | |
| negative regulation of developmental process | GO:0051093 | 201 | 0.026 | |
| cellular nitrogen compound catabolic process | GO:0044270 | 165 | 0.026 | |
| lateral inhibition | GO:0046331 | 206 | 0.026 | |
| protein modification process | GO:0036211 | 438 | 0.026 | |
| regulation of gene expression epigenetic | GO:0040029 | 128 | 0.026 | |
| negative regulation of transcription dna templated | GO:0045892 | 237 | 0.026 | |
| nucleocytoplasmic transport | GO:0006913 | 72 | 0.025 | |
| establishment of organelle localization | GO:0051656 | 122 | 0.025 | |
| positive regulation of protein catabolic process | GO:0045732 | 34 | 0.025 | |
| mesenchymal cell differentiation | GO:0048762 | 1 | 0.025 | |
| positive regulation of nucleobase containing compound metabolic process | GO:0045935 | 332 | 0.024 | |
| imaginal disc derived wing morphogenesis | GO:0007476 | 337 | 0.024 | |
| regulation of protein metabolic process | GO:0051246 | 256 | 0.024 | |
| cell proliferation | GO:0008283 | 299 | 0.024 | |
| programmed cell death | GO:0012501 | 257 | 0.024 | |
| defense response | GO:0006952 | 300 | 0.023 | |
| dna metabolic process | GO:0006259 | 227 | 0.023 | |
| intracellular protein transport | GO:0006886 | 104 | 0.023 | |
| positive regulation of rna biosynthetic process | GO:1902680 | 266 | 0.023 | |
| reproductive structure development | GO:0048608 | 74 | 0.023 | |
| positive regulation of cellular component organization | GO:0051130 | 156 | 0.023 | |
| negative regulation of biosynthetic process | GO:0009890 | 277 | 0.022 | |
| rna localization | GO:0006403 | 115 | 0.022 | |
| cell death | GO:0008219 | 279 | 0.022 | |
| gland development | GO:0048732 | 191 | 0.022 | |
| muscle structure development | GO:0061061 | 224 | 0.022 | |
| regulation of cell division | GO:0051302 | 72 | 0.022 | |
| regulation of cellular amine metabolic process | GO:0033238 | 3 | 0.022 | |
| cell migration | GO:0016477 | 238 | 0.021 | |
| regulation of proteolysis | GO:0030162 | 87 | 0.021 | |
| camera type eye development | GO:0043010 | 4 | 0.021 | |
| columnar cuboidal epithelial cell differentiation | GO:0002065 | 256 | 0.021 | |
| ribonucleoprotein complex assembly | GO:0022618 | 23 | 0.021 | |
| response to radiation | GO:0009314 | 155 | 0.021 | |
| organic substance catabolic process | GO:1901575 | 308 | 0.021 | |
| regulation of transcription from rna polymerase ii promoter | GO:0006357 | 378 | 0.020 | |
| embryonic morphogenesis | GO:0048598 | 206 | 0.020 | |
| vesicle mediated transport | GO:0016192 | 381 | 0.020 | |
| positive regulation of gene expression | GO:0010628 | 290 | 0.020 | |
| organic substance transport | GO:0071702 | 257 | 0.020 | |
| posttranscriptional gene silencing by rna | GO:0035194 | 45 | 0.020 | |
| modification dependent protein catabolic process | GO:0019941 | 78 | 0.020 | |
| developmental growth | GO:0048589 | 280 | 0.019 | |
| dorsal ventral pattern formation | GO:0009953 | 133 | 0.019 | |
| axis specification | GO:0009798 | 167 | 0.019 | |
| wing disc pattern formation | GO:0035222 | 66 | 0.019 | |
| positive regulation of cellular protein metabolic process | GO:0032270 | 118 | 0.019 | |
| enzyme linked receptor protein signaling pathway | GO:0007167 | 179 | 0.019 | |
| apoptotic process | GO:0006915 | 159 | 0.018 | |
| nuclear transport | GO:0051169 | 72 | 0.018 | |
| regulation of apoptotic process | GO:0042981 | 130 | 0.018 | |
| cellular ketone metabolic process | GO:0042180 | 24 | 0.018 | |
| immune effector process | GO:0002252 | 98 | 0.017 | |
| ovarian follicle cell development | GO:0030707 | 248 | 0.017 | |
| taxis | GO:0042330 | 304 | 0.017 | |
| positive regulation of nucleic acid templated transcription | GO:1903508 | 266 | 0.017 | |
| response to abiotic stimulus | GO:0009628 | 341 | 0.017 | |
| chromatin organization | GO:0006325 | 207 | 0.017 | |
| regulation of immune system process | GO:0002682 | 176 | 0.017 | |
| regulation of developmental growth | GO:0048638 | 174 | 0.017 | |
| reproductive system development | GO:0061458 | 74 | 0.016 | |
| response to biotic stimulus | GO:0009607 | 294 | 0.016 | |
| stem cell differentiation | GO:0048863 | 117 | 0.016 | |
| sex differentiation | GO:0007548 | 81 | 0.016 | |
| gene silencing by rna | GO:0031047 | 57 | 0.016 | |
| positive regulation of cellular biosynthetic process | GO:0031328 | 316 | 0.016 | |
| response to bacterium | GO:0009617 | 198 | 0.016 | |
| protein complex assembly | GO:0006461 | 200 | 0.016 | |
| cytoplasmic transport | GO:0016482 | 130 | 0.016 | |
| death | GO:0016265 | 284 | 0.015 | |
| protein localization | GO:0008104 | 284 | 0.015 | |
| proteasomal protein catabolic process | GO:0010498 | 59 | 0.015 | |
| molting cycle | GO:0042303 | 56 | 0.015 | |
| regulation of cell cycle process | GO:0010564 | 181 | 0.015 | |
| protein import into nucleus | GO:0006606 | 51 | 0.015 | |
| regulation of response to external stimulus | GO:0032101 | 115 | 0.015 | |
| mitotic spindle elongation | GO:0000022 | 81 | 0.015 | |
| transmembrane receptor protein serine threonine kinase signaling pathway | GO:0007178 | 65 | 0.015 | |
| tube development | GO:0035295 | 244 | 0.015 | |
| cell growth | GO:0016049 | 108 | 0.015 | |
| wound healing | GO:0042060 | 75 | 0.015 | |
| regulation of programmed cell death | GO:0043067 | 152 | 0.014 | |
| establishment or maintenance of cell polarity | GO:0007163 | 167 | 0.014 | |
| carboxylic acid metabolic process | GO:0019752 | 92 | 0.014 | |
| homeostatic process | GO:0042592 | 199 | 0.014 | |
| wing disc morphogenesis | GO:0007472 | 344 | 0.014 | |
| appendage development | GO:0048736 | 401 | 0.014 | |
| nucleotide metabolic process | GO:0009117 | 161 | 0.014 | |
| tissue morphogenesis | GO:0048729 | 297 | 0.014 | |
| reproductive behavior | GO:0019098 | 122 | 0.014 | |
| embryonic development via the syncytial blastoderm | GO:0001700 | 148 | 0.014 | |
| antimicrobial humoral response | GO:0019730 | 99 | 0.014 | |
| negative regulation of cellular biosynthetic process | GO:0031327 | 277 | 0.013 | |
| proteasome mediated ubiquitin dependent protein catabolic process | GO:0043161 | 54 | 0.013 | |
| regulation of chromatin modification | GO:1903308 | 28 | 0.013 | |
| regulation of cellular localization | GO:0060341 | 136 | 0.013 | |
| connective tissue development | GO:0061448 | 3 | 0.013 | |
| aromatic compound catabolic process | GO:0019439 | 166 | 0.013 | |
| cellular cation homeostasis | GO:0030003 | 38 | 0.013 | |
| cellular amide metabolic process | GO:0043603 | 80 | 0.013 | |
| heterocycle catabolic process | GO:0046700 | 166 | 0.013 | |
| transcription from rna polymerase ii promoter | GO:0006366 | 368 | 0.013 | |
| compound eye morphogenesis | GO:0001745 | 249 | 0.013 | |
| amine metabolic process | GO:0009308 | 12 | 0.013 | |
| embryonic axis specification | GO:0000578 | 107 | 0.013 | |
| single organism biosynthetic process | GO:0044711 | 206 | 0.012 | |
| negative regulation of transcription from rna polymerase ii promoter | GO:0000122 | 119 | 0.012 | |
| endomembrane system organization | GO:0010256 | 119 | 0.012 | |
| protein ubiquitination | GO:0016567 | 70 | 0.012 | |
| carbohydrate derivative metabolic process | GO:1901135 | 217 | 0.012 | |
| morphogenesis of an epithelium | GO:0002009 | 276 | 0.012 | |
| organonitrogen compound biosynthetic process | GO:1901566 | 117 | 0.012 | |
| stem cell development | GO:0048864 | 79 | 0.012 | |
| nucleoside phosphate metabolic process | GO:0006753 | 162 | 0.012 | |
| negative regulation of cell differentiation | GO:0045596 | 143 | 0.012 | |
| rrna processing | GO:0006364 | 3 | 0.012 | |
| positive regulation of signal transduction | GO:0009967 | 223 | 0.012 | |
| nuclear export | GO:0051168 | 24 | 0.012 | |
| cellular response to extracellular stimulus | GO:0031668 | 64 | 0.012 | |
| immune system process | GO:0002376 | 347 | 0.012 | |
| centrosome duplication | GO:0051298 | 121 | 0.012 | |
| development of primary sexual characteristics | GO:0045137 | 50 | 0.012 | |
| single organism cellular localization | GO:1902580 | 180 | 0.012 | |
| anterior posterior axis specification | GO:0009948 | 109 | 0.012 | |
| protein complex biogenesis | GO:0070271 | 201 | 0.012 | |
| protein localization to organelle | GO:0033365 | 82 | 0.011 | |
| ribonucleotide catabolic process | GO:0009261 | 109 | 0.011 | |
| positive regulation of response to stimulus | GO:0048584 | 323 | 0.011 | |
| regulation of cellular ketone metabolic process | GO:0010565 | 3 | 0.011 | |
| nucleobase containing compound catabolic process | GO:0034655 | 165 | 0.011 | |
| eye development | GO:0001654 | 323 | 0.011 | |
| epithelial cell development | GO:0002064 | 274 | 0.011 | |
| segmentation | GO:0035282 | 207 | 0.011 | |
| axon development | GO:0061564 | 297 | 0.011 | |
| response to light stimulus | GO:0009416 | 124 | 0.011 | |
| regulation of cytoskeleton organization | GO:0051493 | 89 | 0.011 | |
| lipid localization | GO:0010876 | 54 | 0.011 | |
| spermatid development | GO:0007286 | 98 | 0.011 | |
| regulation of anatomical structure morphogenesis | GO:0022603 | 242 | 0.011 | |
| digestive tract development | GO:0048565 | 149 | 0.011 | |
| negative regulation of macromolecule biosynthetic process | GO:0010558 | 270 | 0.011 | |
| response to nitrogen compound | GO:1901698 | 90 | 0.011 | |
| ncrna processing | GO:0034470 | 30 | 0.011 | |
| regulation of cellular protein metabolic process | GO:0032268 | 243 | 0.011 | |
| protein targeting | GO:0006605 | 64 | 0.010 | |
| post embryonic appendage morphogenesis | GO:0035120 | 385 | 0.010 | |
| eggshell formation | GO:0030703 | 105 | 0.010 | |
| nucleobase containing compound transport | GO:0015931 | 56 | 0.010 | |
| regulation of transport | GO:0051049 | 181 | 0.010 | |
| regulation of protein modification process | GO:0031399 | 112 | 0.010 | |
| cellular amine metabolic process | GO:0044106 | 12 | 0.010 | |
| cellular response to dna damage stimulus | GO:0006974 | 223 | 0.010 | |
