| nucleus organization | GO:0006997 | 45 | 0.209 | |
| endocytosis | GO:0006897 | 310 | 0.158 | |
| negative regulation of biosynthetic process | GO:0009890 | 277 | 0.131 | |
| organelle fission | GO:0048285 | 340 | 0.110 | |
| body morphogenesis | GO:0010171 | 2 | 0.107 | |
| organic acid metabolic process | GO:0006082 | 103 | 0.097 | |
| negative regulation of macromolecule biosynthetic process | GO:0010558 | 270 | 0.094 | |
| negative regulation of gene expression | GO:0010629 | 387 | 0.093 | |
| vesicle mediated transport | GO:0016192 | 381 | 0.086 | |
| negative regulation of cellular macromolecule biosynthetic process | GO:2000113 | 267 | 0.072 | |
| negative regulation of cellular biosynthetic process | GO:0031327 | 277 | 0.065 | |
| macromolecular complex assembly | GO:0065003 | 256 | 0.065 | |
| posttranscriptional regulation of gene expression | GO:0010608 | 145 | 0.062 | |
| single organism biosynthetic process | GO:0044711 | 206 | 0.061 | |
| eye development | GO:0001654 | 323 | 0.058 | |
| enzyme linked receptor protein signaling pathway | GO:0007167 | 179 | 0.057 | |
| regulation of protein metabolic process | GO:0051246 | 256 | 0.055 | |
| death | GO:0016265 | 284 | 0.054 | |
| embryo development ending in birth or egg hatching | GO:0009792 | 152 | 0.053 | |
| negative regulation of nucleic acid templated transcription | GO:1903507 | 240 | 0.052 | |
| regulation of cell cycle process | GO:0010564 | 181 | 0.049 | |
| larval development | GO:0002164 | 104 | 0.049 | |
| translation | GO:0006412 | 69 | 0.042 | |
| establishment of protein localization | GO:0045184 | 163 | 0.041 | |
| response to biotic stimulus | GO:0009607 | 294 | 0.040 | |
| gene silencing | GO:0016458 | 138 | 0.038 | |
| nucleocytoplasmic transport | GO:0006913 | 72 | 0.036 | |
| immune system process | GO:0002376 | 347 | 0.034 | |
| chromosome organization | GO:0051276 | 360 | 0.034 | |
| negative regulation of nucleobase containing compound metabolic process | GO:0045934 | 261 | 0.033 | |
| muscle structure development | GO:0061061 | 224 | 0.033 | |
| regulation of mitotic cell cycle | GO:0007346 | 190 | 0.032 | |
| establishment of localization in cell | GO:0051649 | 402 | 0.032 | |
| cellular protein modification process | GO:0006464 | 438 | 0.031 | |
| negative regulation of cellular metabolic process | GO:0031324 | 382 | 0.030 | |
| protein transport | GO:0015031 | 155 | 0.030 | |
| organelle assembly | GO:0070925 | 198 | 0.029 | |
| wing disc morphogenesis | GO:0007472 | 344 | 0.029 | |
| cellular amino acid metabolic process | GO:0006520 | 61 | 0.028 | |
| regulation of gene expression epigenetic | GO:0040029 | 128 | 0.027 | |
| mrna metabolic process | GO:0016071 | 124 | 0.027 | |
| negative regulation of cell cycle | GO:0045786 | 116 | 0.027 | |
| programmed cell death | GO:0012501 | 257 | 0.027 | |
| response to external biotic stimulus | GO:0043207 | 293 | 0.027 | |
| phagocytosis | GO:0006909 | 215 | 0.026 | |
| immune response | GO:0006955 | 246 | 0.026 | |
| cell death | GO:0008219 | 279 | 0.026 | |
| regulation of multicellular organismal development | GO:2000026 | 414 | 0.026 | |
| positive regulation of response to stimulus | GO:0048584 | 323 | 0.025 | |
| regulation of organelle organization | GO:0033043 | 196 | 0.025 | |
| localization of cell | GO:0051674 | 257 | 0.025 | |
| regulation of gene silencing | GO:0060968 | 63 | 0.025 | |
| regulation of intracellular signal transduction | GO:1902531 | 236 | 0.024 | |
| post embryonic appendage morphogenesis | GO:0035120 | 385 | 0.024 | |
| negative regulation of signaling | GO:0023057 | 219 | 0.024 | |
| organic substance transport | GO:0071702 | 257 | 0.023 | |
| positive regulation of catalytic activity | GO:0043085 | 118 | 0.023 | |
| regulation of immune system process | GO:0002682 | 176 | 0.023 | |
| tube development | GO:0035295 | 244 | 0.022 | |
| appendage development | GO:0048736 | 401 | 0.022 | |
| developmental pigmentation | GO:0048066 | 68 | 0.022 | |
| regulation of response to biotic stimulus | GO:0002831 | 63 | 0.022 | |
| ncrna metabolic process | GO:0034660 | 43 | 0.022 | |
| positive regulation of cell communication | GO:0010647 | 250 | 0.021 | |
| eye photoreceptor cell differentiation | GO:0001754 | 145 | 0.021 | |
| regulation of cellular protein metabolic process | GO:0032268 | 243 | 0.021 | |
| protein complex assembly | GO:0006461 | 200 | 0.021 | |
| cell motility | GO:0048870 | 251 | 0.021 | |
| chromatin organization | GO:0006325 | 207 | 0.021 | |
| eye morphogenesis | GO:0048592 | 260 | 0.020 | |
| ras protein signal transduction | GO:0007265 | 88 | 0.020 | |
| regulation of small gtpase mediated signal transduction | GO:0051056 | 93 | 0.020 | |
| negative regulation of mitotic cell cycle phase transition | GO:1901991 | 103 | 0.020 | |
| cytoplasmic transport | GO:0016482 | 130 | 0.019 | |
| cell migration | GO:0016477 | 238 | 0.019 | |
| oxoacid metabolic process | GO:0043436 | 103 | 0.019 | |
| positive regulation of phosphate metabolic process | GO:0045937 | 139 | 0.019 | |
| protein modification process | GO:0036211 | 438 | 0.019 | |
| cell proliferation | GO:0008283 | 299 | 0.019 | |
| positive regulation of biosynthetic process | GO:0009891 | 316 | 0.018 | |
| stem cell maintenance | GO:0019827 | 67 | 0.018 | |
| small molecule metabolic process | GO:0044281 | 305 | 0.018 | |
| nuclear division | GO:0000280 | 332 | 0.018 | |
| dna metabolic process | GO:0006259 | 227 | 0.018 | |
| negative regulation of cell cycle process | GO:0010948 | 109 | 0.017 | |
| imaginal disc derived appendage development | GO:0048737 | 399 | 0.017 | |
| mitotic nuclear division | GO:0007067 | 213 | 0.017 | |
| imaginal disc derived appendage morphogenesis | GO:0035114 | 395 | 0.017 | |
| response to other organism | GO:0051707 | 293 | 0.017 | |
| reproductive system development | GO:0061458 | 74 | 0.017 | |
| positive regulation of signaling | GO:0023056 | 243 | 0.016 | |
| intracellular transport | GO:0046907 | 228 | 0.016 | |
| positive regulation of cellular biosynthetic process | GO:0031328 | 316 | 0.016 | |
| negative regulation of cell death | GO:0060548 | 81 | 0.015 | |
| gland development | GO:0048732 | 191 | 0.015 | |
| cellular response to chemical stimulus | GO:0070887 | 199 | 0.015 | |
| negative regulation of response to stimulus | GO:0048585 | 258 | 0.015 | |
| nuclear transport | GO:0051169 | 72 | 0.015 | |
| chromatin silencing | GO:0006342 | 76 | 0.014 | |
| regulation of cell cycle | GO:0051726 | 291 | 0.014 | |
| negative regulation of nitrogen compound metabolic process | GO:0051172 | 265 | 0.014 | |
| organonitrogen compound metabolic process | GO:1901564 | 318 | 0.014 | |
| organic substance catabolic process | GO:1901575 | 308 | 0.014 | |
| negative regulation of cell communication | GO:0010648 | 223 | 0.014 | |
| mrna processing | GO:0006397 | 104 | 0.013 | |
| regulation of chromatin silencing | GO:0031935 | 36 | 0.013 | |
| appendage morphogenesis | GO:0035107 | 397 | 0.013 | |
| negative regulation of gene expression epigenetic | GO:0045814 | 77 | 0.013 | |
| nucleobase containing compound catabolic process | GO:0034655 | 165 | 0.013 | |
| protein complex biogenesis | GO:0070271 | 201 | 0.013 | |
| regulation of mitotic cell cycle phase transition | GO:1901990 | 130 | 0.013 | |
| positive regulation of phosphorus metabolic process | GO:0010562 | 139 | 0.013 | |
| multi organism behavior | GO:0051705 | 175 | 0.012 | |
| digestive tract morphogenesis | GO:0048546 | 127 | 0.012 | |
| single organism behavior | GO:0044708 | 391 | 0.012 | |
| protein localization to nucleus | GO:0034504 | 55 | 0.012 | |
| negative regulation of intrinsic apoptotic signaling pathway | GO:2001243 | 1 | 0.012 | |
| regulation of catalytic activity | GO:0050790 | 185 | 0.012 | |
| cognition | GO:0050890 | 141 | 0.012 | |
| aromatic compound catabolic process | GO:0019439 | 166 | 0.012 | |
| negative regulation of rna metabolic process | GO:0051253 | 251 | 0.012 | |
| cellular catabolic process | GO:0044248 | 372 | 0.011 | |
| nuclear export | GO:0051168 | 24 | 0.011 | |
| head development | GO:0060322 | 135 | 0.011 | |
| single organism intracellular transport | GO:1902582 | 207 | 0.011 | |
| regulation of anatomical structure morphogenesis | GO:0022603 | 242 | 0.011 | |
| cytoplasmic translation | GO:0002181 | 0 | 0.011 | |
| membrane organization | GO:0061024 | 112 | 0.011 | |
| positive regulation of gene expression | GO:0010628 | 290 | 0.011 | |
| formation of a compartment boundary | GO:0060288 | 4 | 0.011 | |
| positive regulation of macromolecule biosynthetic process | GO:0010557 | 283 | 0.011 | |
| regulation of cell death | GO:0010941 | 173 | 0.011 | |
| immune system development | GO:0002520 | 57 | 0.011 | |
| regulation of translation | GO:0006417 | 56 | 0.011 | |
| regulation of molecular function | GO:0065009 | 217 | 0.011 | |
| pigmentation | GO:0043473 | 75 | 0.011 | |
| positive regulation of protein metabolic process | GO:0051247 | 128 | 0.011 | |
| histone modification | GO:0016570 | 106 | 0.011 | |
| regulation of immune response | GO:0050776 | 118 | 0.011 | |
| cell recognition | GO:0008037 | 102 | 0.011 | |
| cellular response to nutrient | GO:0031670 | 1 | 0.011 | |
| positive regulation of cellular protein metabolic process | GO:0032270 | 118 | 0.011 | |
| regulation of apoptotic process | GO:0042981 | 130 | 0.010 | |
| dendrite development | GO:0016358 | 204 | 0.010 | |
| positive regulation of multicellular organismal process | GO:0051240 | 143 | 0.010 | |
| reproductive structure development | GO:0048608 | 74 | 0.010 | |
| eye photoreceptor cell development | GO:0042462 | 81 | 0.010 | |
| gonad development | GO:0008406 | 50 | 0.010 | |
| carboxylic acid metabolic process | GO:0019752 | 92 | 0.010 | |
| regulation of cell differentiation | GO:0045595 | 302 | 0.010 | |