| cellular catabolic process | GO:0044248 | 372 | 0.271 | Human |
| protein localization | GO:0008104 | 284 | 0.176 | |
| cellular response to dna damage stimulus | GO:0006974 | 223 | 0.168 | |
| regulation of cell morphogenesis | GO:0022604 | 163 | 0.126 | |
| heterocycle catabolic process | GO:0046700 | 166 | 0.118 | Human |
| cgmp metabolic process | GO:0046068 | 11 | 0.117 | |
| organic substance catabolic process | GO:1901575 | 308 | 0.109 | Human |
| regulation of cellular protein metabolic process | GO:0032268 | 243 | 0.105 | |
| catabolic process | GO:0009056 | 409 | 0.097 | Human |
| endocytosis | GO:0006897 | 310 | 0.096 | |
| chromosome organization | GO:0051276 | 360 | 0.096 | |
| regulation of cellular response to stress | GO:0080135 | 89 | 0.093 | |
| negative regulation of cellular biosynthetic process | GO:0031327 | 277 | 0.090 | |
| posttranscriptional regulation of gene expression | GO:0010608 | 145 | 0.089 | |
| regulation of protein metabolic process | GO:0051246 | 256 | 0.089 | |
| single organism intracellular transport | GO:1902582 | 207 | 0.085 | |
| single organism cellular localization | GO:1902580 | 180 | 0.078 | |
| cellular macromolecule catabolic process | GO:0044265 | 136 | 0.077 | |
| protein modification process | GO:0036211 | 438 | 0.076 | |
| regulation of cell shape | GO:0008360 | 113 | 0.074 | |
| organic cyclic compound catabolic process | GO:1901361 | 168 | 0.071 | Human |
| single organism catabolic process | GO:0044712 | 228 | 0.071 | Human |
| regulation of localization | GO:0032879 | 275 | 0.066 | |
| compound eye development | GO:0048749 | 307 | 0.063 | |
| regulation of response to stress | GO:0080134 | 200 | 0.062 | |
| eye development | GO:0001654 | 323 | 0.058 | |
| vesicle mediated transport | GO:0016192 | 381 | 0.054 | |
| negative regulation of nucleic acid templated transcription | GO:1903507 | 240 | 0.052 | |
| regulation of anatomical structure morphogenesis | GO:0022603 | 242 | 0.046 | |
| compound eye morphogenesis | GO:0001745 | 249 | 0.045 | |
| regulation of neuron differentiation | GO:0045664 | 103 | 0.045 | |
| photoreceptor cell differentiation | GO:0046530 | 170 | 0.043 | |
| establishment of protein localization | GO:0045184 | 163 | 0.043 | |
| carbohydrate derivative metabolic process | GO:1901135 | 217 | 0.043 | Human |
| lateral inhibition | GO:0046331 | 206 | 0.039 | |
| stem cell differentiation | GO:0048863 | 117 | 0.039 | |
| nucleoside metabolic process | GO:0009116 | 127 | 0.039 | Human |
| negative regulation of nucleobase containing compound metabolic process | GO:0045934 | 261 | 0.038 | |
| developmental growth | GO:0048589 | 280 | 0.037 | |
| body morphogenesis | GO:0010171 | 2 | 0.037 | |
| cellular nitrogen compound catabolic process | GO:0044270 | 165 | 0.036 | Human |
| negative regulation of cellular metabolic process | GO:0031324 | 382 | 0.035 | |
| regulation of cellular component biogenesis | GO:0044087 | 201 | 0.033 | |
| cell cycle phase transition | GO:0044770 | 140 | 0.033 | |
| nucleobase containing compound catabolic process | GO:0034655 | 165 | 0.033 | Human |
| nucleotide catabolic process | GO:0009166 | 109 | 0.033 | Human |
| regulation of translation | GO:0006417 | 56 | 0.033 | |
| regulation of organelle organization | GO:0033043 | 196 | 0.033 | Human Mouse |
| compound eye photoreceptor cell differentiation | GO:0001751 | 140 | 0.032 | |
| nucleobase containing small molecule metabolic process | GO:0055086 | 174 | 0.032 | Human |
| negative regulation of cell communication | GO:0010648 | 223 | 0.031 | |
| positive regulation of multicellular organismal process | GO:0051240 | 143 | 0.031 | |
| positive regulation of developmental process | GO:0051094 | 143 | 0.031 | |
| membrane organization | GO:0061024 | 112 | 0.030 | |
| covalent chromatin modification | GO:0016569 | 106 | 0.030 | |
| modification dependent protein catabolic process | GO:0019941 | 78 | 0.029 | |
| cellular response to starvation | GO:0009267 | 61 | 0.029 | |
| mitotic cell cycle phase transition | GO:0044772 | 138 | 0.028 | |
| negative regulation of signaling | GO:0023057 | 219 | 0.028 | |
| macromolecular complex assembly | GO:0065003 | 256 | 0.028 | |
| photoreceptor cell development | GO:0042461 | 96 | 0.028 | |
| regionalization | GO:0003002 | 416 | 0.027 | Mouse |
| spermatogenesis | GO:0007283 | 200 | 0.027 | |
| aromatic compound catabolic process | GO:0019439 | 166 | 0.027 | Human |
| negative regulation of rna biosynthetic process | GO:1902679 | 240 | 0.026 | |
| glycoprotein metabolic process | GO:0009100 | 41 | 0.026 | |
| response to organic substance | GO:0010033 | 284 | 0.026 | |
| vesicle organization | GO:0016050 | 44 | 0.026 | |
| protein complex assembly | GO:0006461 | 200 | 0.025 | |
| intracellular transport | GO:0046907 | 228 | 0.024 | |
| hematopoietic or lymphoid organ development | GO:0048534 | 57 | 0.024 | Mouse |
| ribonucleotide catabolic process | GO:0009261 | 109 | 0.023 | Human |
| negative regulation of gene expression | GO:0010629 | 387 | 0.023 | |
| cell cycle checkpoint | GO:0000075 | 95 | 0.023 | |
| dendrite development | GO:0016358 | 204 | 0.022 | |
| macromolecule catabolic process | GO:0009057 | 161 | 0.022 | |
| organonitrogen compound metabolic process | GO:1901564 | 318 | 0.022 | Human |
| ribonucleotide metabolic process | GO:0009259 | 145 | 0.021 | Human |
| regulation of multicellular organismal development | GO:2000026 | 414 | 0.021 | |
| histone modification | GO:0016570 | 106 | 0.021 | |
| actin cytoskeleton organization | GO:0030036 | 206 | 0.020 | Human Mouse |
| small gtpase mediated signal transduction | GO:0007264 | 88 | 0.020 | Rat |
| purine containing compound metabolic process | GO:0072521 | 155 | 0.020 | Human |
| cellular response to organic substance | GO:0071310 | 132 | 0.020 | |
| cell death | GO:0008219 | 279 | 0.020 | |
| chromatin modification | GO:0016568 | 147 | 0.019 | |
| negative regulation of rna metabolic process | GO:0051253 | 251 | 0.019 | |
| programmed cell death | GO:0012501 | 257 | 0.019 | |
| negative regulation of biosynthetic process | GO:0009890 | 277 | 0.019 | |
| cell motility | GO:0048870 | 251 | 0.019 | |
| intracellular signal transduction | GO:0035556 | 300 | 0.019 | |
| protein localization to organelle | GO:0033365 | 82 | 0.019 | |
| regulation of cell cycle phase transition | GO:1901987 | 130 | 0.019 | |
| localization of cell | GO:0051674 | 257 | 0.019 | |
| cellular macromolecular complex assembly | GO:0034622 | 153 | 0.018 | |
| establishment of protein localization to organelle | GO:0072594 | 62 | 0.018 | |
| actin filament organization | GO:0007015 | 126 | 0.018 | |
| negative regulation of response to stimulus | GO:0048585 | 258 | 0.018 | |
| cgmp biosynthetic process | GO:0006182 | 8 | 0.018 | |
| stem cell development | GO:0048864 | 79 | 0.018 | |
| regulation of transport | GO:0051049 | 181 | 0.017 | |
| positive regulation of molecular function | GO:0044093 | 136 | 0.017 | |
| eye morphogenesis | GO:0048592 | 260 | 0.017 | |
| single organism behavior | GO:0044708 | 391 | 0.017 | |
| death | GO:0016265 | 284 | 0.017 | |
| camera type eye development | GO:0043010 | 4 | 0.017 | |
| sensory organ morphogenesis | GO:0090596 | 260 | 0.017 | |
| retrograde transport endosome to golgi | GO:0042147 | 3 | 0.017 | |
| cellular response to chemical stimulus | GO:0070887 | 199 | 0.017 | |
| anterior posterior pattern specification | GO:0009952 | 136 | 0.017 | Mouse |
| carbohydrate derivative biosynthetic process | GO:1901137 | 85 | 0.017 | |
| regulation of purine nucleotide biosynthetic process | GO:1900371 | 14 | 0.017 | |
| protein transport | GO:0015031 | 155 | 0.017 | |
| organelle assembly | GO:0070925 | 198 | 0.017 | |
| muscle structure development | GO:0061061 | 224 | 0.016 | Zebrafish |
| positive regulation of cell communication | GO:0010647 | 250 | 0.016 | |
| embryo development ending in birth or egg hatching | GO:0009792 | 152 | 0.016 | |
| regulation of hemocyte proliferation | GO:0035206 | 37 | 0.016 | |
| phagocytosis | GO:0006909 | 215 | 0.016 | |
| proteasomal protein catabolic process | GO:0010498 | 59 | 0.016 | |
| rrna processing | GO:0006364 | 3 | 0.016 | |
| atp metabolic process | GO:0046034 | 49 | 0.016 | |
| actin filament based process | GO:0030029 | 220 | 0.016 | Human Mouse |
| male gamete generation | GO:0048232 | 201 | 0.016 | |
| cellular macromolecule localization | GO:0070727 | 220 | 0.016 | |
| negative regulation of nitrogen compound metabolic process | GO:0051172 | 265 | 0.016 | |
| regulation of mrna metabolic process | GO:1903311 | 72 | 0.016 | |
| response to extracellular stimulus | GO:0009991 | 116 | 0.015 | |
| negative regulation of signal transduction | GO:0009968 | 206 | 0.015 | |
| eye photoreceptor cell differentiation | GO:0001754 | 145 | 0.015 | |
| protein modification by small protein conjugation or removal | GO:0070647 | 106 | 0.015 | |
| cellular protein localization | GO:0034613 | 160 | 0.015 | |
| response to lipopolysaccharide | GO:0032496 | 4 | 0.015 | |
| ribose phosphate metabolic process | GO:0019693 | 145 | 0.015 | Human |
| regulation of cellular localization | GO:0060341 | 136 | 0.015 | |
| positive regulation of catalytic activity | GO:0043085 | 118 | 0.014 | |
| regulation of cell development | GO:0060284 | 215 | 0.014 | |
| regulation of protein stability | GO:0031647 | 43 | 0.014 | |
| single organism membrane organization | GO:0044802 | 93 | 0.014 | |
| regulation of response to external stimulus | GO:0032101 | 115 | 0.014 | |
| meiotic cell cycle | GO:0051321 | 171 | 0.014 | |
| establishment of localization in cell | GO:0051649 | 402 | 0.014 | |
| immune system development | GO:0002520 | 57 | 0.014 | Mouse |
| positive regulation of cellular component organization | GO:0051130 | 156 | 0.014 | |
| positive regulation of protein metabolic process | GO:0051247 | 128 | 0.014 | |
| endomembrane system organization | GO:0010256 | 119 | 0.013 | |
| purine nucleoside triphosphate catabolic process | GO:0009146 | 108 | 0.013 | Human |
| ribonucleoside catabolic process | GO:0042454 | 112 | 0.013 | Human |
| organic substance transport | GO:0071702 | 257 | 0.013 | |
| ovulation cycle | GO:0042698 | 1 | 0.013 | |
| cellular response to nitrogen compound | GO:1901699 | 51 | 0.013 | |
| organelle fission | GO:0048285 | 340 | 0.012 | |
| regulation of photoreceptor cell differentiation | GO:0046532 | 34 | 0.012 | |
| cellular protein complex assembly | GO:0043623 | 71 | 0.012 | |
| larval development | GO:0002164 | 104 | 0.012 | |
| scf dependent proteasomal ubiquitin dependent protein catabolic process | GO:0031146 | 1 | 0.012 | |
| response to axon injury | GO:0048678 | 12 | 0.012 | |
| single organism biosynthetic process | GO:0044711 | 206 | 0.011 | |
| ribonucleoside triphosphate catabolic process | GO:0009203 | 108 | 0.011 | Human |
| hemopoiesis | GO:0030097 | 46 | 0.011 | |
| regulation of phosphorus metabolic process | GO:0051174 | 210 | 0.011 | |
| regulation of protein modification process | GO:0031399 | 112 | 0.011 | |
| nucleoside triphosphate metabolic process | GO:0009141 | 120 | 0.011 | Human |
| maintenance of location | GO:0051235 | 73 | 0.011 | |
| positive regulation of cell projection organization | GO:0031346 | 29 | 0.011 | |
| mitotic cell cycle checkpoint | GO:0007093 | 88 | 0.011 | |
| translation | GO:0006412 | 69 | 0.011 | |
| cytoplasmic transport | GO:0016482 | 130 | 0.011 | |
| compound eye photoreceptor development | GO:0042051 | 78 | 0.011 | |
| tor signaling | GO:0031929 | 32 | 0.011 | |
| cytoskeleton dependent intracellular transport | GO:0030705 | 44 | 0.011 | |
| response to radiation | GO:0009314 | 155 | 0.011 | |
| cellular protein modification process | GO:0006464 | 438 | 0.011 | |
| cellular response to nutrient levels | GO:0031669 | 62 | 0.011 | |
| positive regulation of cgmp biosynthetic process | GO:0030828 | 1 | 0.011 | |
| homeostatic process | GO:0042592 | 199 | 0.010 | |
| ncrna processing | GO:0034470 | 30 | 0.010 | |
| cellular protein catabolic process | GO:0044257 | 83 | 0.010 | |
| intermediate filament based process | GO:0045103 | 1 | 0.010 | |
| ncrna metabolic process | GO:0034660 | 43 | 0.010 | |
| proteolysis involved in cellular protein catabolic process | GO:0051603 | 83 | 0.010 | |
| nucleoside triphosphate catabolic process | GO:0009143 | 108 | 0.010 | Human |
| dendrite morphogenesis | GO:0048813 | 199 | 0.010 | |
| protein complex biogenesis | GO:0070271 | 201 | 0.010 | |
| positive regulation of biosynthetic process | GO:0009891 | 316 | 0.010 | |
| regulation of transcription from rna polymerase ii promoter | GO:0006357 | 378 | 0.010 | |
| positive regulation of cell cycle | GO:0045787 | 43 | 0.010 | |