| rrna processing | GO:0006364 | 3 | 0.618 | Yeast |
| ncrna metabolic process | GO:0034660 | 43 | 0.227 | Yeast |
| ribosomal large subunit biogenesis | GO:0042273 | 1 | 0.178 | |
| regulation of multicellular organismal development | GO:2000026 | 414 | 0.140 | |
| nuclear division | GO:0000280 | 332 | 0.104 | |
| vesicle mediated transport | GO:0016192 | 381 | 0.090 | |
| rna processing | GO:0006396 | 147 | 0.079 | Yeast |
| embryo development ending in birth or egg hatching | GO:0009792 | 152 | 0.071 | |
| defense response | GO:0006952 | 300 | 0.068 | |
| regulation of gene expression epigenetic | GO:0040029 | 128 | 0.063 | |
| positive regulation of growth | GO:0045927 | 75 | 0.062 | |
| gene silencing | GO:0016458 | 138 | 0.062 | |
| regulation of growth | GO:0040008 | 233 | 0.061 | |
| developmental growth | GO:0048589 | 280 | 0.059 | |
| positive regulation of nucleobase containing compound metabolic process | GO:0045935 | 332 | 0.058 | |
| ribonucleoprotein complex biogenesis | GO:0022613 | 31 | 0.057 | Yeast |
| positive regulation of nitrogen compound metabolic process | GO:0051173 | 354 | 0.056 | |
| regulation of cell development | GO:0060284 | 215 | 0.055 | |
| mitotic dna integrity checkpoint | GO:0044774 | 75 | 0.054 | |
| heterocycle catabolic process | GO:0046700 | 166 | 0.052 | |
| cell maturation | GO:0048469 | 144 | 0.051 | |
| organelle fission | GO:0048285 | 340 | 0.051 | |
| defense response to other organism | GO:0098542 | 225 | 0.049 | |
| organelle assembly | GO:0070925 | 198 | 0.049 | |
| positive regulation of developmental growth | GO:0048639 | 62 | 0.048 | |
| positive regulation of developmental process | GO:0051094 | 143 | 0.047 | |
| regulation of developmental growth | GO:0048638 | 174 | 0.047 | |
| immune system process | GO:0002376 | 347 | 0.045 | |
| negative regulation of cellular metabolic process | GO:0031324 | 382 | 0.044 | |
| organic substance catabolic process | GO:1901575 | 308 | 0.044 | |
| positive regulation of macromolecule metabolic process | GO:0010604 | 405 | 0.043 | |
| developmental maturation | GO:0021700 | 172 | 0.039 | |
| amine metabolic process | GO:0009308 | 12 | 0.038 | |
| response to biotic stimulus | GO:0009607 | 294 | 0.037 | |
| cytoplasmic transport | GO:0016482 | 130 | 0.036 | |
| posttranscriptional gene silencing by rna | GO:0035194 | 45 | 0.035 | |
| negative regulation of mitotic cell cycle | GO:0045930 | 109 | 0.034 | |
| regulation of anatomical structure size | GO:0090066 | 163 | 0.034 | |
| endocytosis | GO:0006897 | 310 | 0.033 | |
| organophosphate metabolic process | GO:0019637 | 195 | 0.033 | |
| positive regulation of multicellular organismal process | GO:0051240 | 143 | 0.032 | |
| phagocytosis | GO:0006909 | 215 | 0.032 | |
| response to other organism | GO:0051707 | 293 | 0.030 | |
| negative regulation of mitotic cell cycle phase transition | GO:1901991 | 103 | 0.030 | |
| protein complex biogenesis | GO:0070271 | 201 | 0.029 | |
| cell death | GO:0008219 | 279 | 0.029 | |
| small molecule metabolic process | GO:0044281 | 305 | 0.029 | |
| mitotic nuclear division | GO:0007067 | 213 | 0.029 | |
| body morphogenesis | GO:0010171 | 2 | 0.029 | |
| regulation of neuron differentiation | GO:0045664 | 103 | 0.028 | |
| posttranscriptional gene silencing | GO:0016441 | 46 | 0.028 | |
| response to external biotic stimulus | GO:0043207 | 293 | 0.028 | |
| multicellular organism growth | GO:0035264 | 46 | 0.027 | |
| regulation of cell size | GO:0008361 | 63 | 0.027 | |
| macromolecular complex assembly | GO:0065003 | 256 | 0.027 | |
| negative regulation of cell cycle | GO:0045786 | 116 | 0.026 | |
| protein modification by small protein conjugation or removal | GO:0070647 | 106 | 0.026 | |
| regulation of cell cycle process | GO:0010564 | 181 | 0.026 | |
| epithelial cell differentiation | GO:0030855 | 322 | 0.026 | |
| programmed cell death | GO:0012501 | 257 | 0.026 | |
| dna damage checkpoint | GO:0000077 | 78 | 0.025 | |
| mitotic dna damage checkpoint | GO:0044773 | 74 | 0.024 | |
| response to bacterium | GO:0009617 | 198 | 0.024 | |
| growth | GO:0040007 | 359 | 0.024 | |
| rna localization | GO:0006403 | 115 | 0.024 | |
| organic substance transport | GO:0071702 | 257 | 0.024 | |
| regulation of cell cycle | GO:0051726 | 291 | 0.024 | |
| negative regulation of gene expression | GO:0010629 | 387 | 0.023 | |
| ribosome biogenesis | GO:0042254 | 8 | 0.023 | Yeast |
| single organism intracellular transport | GO:1902582 | 207 | 0.023 | |
| intracellular transport | GO:0046907 | 228 | 0.023 | |
| death | GO:0016265 | 284 | 0.022 | |
| rna phosphodiester bond hydrolysis | GO:0090501 | 17 | 0.022 | Yeast |
| positive regulation of macromolecule biosynthetic process | GO:0010557 | 283 | 0.022 | |
| organic cyclic compound catabolic process | GO:1901361 | 168 | 0.022 | |
| positive regulation of nucleic acid templated transcription | GO:1903508 | 266 | 0.021 | |
| negative regulation of epidermal growth factor receptor signaling pathway | GO:0042059 | 29 | 0.021 | |
| regulation of immune system process | GO:0002682 | 176 | 0.021 | |
| regulation of cell division | GO:0051302 | 72 | 0.020 | |
| cellular protein modification process | GO:0006464 | 438 | 0.020 | |
| regulation of mitotic cell cycle phase transition | GO:1901990 | 130 | 0.020 | |
| regulation of neurogenesis | GO:0050767 | 158 | 0.019 | |
| carboxylic acid metabolic process | GO:0019752 | 92 | 0.019 | |
| regulation of cellular component size | GO:0032535 | 98 | 0.019 | |
| defense response to bacterium | GO:0042742 | 178 | 0.019 | |
| larval development | GO:0002164 | 104 | 0.019 | |
| reproductive structure development | GO:0048608 | 74 | 0.018 | |
| gene silencing by mirna | GO:0035195 | 22 | 0.018 | |
| gliogenesis | GO:0042063 | 80 | 0.018 | |
| nucleoside phosphate catabolic process | GO:1901292 | 110 | 0.018 | |
| positive regulation of transcription dna templated | GO:0045893 | 266 | 0.018 | |
| cellular amine metabolic process | GO:0044106 | 12 | 0.018 | |
| cellular macromolecular complex assembly | GO:0034622 | 153 | 0.018 | |
| purine ribonucleoside monophosphate metabolic process | GO:0009167 | 50 | 0.017 | |
| homeostatic process | GO:0042592 | 199 | 0.017 | |
| positive regulation of gene expression | GO:0010628 | 290 | 0.017 | |
| regulation of organelle organization | GO:0033043 | 196 | 0.017 | |
| single organism biosynthetic process | GO:0044711 | 206 | 0.016 | |
| negative regulation of cell cycle phase transition | GO:1901988 | 103 | 0.016 | |
| positive regulation of rna biosynthetic process | GO:1902680 | 266 | 0.016 | |
| enzyme linked receptor protein signaling pathway | GO:0007167 | 179 | 0.016 | |
| protein complex assembly | GO:0006461 | 200 | 0.016 | |
| regulation of multicellular organism growth | GO:0040014 | 40 | 0.016 | |
| localization of cell | GO:0051674 | 257 | 0.016 | |
| actin cytoskeleton organization | GO:0030036 | 206 | 0.015 | |
| reproductive system development | GO:0061458 | 74 | 0.015 | |
| positive regulation of rna metabolic process | GO:0051254 | 271 | 0.015 | |
| catabolic process | GO:0009056 | 409 | 0.015 | |
| cellular amino acid metabolic process | GO:0006520 | 61 | 0.015 | |
| cellular catabolic process | GO:0044248 | 372 | 0.015 | |
| leg disc development | GO:0035218 | 92 | 0.015 | |
| regulation of response to stress | GO:0080134 | 200 | 0.015 | |
| immune response | GO:0006955 | 246 | 0.015 | |
| nuclear dna replication | GO:0033260 | 1 | 0.015 | |
| cell division | GO:0051301 | 248 | 0.015 | |
| cellular nitrogen compound catabolic process | GO:0044270 | 165 | 0.015 | |
| establishment of localization in cell | GO:0051649 | 402 | 0.015 | |
| nuclear transport | GO:0051169 | 72 | 0.014 | |
| multicellular organismal aging | GO:0010259 | 140 | 0.014 | |
| nuclear transcribed mrna catabolic process | GO:0000956 | 24 | 0.014 | |
| regulation of cell cycle phase transition | GO:1901987 | 130 | 0.014 | |
| regulation of meiosis | GO:0040020 | 3 | 0.014 | |
| cytoplasm organization | GO:0007028 | 64 | 0.013 | |
| positive regulation of cellular biosynthetic process | GO:0031328 | 316 | 0.013 | |
| purine containing compound catabolic process | GO:0072523 | 112 | 0.013 | |
| nucleocytoplasmic transport | GO:0006913 | 72 | 0.013 | |
| mitotic cell cycle checkpoint | GO:0007093 | 88 | 0.013 | |
| axon development | GO:0061564 | 297 | 0.013 | |
| aromatic compound catabolic process | GO:0019439 | 166 | 0.013 | |
| camera type eye development | GO:0043010 | 4 | 0.013 | |
| multi organism reproductive behavior | GO:0044705 | 121 | 0.013 | |
| translation | GO:0006412 | 69 | 0.013 | |
| mitochondrion organization | GO:0007005 | 65 | 0.013 | |
| cellular protein complex assembly | GO:0043623 | 71 | 0.013 | |
| negative regulation of cell cycle process | GO:0010948 | 109 | 0.012 | |
| establishment of protein localization | GO:0045184 | 163 | 0.012 | |
| ribonucleoside metabolic process | GO:0009119 | 127 | 0.012 | |
| positive regulation of response to stimulus | GO:0048584 | 323 | 0.012 | |
| sex differentiation | GO:0007548 | 81 | 0.012 | |
| regulation of phosphorus metabolic process | GO:0051174 | 210 | 0.012 | |
| nucleoside catabolic process | GO:0009164 | 112 | 0.012 | |
| cellular response to chemical stimulus | GO:0070887 | 199 | 0.012 | |
| cellular component assembly involved in morphogenesis | GO:0010927 | 151 | 0.012 | |
| regulation of catalytic activity | GO:0050790 | 185 | 0.012 | |
| exocrine system development | GO:0035272 | 162 | 0.012 | |
| organonitrogen compound metabolic process | GO:1901564 | 318 | 0.012 | |
| negative regulation of cellular biosynthetic process | GO:0031327 | 277 | 0.012 | |
| regulation of apoptotic process | GO:0042981 | 130 | 0.012 | |
| nucleobase containing compound catabolic process | GO:0034655 | 165 | 0.012 | |
| mitotic g2 m transition checkpoint | GO:0044818 | 70 | 0.012 | |
| ribonucleoprotein complex assembly | GO:0022618 | 23 | 0.011 | |
| protein modification process | GO:0036211 | 438 | 0.011 | |
| rna catabolic process | GO:0006401 | 37 | 0.011 | |
| nucleoside metabolic process | GO:0009116 | 127 | 0.011 | |
| cell cycle checkpoint | GO:0000075 | 95 | 0.011 | |
| regulation of embryonic development | GO:0045995 | 68 | 0.011 | |
| nucleobase containing small molecule metabolic process | GO:0055086 | 174 | 0.011 | |
| production of small rna involved in gene silencing by rna | GO:0070918 | 15 | 0.011 | |
| protein localization | GO:0008104 | 284 | 0.011 | |
| molting cycle | GO:0042303 | 56 | 0.011 | |
| regulation of nervous system development | GO:0051960 | 248 | 0.011 | |
| oocyte axis specification | GO:0007309 | 108 | 0.011 | |
| protein transport | GO:0015031 | 155 | 0.011 | |
| purine ribonucleotide metabolic process | GO:0009150 | 145 | 0.011 | |
| positive regulation of immune system process | GO:0002684 | 68 | 0.011 | |
| cell cycle dna replication | GO:0044786 | 23 | 0.011 | |
| nucleotide catabolic process | GO:0009166 | 109 | 0.010 | |
| positive regulation of multicellular organism growth | GO:0040018 | 21 | 0.010 | |
| positive regulation of defense response | GO:0031349 | 59 | 0.010 | |
| nucleoside monophosphate catabolic process | GO:0009125 | 39 | 0.010 | |
| nucleoside triphosphate catabolic process | GO:0009143 | 108 | 0.010 | |
| posttranscriptional regulation of gene expression | GO:0010608 | 145 | 0.010 | |
| regulation of mitotic cell cycle | GO:0007346 | 190 | 0.010 | |
| development of primary sexual characteristics | GO:0045137 | 50 | 0.010 | |
| regulation of cellular protein metabolic process | GO:0032268 | 243 | 0.010 | |
| regulation of epidermal growth factor receptor signaling pathway | GO:0042058 | 42 | 0.010 | |
| negative regulation of nucleic acid templated transcription | GO:1903507 | 240 | 0.010 | |
