| rna splicing | GO:0008380 | 83 | 0.343 | |
| rna processing | GO:0006396 | 147 | 0.336 | |
| mrna splicing via spliceosome | GO:0000398 | 73 | 0.274 | |
| rna splicing via transesterification reactions | GO:0000375 | 73 | 0.240 | |
| negative regulation of cellular metabolic process | GO:0031324 | 382 | 0.217 | |
| chromatin assembly | GO:0031497 | 48 | 0.195 | |
| mrna processing | GO:0006397 | 104 | 0.164 | |
| spindle organization | GO:0007051 | 253 | 0.161 | |
| negative regulation of cellular biosynthetic process | GO:0031327 | 277 | 0.151 | |
| mrna metabolic process | GO:0016071 | 124 | 0.147 | |
| protein modification process | GO:0036211 | 438 | 0.142 | |
| negative regulation of nitrogen compound metabolic process | GO:0051172 | 265 | 0.142 | |
| programmed cell death | GO:0012501 | 257 | 0.125 | |
| rna splicing via transesterification reactions with bulged adenosine as nucleophile | GO:0000377 | 73 | 0.121 | |
| cell death | GO:0008219 | 279 | 0.117 | |
| dna conformation change | GO:0071103 | 105 | 0.114 | |
| meiotic nuclear division | GO:0007126 | 151 | 0.113 | |
| gene silencing | GO:0016458 | 138 | 0.113 | |
| regulation of organelle organization | GO:0033043 | 196 | 0.107 | |
| cellular protein modification process | GO:0006464 | 438 | 0.100 | |
| regulation of cellular amino acid metabolic process | GO:0006521 | 0 | 0.100 | |
| embryo development ending in birth or egg hatching | GO:0009792 | 152 | 0.099 | |
| death | GO:0016265 | 284 | 0.099 | |
| positive regulation of cellular amino acid metabolic process | GO:0045764 | 0 | 0.098 | |
| locomotory behavior | GO:0007626 | 176 | 0.096 | |
| regulation of mrna splicing via spliceosome | GO:0048024 | 64 | 0.093 | |
| chromatin silencing | GO:0006342 | 76 | 0.090 | |
| regulation of rna splicing | GO:0043484 | 69 | 0.089 | |
| negative regulation of transcription dna templated | GO:0045892 | 237 | 0.086 | |
| meiotic cell cycle | GO:0051321 | 171 | 0.081 | |
| chromatin organization | GO:0006325 | 207 | 0.080 | |
| negative regulation of nucleobase containing compound metabolic process | GO:0045934 | 261 | 0.080 | |
| cell division | GO:0051301 | 248 | 0.074 | |
| cellular amine metabolic process | GO:0044106 | 12 | 0.071 | |
| negative regulation of rna metabolic process | GO:0051253 | 251 | 0.071 | |
| mitotic spindle organization | GO:0007052 | 220 | 0.071 | |
| amine metabolic process | GO:0009308 | 12 | 0.070 | |
| regulation of meiosis | GO:0040020 | 3 | 0.070 | |
| regulation of protein metabolic process | GO:0051246 | 256 | 0.070 | |
| regulation of alternative mrna splicing via spliceosome | GO:0000381 | 60 | 0.065 | |
| nuclear transport | GO:0051169 | 72 | 0.064 | |
| negative regulation of macromolecule biosynthetic process | GO:0010558 | 270 | 0.059 | |
| negative regulation of nucleic acid templated transcription | GO:1903507 | 240 | 0.059 | |
| regulation of cell cycle | GO:0051726 | 291 | 0.057 | |
| organelle fission | GO:0048285 | 340 | 0.057 | |
| nucleosome organization | GO:0034728 | 59 | 0.057 | |
| nuclear division | GO:0000280 | 332 | 0.057 | |
| rrna processing | GO:0006364 | 3 | 0.055 | |
| cellular macromolecular complex assembly | GO:0034622 | 153 | 0.053 | |
| regulation of cell cycle process | GO:0010564 | 181 | 0.053 | |
| cellular component assembly involved in morphogenesis | GO:0010927 | 151 | 0.052 | |
| positive regulation of macromolecule biosynthetic process | GO:0010557 | 283 | 0.051 | |
| negative regulation of biosynthetic process | GO:0009890 | 277 | 0.049 | |
| ribonucleoprotein complex subunit organization | GO:0071826 | 28 | 0.049 | |
| cytokinesis | GO:0000910 | 90 | 0.047 | |
| cellular amino acid metabolic process | GO:0006520 | 61 | 0.047 | |
| positive regulation of cellular amine metabolic process | GO:0033240 | 0 | 0.046 | |
| mitotic cell cycle checkpoint | GO:0007093 | 88 | 0.046 | |
| negative regulation of gene expression epigenetic | GO:0045814 | 77 | 0.045 | |
| catabolic process | GO:0009056 | 409 | 0.045 | |
| cellular ketone metabolic process | GO:0042180 | 24 | 0.044 | |
| chromosome organization | GO:0051276 | 360 | 0.043 | |
| regulation of transcription from rna polymerase ii promoter | GO:0006357 | 378 | 0.043 | |
| regulation of cellular ketone metabolic process | GO:0010565 | 3 | 0.043 | |
| vesicle mediated transport | GO:0016192 | 381 | 0.042 | |
| respiratory system development | GO:0060541 | 213 | 0.040 | |
| homeostatic process | GO:0042592 | 199 | 0.040 | |
| regulation of mrna processing | GO:0050684 | 71 | 0.039 | |
| negative regulation of gene expression | GO:0010629 | 387 | 0.039 | |
| negative regulation of cellular protein metabolic process | GO:0032269 | 85 | 0.039 | |
| body morphogenesis | GO:0010171 | 2 | 0.038 | |
| peptidyl amino acid modification | GO:0018193 | 105 | 0.038 | |
| negative regulation of cellular macromolecule biosynthetic process | GO:2000113 | 267 | 0.038 | |
| chromatin modification | GO:0016568 | 147 | 0.037 | |
| macromolecule catabolic process | GO:0009057 | 161 | 0.037 | |
| alternative mrna splicing via spliceosome | GO:0000380 | 60 | 0.037 | |
| regulation of cellular protein metabolic process | GO:0032268 | 243 | 0.037 | |
| negative regulation of organelle organization | GO:0010639 | 56 | 0.037 | |
| macromolecular complex assembly | GO:0065003 | 256 | 0.037 | |
| small molecule metabolic process | GO:0044281 | 305 | 0.035 | |
| chromatin assembly or disassembly | GO:0006333 | 52 | 0.035 | |
| positive regulation of nitrogen compound metabolic process | GO:0051173 | 354 | 0.035 | |
| negative regulation of cell differentiation | GO:0045596 | 143 | 0.035 | |
| positive regulation of cellular biosynthetic process | GO:0031328 | 316 | 0.035 | |
| organic acid metabolic process | GO:0006082 | 103 | 0.035 | |
| regulation of phosphorus metabolic process | GO:0051174 | 210 | 0.035 | |
| carboxylic acid metabolic process | GO:0019752 | 92 | 0.034 | |
| anatomical structure homeostasis | GO:0060249 | 97 | 0.034 | |
| mitotic dna integrity checkpoint | GO:0044774 | 75 | 0.033 | |
| positive regulation of cell communication | GO:0010647 | 250 | 0.033 | |
| regulation of molecular function | GO:0065009 | 217 | 0.033 | |
| retina development in camera type eye | GO:0060041 | 4 | 0.032 | |
| endocytosis | GO:0006897 | 310 | 0.031 | |
| transcription from rna polymerase ii promoter | GO:0006366 | 368 | 0.031 | |
| epithelial cell differentiation | GO:0030855 | 322 | 0.031 | |
| regulation of cell division | GO:0051302 | 72 | 0.030 | |
| organic substance catabolic process | GO:1901575 | 308 | 0.030 | |
| regulation of programmed cell death | GO:0043067 | 152 | 0.030 | |
| positive regulation of signal transduction | GO:0009967 | 223 | 0.030 | |
| apoptotic process | GO:0006915 | 159 | 0.030 | |
| cellular amide metabolic process | GO:0043603 | 80 | 0.029 | |
| positive regulation of rna biosynthetic process | GO:1902680 | 266 | 0.028 | |
| organonitrogen compound metabolic process | GO:1901564 | 318 | 0.028 | |
| cellular catabolic process | GO:0044248 | 372 | 0.027 | |
| positive regulation of biosynthetic process | GO:0009891 | 316 | 0.027 | |
| regulation of apoptotic process | GO:0042981 | 130 | 0.027 | |
| protein dna complex subunit organization | GO:0071824 | 86 | 0.026 | |
| reproductive system development | GO:0061458 | 74 | 0.026 | |
| positive regulation of response to stimulus | GO:0048584 | 323 | 0.026 | |
| regulation of catalytic activity | GO:0050790 | 185 | 0.026 | |
| cellular response to chemical stimulus | GO:0070887 | 199 | 0.025 | |
| zymogen activation | GO:0031638 | 20 | 0.025 | |
| negative regulation of protein metabolic process | GO:0051248 | 85 | 0.025 | |
| mitotic g2 dna damage checkpoint | GO:0007095 | 69 | 0.025 | |
| oxoacid metabolic process | GO:0043436 | 103 | 0.025 | |
| ribonucleoprotein complex biogenesis | GO:0022613 | 31 | 0.024 | |
| regulation of cell death | GO:0010941 | 173 | 0.023 | |
| nucleocytoplasmic transport | GO:0006913 | 72 | 0.023 | |
| regulation of nuclear division | GO:0051783 | 58 | 0.022 | |
| regulation of phosphorylation | GO:0042325 | 147 | 0.022 | |
| regulation of intracellular signal transduction | GO:1902531 | 236 | 0.022 | |
| regulation of mrna metabolic process | GO:1903311 | 72 | 0.022 | |
| negative regulation of cell cycle process | GO:0010948 | 109 | 0.021 | |
| response to external biotic stimulus | GO:0043207 | 293 | 0.021 | |
| gland morphogenesis | GO:0022612 | 145 | 0.021 | |
| histone exchange | GO:0043486 | 21 | 0.021 | |
| positive regulation of macromolecule metabolic process | GO:0010604 | 405 | 0.021 | |
| phosphorylation | GO:0016310 | 294 | 0.020 | |
| regulation of phosphate metabolic process | GO:0019220 | 210 | 0.020 | |
| positive regulation of intracellular signal transduction | GO:1902533 | 116 | 0.020 | |
| imaginal disc derived wing morphogenesis | GO:0007476 | 337 | 0.020 | |
| positive regulation of signaling | GO:0023056 | 243 | 0.020 | |
| negative regulation of mitotic cell cycle | GO:0045930 | 109 | 0.020 | |
| positive regulation of rna metabolic process | GO:0051254 | 271 | 0.019 | |
| immune response activating signal transduction | GO:0002757 | 2 | 0.019 | |
| golgi organization | GO:0007030 | 66 | 0.019 | |
| regulation of gene expression epigenetic | GO:0040029 | 128 | 0.019 | |
| response to oxidative stress | GO:0006979 | 86 | 0.019 | |
| histone methylation | GO:0016571 | 40 | 0.019 | |
| oocyte differentiation | GO:0009994 | 145 | 0.018 | |
| wing disc morphogenesis | GO:0007472 | 344 | 0.018 | |
| chromosome segregation | GO:0007059 | 157 | 0.018 | |
| cellular response to dna damage stimulus | GO:0006974 | 223 | 0.018 | |
| regulation of cellular amine metabolic process | GO:0033238 | 3 | 0.018 | |
| salivary gland morphogenesis | GO:0007435 | 145 | 0.018 | |
| phagocytosis | GO:0006909 | 215 | 0.018 | |
| intracellular signal transduction | GO:0035556 | 300 | 0.018 | |
| positive regulation of molecular function | GO:0044093 | 136 | 0.018 | |
| organonitrogen compound biosynthetic process | GO:1901566 | 117 | 0.017 | |
| regulation of mitotic cell cycle phase transition | GO:1901990 | 130 | 0.017 | |
| regulation of gene silencing | GO:0060968 | 63 | 0.017 | |
| regulation of mitotic cell cycle | GO:0007346 | 190 | 0.017 | |
| columnar cuboidal epithelial cell differentiation | GO:0002065 | 256 | 0.017 | |
| establishment of localization in cell | GO:0051649 | 402 | 0.017 | |
| establishment or maintenance of cell polarity | GO:0007163 | 167 | 0.017 | |
| mrna cis splicing via spliceosome | GO:0045292 | 1 | 0.016 | |
| protein processing | GO:0016485 | 68 | 0.016 | |
| regulation of multi organism process | GO:0043900 | 131 | 0.016 | |
| eye development | GO:0001654 | 323 | 0.016 | |
| adult behavior | GO:0030534 | 137 | 0.016 | |
| regulation of cysteine type endopeptidase activity | GO:2000116 | 27 | 0.016 | |
| salivary gland development | GO:0007431 | 162 | 0.015 | |
| single organism catabolic process | GO:0044712 | 228 | 0.015 | |
| protein complex assembly | GO:0006461 | 200 | 0.015 | |
| peptide metabolic process | GO:0006518 | 80 | 0.015 | |
| muscle structure development | GO:0061061 | 224 | 0.015 | |
| actin filament based process | GO:0030029 | 220 | 0.015 | |
| growth | GO:0040007 | 359 | 0.015 | |
| dna methylation or demethylation | GO:0044728 | 4 | 0.015 | |
| mitotic g2 m transition checkpoint | GO:0044818 | 70 | 0.015 | |
| single organism biosynthetic process | GO:0044711 | 206 | 0.015 | |
| actin filament organization | GO:0007015 | 126 | 0.015 | |
| transmembrane transport | GO:0055085 | 139 | 0.015 | |
| larval development | GO:0002164 | 104 | 0.014 | |
| dna methylation | GO:0006306 | 4 | 0.014 | |
| camera type eye development | GO:0043010 | 4 | 0.014 | |
| dna packaging | GO:0006323 | 91 | 0.014 | |
| cellular macromolecule catabolic process | GO:0044265 | 136 | 0.014 | |
| actin cytoskeleton organization | GO:0030036 | 206 | 0.014 | |
| ribonucleoprotein complex assembly | GO:0022618 | 23 | 0.014 | |
| cytoplasmic transport | GO:0016482 | 130 | 0.014 | |
| endomembrane system organization | GO:0010256 | 119 | 0.014 | |
| membrane depolarization | GO:0051899 | 4 | 0.014 | |
| mapk cascade | GO:0000165 | 107 | 0.014 | |
| meiotic cell cycle process | GO:1903046 | 132 | 0.014 | |
| spinal cord development | GO:0021510 | 1 | 0.013 | |
| positive regulation of mapk cascade | GO:0043410 | 63 | 0.013 | |
| regulation of ras protein signal transduction | GO:0046578 | 93 | 0.013 | |
| gland development | GO:0048732 | 191 | 0.013 | |
| positive regulation of phosphorus metabolic process | GO:0010562 | 139 | 0.013 | |
| positive regulation of phosphate metabolic process | GO:0045937 | 139 | 0.013 | |
| regulation of protein modification process | GO:0031399 | 112 | 0.013 | |
| negative regulation of cellular component organization | GO:0051129 | 108 | 0.013 | |
| positive regulation of transcription dna templated | GO:0045893 | 266 | 0.013 | |
| negative regulation of apoptotic process | GO:0043066 | 63 | 0.013 | |
| protein alkylation | GO:0008213 | 43 | 0.013 | |
| covalent chromatin modification | GO:0016569 | 106 | 0.012 | |
| protein maturation | GO:0051604 | 71 | 0.012 | |
| cell cell signaling involved in cell fate commitment | GO:0045168 | 210 | 0.012 | |
| muscle organ development | GO:0007517 | 127 | 0.012 | |
| regulation of immune system process | GO:0002682 | 176 | 0.012 | |
| ncrna metabolic process | GO:0034660 | 43 | 0.012 | |
| positive regulation of catalytic activity | GO:0043085 | 118 | 0.012 | |
| regulation of mapk cascade | GO:0043408 | 92 | 0.012 | |
| protein localization to nucleus | GO:0034504 | 55 | 0.012 | |
| ras protein signal transduction | GO:0007265 | 88 | 0.012 | |
| cell type specific apoptotic process | GO:0097285 | 38 | 0.012 | |
| cilium organization | GO:0044782 | 41 | 0.012 | |
| regulation of localization | GO:0032879 | 275 | 0.011 | |
| atp dependent chromatin remodeling | GO:0043044 | 22 | 0.011 | |
| taxis | GO:0042330 | 304 | 0.011 | |
| molting cycle | GO:0042303 | 56 | 0.011 | |
| developmental programmed cell death | GO:0010623 | 138 | 0.011 | |
| histone modification | GO:0016570 | 106 | 0.011 | |
| localization of cell | GO:0051674 | 257 | 0.011 | |
| negative regulation of cell cycle | GO:0045786 | 116 | 0.011 | |
| organophosphate metabolic process | GO:0019637 | 195 | 0.011 | |
| positive regulation of cellular protein metabolic process | GO:0032270 | 118 | 0.011 | |
| protein catabolic process | GO:0030163 | 101 | 0.011 | |
| carbohydrate derivative metabolic process | GO:1901135 | 217 | 0.011 | |
| peptidyl lysine dimethylation | GO:0018027 | 3 | 0.011 | |
| activation of cysteine type endopeptidase activity involved in apoptotic process | GO:0006919 | 16 | 0.011 | |
| organelle localization | GO:0051640 | 148 | 0.011 | |
| positive regulation of nucleobase containing compound metabolic process | GO:0045935 | 332 | 0.010 | |
| cellular protein localization | GO:0034613 | 160 | 0.010 | |
| positive regulation of ras protein signal transduction | GO:0046579 | 43 | 0.010 | |
| positive regulation of proteolysis | GO:0045862 | 52 | 0.010 | |
| peptidyl lysine modification | GO:0018205 | 57 | 0.010 | |
| macromolecule methylation | GO:0043414 | 45 | 0.010 | |
| negative regulation of cell death | GO:0060548 | 81 | 0.010 | |
| negative regulation of protein maturation | GO:1903318 | 31 | 0.010 | |
| internal peptidyl lysine acetylation | GO:0018393 | 38 | 0.010 | |
| response to bacterium | GO:0009617 | 198 | 0.010 | |
| cell cycle phase transition | GO:0044770 | 140 | 0.010 | |
| response to oxygen containing compound | GO:1901700 | 200 | 0.010 | |
| cell motility | GO:0048870 | 251 | 0.010 | |
| organelle assembly | GO:0070925 | 198 | 0.010 | |
| chromatin remodeling | GO:0006338 | 72 | 0.010 | |
| negative regulation of transcription from rna polymerase ii promoter | GO:0000122 | 119 | 0.010 | |
| signal transduction by phosphorylation | GO:0023014 | 107 | 0.010 | |
| spliceosomal snrnp assembly | GO:0000387 | 2 | 0.010 | |
