| cellular protein modification process | GO:0006464 | 438 | 0.097 | |
| catabolic process | GO:0009056 | 409 | 0.073 | |
| protein modification by small protein conjugation or removal | GO:0070647 | 106 | 0.071 | |
| cellular protein catabolic process | GO:0044257 | 83 | 0.070 | |
| organelle fission | GO:0048285 | 340 | 0.067 | |
| small molecule metabolic process | GO:0044281 | 305 | 0.060 | |
| protein modification process | GO:0036211 | 438 | 0.058 | |
| camera type eye development | GO:0043010 | 4 | 0.057 | |
| defense response | GO:0006952 | 300 | 0.056 | |
| macromolecule catabolic process | GO:0009057 | 161 | 0.055 | |
| cellular macromolecule catabolic process | GO:0044265 | 136 | 0.054 | |
| organic acid metabolic process | GO:0006082 | 103 | 0.054 | |
| cellular response to dna damage stimulus | GO:0006974 | 223 | 0.052 | |
| cellular catabolic process | GO:0044248 | 372 | 0.052 | |
| protein deubiquitination | GO:0016579 | 17 | 0.049 | |
| compound eye morphogenesis | GO:0001745 | 249 | 0.042 | |
| modification dependent macromolecule catabolic process | GO:0043632 | 79 | 0.042 | |
| protein catabolic process | GO:0030163 | 101 | 0.041 | |
| cell proliferation | GO:0008283 | 299 | 0.037 | |
| response to oxygen containing compound | GO:1901700 | 200 | 0.036 | |
| protein modification by small protein removal | GO:0070646 | 28 | 0.035 | |
| cellular response to chemical stimulus | GO:0070887 | 199 | 0.034 | |
| intracellular signal transduction | GO:0035556 | 300 | 0.034 | |
| organic substance catabolic process | GO:1901575 | 308 | 0.033 | |
| regulation of phosphorus metabolic process | GO:0051174 | 210 | 0.032 | |
| regionalization | GO:0003002 | 416 | 0.032 | |
| vesicle mediated transport | GO:0016192 | 381 | 0.032 | |
| positive regulation of cellular protein metabolic process | GO:0032270 | 118 | 0.032 | |
| protein modification by small protein conjugation | GO:0032446 | 79 | 0.030 | |
| eye photoreceptor cell differentiation | GO:0001754 | 145 | 0.030 | |
| positive regulation of catabolic process | GO:0009896 | 105 | 0.029 | |
| negative regulation of biosynthetic process | GO:0009890 | 277 | 0.029 | |
| carboxylic acid metabolic process | GO:0019752 | 92 | 0.028 | |
| ubiquitin dependent protein catabolic process | GO:0006511 | 78 | 0.027 | |
| regulation of catabolic process | GO:0009894 | 170 | 0.027 | |
| regulation of gene expression epigenetic | GO:0040029 | 128 | 0.026 | |
| regulation of cellular catabolic process | GO:0031329 | 157 | 0.026 | |
| eye development | GO:0001654 | 323 | 0.026 | |
| response to organic substance | GO:0010033 | 284 | 0.025 | |
| oxoacid metabolic process | GO:0043436 | 103 | 0.025 | |
| cellular amino acid metabolic process | GO:0006520 | 61 | 0.025 | |
| proteolysis | GO:0006508 | 192 | 0.025 | |
| regulation of protein metabolic process | GO:0051246 | 256 | 0.024 | |
| proteasome mediated ubiquitin dependent protein catabolic process | GO:0043161 | 54 | 0.024 | |
| organonitrogen compound metabolic process | GO:1901564 | 318 | 0.024 | |
| regulation of immune system process | GO:0002682 | 176 | 0.024 | |
| chromosome organization | GO:0051276 | 360 | 0.023 | |
| regulation of cellular protein metabolic process | GO:0032268 | 243 | 0.023 | |
| regulation of cellular ketone metabolic process | GO:0010565 | 3 | 0.023 | |
| posttranscriptional gene silencing by rna | GO:0035194 | 45 | 0.023 | |
| modification dependent protein catabolic process | GO:0019941 | 78 | 0.023 | |
| positive regulation of protein metabolic process | GO:0051247 | 128 | 0.023 | |
| sensory organ morphogenesis | GO:0090596 | 260 | 0.022 | |
| proteasomal protein catabolic process | GO:0010498 | 59 | 0.022 | |
| proteolysis involved in cellular protein catabolic process | GO:0051603 | 83 | 0.022 | |
| negative regulation of nucleobase containing compound metabolic process | GO:0045934 | 261 | 0.022 | |
| response to alcohol | GO:0097305 | 95 | 0.022 | |
| actin filament based process | GO:0030029 | 220 | 0.022 | |
| imaginal disc derived wing morphogenesis | GO:0007476 | 337 | 0.022 | |
| compound eye development | GO:0048749 | 307 | 0.022 | |
| organic substance transport | GO:0071702 | 257 | 0.022 | |
| regulation of molecular function | GO:0065009 | 217 | 0.021 | |
| positive regulation of cellular catabolic process | GO:0031331 | 95 | 0.021 | |
| positive regulation of nitrogen compound metabolic process | GO:0051173 | 354 | 0.021 | |
| response to external biotic stimulus | GO:0043207 | 293 | 0.021 | |
| immune system process | GO:0002376 | 347 | 0.021 | |
| organophosphate metabolic process | GO:0019637 | 195 | 0.020 | |
| gland development | GO:0048732 | 191 | 0.020 | |
| regulation of phosphate metabolic process | GO:0019220 | 210 | 0.020 | |
| cell death | GO:0008219 | 279 | 0.020 | |
| macromolecular complex assembly | GO:0065003 | 256 | 0.020 | |
| cellular macromolecular complex assembly | GO:0034622 | 153 | 0.019 | |
| camera type eye morphogenesis | GO:0048593 | 2 | 0.019 | |
| endocytosis | GO:0006897 | 310 | 0.019 | |
| actin cytoskeleton organization | GO:0030036 | 206 | 0.019 | |
| dna metabolic process | GO:0006259 | 227 | 0.019 | |
| protein localization | GO:0008104 | 284 | 0.019 | |
| positive regulation of nucleobase containing compound metabolic process | GO:0045935 | 332 | 0.019 | |
| regulation of organelle organization | GO:0033043 | 196 | 0.019 | |
| positive regulation of hydrolase activity | GO:0051345 | 78 | 0.019 | |
| positive regulation of nucleic acid templated transcription | GO:1903508 | 266 | 0.019 | |
| regulation of protein modification process | GO:0031399 | 112 | 0.019 | |
| cellular response to organic substance | GO:0071310 | 132 | 0.018 | |
| growth | GO:0040007 | 359 | 0.018 | |
| imaginal disc derived appendage morphogenesis | GO:0035114 | 395 | 0.018 | |
| chromosome segregation | GO:0007059 | 157 | 0.018 | |
| transmembrane transport | GO:0055085 | 139 | 0.018 | |
| imaginal disc derived appendage development | GO:0048737 | 399 | 0.018 | |
| positive regulation of response to stimulus | GO:0048584 | 323 | 0.017 | |
| positive regulation of protein modification process | GO:0031401 | 58 | 0.017 | |
| mrna processing | GO:0006397 | 104 | 0.017 | |
| phagocytosis | GO:0006909 | 215 | 0.017 | |
| regulation of catalytic activity | GO:0050790 | 185 | 0.017 | |
| regulation of multicellular organismal development | GO:2000026 | 414 | 0.017 | |
| rna splicing via transesterification reactions with bulged adenosine as nucleophile | GO:0000377 | 73 | 0.017 | |
| gene silencing | GO:0016458 | 138 | 0.016 | |
| mrna splicing via spliceosome | GO:0000398 | 73 | 0.016 | |
| regulation of intracellular signal transduction | GO:1902531 | 236 | 0.016 | |
| wing disc morphogenesis | GO:0007472 | 344 | 0.016 | |
| regulation of immune response | GO:0050776 | 118 | 0.016 | |
| response to other organism | GO:0051707 | 293 | 0.016 | |
| compound eye photoreceptor cell differentiation | GO:0001751 | 140 | 0.016 | |
| organic cyclic compound catabolic process | GO:1901361 | 168 | 0.016 | |
| single organism biosynthetic process | GO:0044711 | 206 | 0.016 | |
| positive regulation of macromolecule metabolic process | GO:0010604 | 405 | 0.016 | |
| protein complex biogenesis | GO:0070271 | 201 | 0.016 | |
| carbohydrate derivative metabolic process | GO:1901135 | 217 | 0.016 | |
| response to wounding | GO:0009611 | 94 | 0.016 | |
| mrna metabolic process | GO:0016071 | 124 | 0.016 | |
| single organism behavior | GO:0044708 | 391 | 0.016 | |
| cell migration | GO:0016477 | 238 | 0.016 | |
| chromatin modification | GO:0016568 | 147 | 0.015 | |
| organonitrogen compound catabolic process | GO:1901565 | 128 | 0.015 | |
| positive regulation of proteolysis | GO:0045862 | 52 | 0.015 | |
| negative regulation of multicellular organismal process | GO:0051241 | 142 | 0.015 | |
| mitotic nuclear division | GO:0007067 | 213 | 0.015 | |
| mitotic spindle organization | GO:0007052 | 220 | 0.015 | |
| ras protein signal transduction | GO:0007265 | 88 | 0.015 | |
| carbohydrate derivative catabolic process | GO:1901136 | 118 | 0.015 | |
| cell motility | GO:0048870 | 251 | 0.015 | |
| positive regulation of signaling | GO:0023056 | 243 | 0.015 | |
| single organism catabolic process | GO:0044712 | 228 | 0.015 | |
| pigment biosynthetic process | GO:0046148 | 36 | 0.015 | |
| response to biotic stimulus | GO:0009607 | 294 | 0.015 | |
| death | GO:0016265 | 284 | 0.015 | |
| regulation of proteolysis | GO:0030162 | 87 | 0.015 | |
| ribonucleotide metabolic process | GO:0009259 | 145 | 0.015 | |
| regulation of hydrolase activity | GO:0051336 | 97 | 0.014 | |
| small gtpase mediated signal transduction | GO:0007264 | 88 | 0.014 | |
| regulation of cell proliferation | GO:0042127 | 163 | 0.014 | |
| molting cycle | GO:0042303 | 56 | 0.014 | |
| rna processing | GO:0006396 | 147 | 0.014 | |
| signal transduction in response to dna damage | GO:0042770 | 3 | 0.014 | |
| negative regulation of rna biosynthetic process | GO:1902679 | 240 | 0.014 | |
| negative regulation of cell differentiation | GO:0045596 | 143 | 0.014 | |
| cellular amine metabolic process | GO:0044106 | 12 | 0.014 | |
| regulation of response to stress | GO:0080134 | 200 | 0.014 | |
| purine ribonucleoside catabolic process | GO:0046130 | 112 | 0.014 | |
| negative regulation of cellular biosynthetic process | GO:0031327 | 277 | 0.014 | |
| positive regulation of phosphorus metabolic process | GO:0010562 | 139 | 0.014 | |
| post embryonic appendage morphogenesis | GO:0035120 | 385 | 0.014 | |
| nucleobase containing small molecule metabolic process | GO:0055086 | 174 | 0.014 | |
| organelle assembly | GO:0070925 | 198 | 0.013 | |
| purine ribonucleotide metabolic process | GO:0009150 | 145 | 0.013 | |
| regulation of transcription from rna polymerase ii promoter | GO:0006357 | 378 | 0.013 | |
| rna splicing via transesterification reactions | GO:0000375 | 73 | 0.013 | |
| positive regulation of proteolysis involved in cellular protein catabolic process | GO:1903052 | 24 | 0.013 | |
| positive regulation of phosphate metabolic process | GO:0045937 | 139 | 0.013 | |
| regulation of cellular amino acid metabolic process | GO:0006521 | 0 | 0.013 | |
| negative regulation of gene expression epigenetic | GO:0045814 | 77 | 0.013 | |
| negative regulation of cellular metabolic process | GO:0031324 | 382 | 0.013 | |
| organophosphate catabolic process | GO:0046434 | 112 | 0.013 | |
| dendrite development | GO:0016358 | 204 | 0.013 | |
| appendage morphogenesis | GO:0035107 | 397 | 0.013 | |
| phosphorylation | GO:0016310 | 294 | 0.013 | |
| intracellular transport | GO:0046907 | 228 | 0.013 | |
| innate immune response | GO:0045087 | 144 | 0.012 | |
| transcription from rna polymerase ii promoter | GO:0006366 | 368 | 0.012 | |
| mapk cascade | GO:0000165 | 107 | 0.012 | |
| cellular homeostasis | GO:0019725 | 80 | 0.012 | |
| rhabdomere development | GO:0042052 | 38 | 0.012 | |
| compound eye photoreceptor development | GO:0042051 | 78 | 0.012 | |
| male gamete generation | GO:0048232 | 201 | 0.012 | |
| positive regulation of cell motility | GO:2000147 | 3 | 0.012 | |
| nucleoside phosphate metabolic process | GO:0006753 | 162 | 0.012 | |
| regulation of wnt signaling pathway | GO:0030111 | 68 | 0.012 | |
| positive regulation of macromolecule biosynthetic process | GO:0010557 | 283 | 0.012 | |
| central nervous system development | GO:0007417 | 201 | 0.012 | |
| photoreceptor cell differentiation | GO:0046530 | 170 | 0.012 | |
| eye photoreceptor cell development | GO:0042462 | 81 | 0.012 | |
| cell projection assembly | GO:0030031 | 94 | 0.012 | |
| negative regulation of rna metabolic process | GO:0051253 | 251 | 0.012 | |
| negative regulation of nitrogen compound metabolic process | GO:0051172 | 265 | 0.012 | |
| body morphogenesis | GO:0010171 | 2 | 0.011 | |
| rna splicing | GO:0008380 | 83 | 0.011 | |
| cellular ketone metabolic process | GO:0042180 | 24 | 0.011 | |
| ameboidal type cell migration | GO:0001667 | 151 | 0.011 | |
| negative regulation of gene expression | GO:0010629 | 387 | 0.011 | |
| response to nitrogen compound | GO:1901698 | 90 | 0.011 | |
| tissue migration | GO:0090130 | 155 | 0.011 | |
| positive regulation of transcription from rna polymerase ii promoter | GO:0045944 | 204 | 0.011 | |
| aromatic compound catabolic process | GO:0019439 | 166 | 0.011 | |
| positive regulation of molecular function | GO:0044093 | 136 | 0.011 | |
| regulation of mrna metabolic process | GO:1903311 | 72 | 0.011 | |
| amine metabolic process | GO:0009308 | 12 | 0.011 | |
| chitin based cuticle development | GO:0040003 | 49 | 0.011 | |
| nitrogen compound transport | GO:0071705 | 85 | 0.011 | |
| epithelial cell migration | GO:0010631 | 148 | 0.011 | |
| regulation of cell differentiation | GO:0045595 | 302 | 0.011 | |
| positive regulation of transcription dna templated | GO:0045893 | 266 | 0.011 | |
| negative regulation of nucleic acid templated transcription | GO:1903507 | 240 | 0.011 | |
| regulation of epithelial cell proliferation | GO:0050678 | 4 | 0.011 | |
| positive regulation of cellular component organization | GO:0051130 | 156 | 0.011 | |
| spindle organization | GO:0007051 | 253 | 0.011 | |
| regulation of protein catabolic process | GO:0042176 | 55 | 0.011 | |
| rna localization | GO:0006403 | 115 | 0.011 | |
| ribonucleoside catabolic process | GO:0042454 | 112 | 0.011 | |
| ribonucleoside triphosphate catabolic process | GO:0009203 | 108 | 0.011 | |
| programmed cell death | GO:0012501 | 257 | 0.011 | |
| positive regulation of cellular biosynthetic process | GO:0031328 | 316 | 0.011 | |
| protein ubiquitination | GO:0016567 | 70 | 0.011 | |
| nucleoside phosphate catabolic process | GO:1901292 | 110 | 0.011 | |
| positive regulation of catalytic activity | GO:0043085 | 118 | 0.011 | |
| larval development | GO:0002164 | 104 | 0.010 | |
| response to bacterium | GO:0009617 | 198 | 0.010 | |
| negative regulation of cellular macromolecule biosynthetic process | GO:2000113 | 267 | 0.010 | |
| response to abiotic stimulus | GO:0009628 | 341 | 0.010 | |
| chromatin silencing | GO:0006342 | 76 | 0.010 | |
| regulation of defense response | GO:0031347 | 102 | 0.010 | |
| morphogenesis of an epithelium | GO:0002009 | 276 | 0.010 | |
| spermatogenesis | GO:0007283 | 200 | 0.010 | |
| positive regulation of defense response | GO:0031349 | 59 | 0.010 | |
| negative regulation of signaling | GO:0023057 | 219 | 0.010 | |
| establishment of protein localization | GO:0045184 | 163 | 0.010 | |
| spermatid development | GO:0007286 | 98 | 0.010 | |
| homeostatic process | GO:0042592 | 199 | 0.010 | |