| mrna metabolic process | GO:0016071 | 124 | 0.594 | |
| rna processing | GO:0006396 | 147 | 0.428 | |
| mrna processing | GO:0006397 | 104 | 0.333 | |
| endocytosis | GO:0006897 | 310 | 0.330 | |
| vesicle mediated transport | GO:0016192 | 381 | 0.320 | |
| macromolecular complex assembly | GO:0065003 | 256 | 0.307 | |
| cell migration | GO:0016477 | 238 | 0.299 | |
| mrna splicing via spliceosome | GO:0000398 | 73 | 0.282 | |
| rna splicing via transesterification reactions | GO:0000375 | 73 | 0.244 | |
| ribonucleoprotein complex subunit organization | GO:0071826 | 28 | 0.218 | |
| rna splicing via transesterification reactions with bulged adenosine as nucleophile | GO:0000377 | 73 | 0.206 | |
| regulation of rna splicing | GO:0043484 | 69 | 0.205 | |
| gonad development | GO:0008406 | 50 | 0.204 | |
| mitotic cell cycle phase transition | GO:0044772 | 138 | 0.203 | |
| reproductive system development | GO:0061458 | 74 | 0.196 | |
| meiotic cell cycle | GO:0051321 | 171 | 0.190 | |
| localization of cell | GO:0051674 | 257 | 0.190 | |
| meiotic nuclear division | GO:0007126 | 151 | 0.185 | |
| cellular macromolecule localization | GO:0070727 | 220 | 0.182 | |
| embryo development ending in birth or egg hatching | GO:0009792 | 152 | 0.158 | |
| rna splicing | GO:0008380 | 83 | 0.153 | |
| larval development | GO:0002164 | 104 | 0.153 | |
| ncrna 3 end processing | GO:0043628 | 17 | 0.149 | |
| ribonucleoprotein complex assembly | GO:0022618 | 23 | 0.149 | |
| nuclear division | GO:0000280 | 332 | 0.148 | |
| regulation of mrna splicing via spliceosome | GO:0048024 | 64 | 0.147 | |
| reproductive structure development | GO:0048608 | 74 | 0.137 | |
| organelle fission | GO:0048285 | 340 | 0.128 | |
| snrna metabolic process | GO:0016073 | 14 | 0.123 | |
| cell proliferation | GO:0008283 | 299 | 0.123 | |
| body morphogenesis | GO:0010171 | 2 | 0.119 | |
| regulation of mrna metabolic process | GO:1903311 | 72 | 0.100 | |
| histone modification | GO:0016570 | 106 | 0.094 | |
| snrna processing | GO:0016180 | 14 | 0.092 | |
| intracellular protein transport | GO:0006886 | 104 | 0.091 | |
| regulation of gene expression epigenetic | GO:0040029 | 128 | 0.089 | |
| cellular macromolecular complex assembly | GO:0034622 | 153 | 0.088 | |
| gene silencing | GO:0016458 | 138 | 0.083 | |
| development of primary sexual characteristics | GO:0045137 | 50 | 0.082 | |
| chromosome organization | GO:0051276 | 360 | 0.080 | |
| cell motility | GO:0048870 | 251 | 0.079 | |
| single organism cellular localization | GO:1902580 | 180 | 0.079 | |
| immune system process | GO:0002376 | 347 | 0.074 | |
| spindle organization | GO:0007051 | 253 | 0.073 | |
| regulation of multi organism process | GO:0043900 | 131 | 0.072 | |
| regulation of cell cycle | GO:0051726 | 291 | 0.070 | |
| regulation of mrna processing | GO:0050684 | 71 | 0.066 | |
| regulation of alternative mrna splicing via spliceosome | GO:0000381 | 60 | 0.066 | |
| chromatin organization | GO:0006325 | 207 | 0.064 | |
| regulation of phosphorylation | GO:0042325 | 147 | 0.062 | |
| negative regulation of cellular metabolic process | GO:0031324 | 382 | 0.062 | |
| phagocytosis | GO:0006909 | 215 | 0.061 | |
| positive regulation of macromolecule metabolic process | GO:0010604 | 405 | 0.061 | |
| regulation of cell cycle process | GO:0010564 | 181 | 0.060 | |
| protein import into nucleus | GO:0006606 | 51 | 0.060 | |
| positive regulation of biosynthetic process | GO:0009891 | 316 | 0.059 | |
| signal transduction by phosphorylation | GO:0023014 | 107 | 0.058 | |
| enzyme linked receptor protein signaling pathway | GO:0007167 | 179 | 0.053 | |
| tube development | GO:0035295 | 244 | 0.051 | |
| protein localization | GO:0008104 | 284 | 0.050 | |
| regulation of cell cycle phase transition | GO:1901987 | 130 | 0.048 | |
| protein import | GO:0017038 | 55 | 0.048 | |
| posttranscriptional gene silencing by rna | GO:0035194 | 45 | 0.048 | |
| gene silencing by rna | GO:0031047 | 57 | 0.047 | |
| cell cycle phase transition | GO:0044770 | 140 | 0.047 | |
| protein modification process | GO:0036211 | 438 | 0.044 | |
| genitalia development | GO:0048806 | 26 | 0.043 | |
| dna packaging | GO:0006323 | 91 | 0.043 | |
| protein localization to nucleus | GO:0034504 | 55 | 0.043 | |
| posttranscriptional gene silencing | GO:0016441 | 46 | 0.042 | |
| catabolic process | GO:0009056 | 409 | 0.042 | |
| regulation of molecular function | GO:0065009 | 217 | 0.042 | |
| regulation of cell differentiation | GO:0045595 | 302 | 0.041 | |
| mitotic spindle organization | GO:0007052 | 220 | 0.040 | |
| rna interference | GO:0016246 | 27 | 0.039 | |
| cell division | GO:0051301 | 248 | 0.036 | |
| negative regulation of gene expression | GO:0010629 | 387 | 0.036 | |
| transmembrane receptor protein serine threonine kinase signaling pathway | GO:0007178 | 65 | 0.036 | |
| cytoplasmic transport | GO:0016482 | 130 | 0.036 | |
| organic substance catabolic process | GO:1901575 | 308 | 0.035 | |
| positive regulation of transcription dna templated | GO:0045893 | 266 | 0.034 | |
| intracellular mrna localization | GO:0008298 | 66 | 0.034 | |
| regulation of meiosis | GO:0040020 | 3 | 0.033 | |
| ribonucleoprotein complex biogenesis | GO:0022613 | 31 | 0.033 | |
| cellular amino acid metabolic process | GO:0006520 | 61 | 0.033 | |
| regulation of immune system process | GO:0002682 | 176 | 0.032 | |
| cellular protein localization | GO:0034613 | 160 | 0.032 | |
| regulation of organelle organization | GO:0033043 | 196 | 0.032 | |
| single organism nuclear import | GO:1902593 | 51 | 0.032 | |
| centrosome organization | GO:0051297 | 163 | 0.030 | |
| cellular response to chemical stimulus | GO:0070887 | 199 | 0.030 | |
| molting cycle | GO:0042303 | 56 | 0.029 | |
| protein complex assembly | GO:0006461 | 200 | 0.028 | |
| single organism intracellular transport | GO:1902582 | 207 | 0.028 | |
| negative regulation of mitotic cell cycle phase transition | GO:1901991 | 103 | 0.028 | |
| regulation of cellular component biogenesis | GO:0044087 | 201 | 0.027 | |
| negative regulation of mitotic cell cycle | GO:0045930 | 109 | 0.027 | |
| regulation of multicellular organismal development | GO:2000026 | 414 | 0.027 | |
| ncrna metabolic process | GO:0034660 | 43 | 0.026 | |
| regulation of g1 s transition of mitotic cell cycle | GO:2000045 | 23 | 0.026 | |
| establishment of localization in cell | GO:0051649 | 402 | 0.026 | |
| sex differentiation | GO:0007548 | 81 | 0.026 | |
| carboxylic acid metabolic process | GO:0019752 | 92 | 0.025 | |
| rna catabolic process | GO:0006401 | 37 | 0.025 | |
| epithelial cell differentiation | GO:0030855 | 322 | 0.025 | |
| chromatin modification | GO:0016568 | 147 | 0.024 | |
| cellular protein modification process | GO:0006464 | 438 | 0.024 | |
| ncrna processing | GO:0034470 | 30 | 0.024 | |
| positive regulation of protein metabolic process | GO:0051247 | 128 | 0.024 | |
| small molecule metabolic process | GO:0044281 | 305 | 0.024 | |
| rna localization | GO:0006403 | 115 | 0.024 | |
| establishment of protein localization | GO:0045184 | 163 | 0.024 | |
| organelle assembly | GO:0070925 | 198 | 0.023 | |
| peptidyl lysine methylation | GO:0018022 | 16 | 0.023 | |
| cellular catabolic process | GO:0044248 | 372 | 0.023 | |
| single organism biosynthetic process | GO:0044711 | 206 | 0.023 | |
| nucleobase containing compound catabolic process | GO:0034655 | 165 | 0.022 | |
| peptidyl amino acid modification | GO:0018193 | 105 | 0.021 | |
| response to lipopolysaccharide | GO:0032496 | 4 | 0.021 | |
| single organism catabolic process | GO:0044712 | 228 | 0.021 | |
| peptidyl lysine modification | GO:0018205 | 57 | 0.021 | |
| chromosome segregation | GO:0007059 | 157 | 0.021 | |
| rna 3 end processing | GO:0031123 | 45 | 0.021 | |
| endodermal cell differentiation | GO:0035987 | 3 | 0.021 | |
| posttranscriptional regulation of gene expression | GO:0010608 | 145 | 0.020 | |
| positive regulation of nucleobase containing compound metabolic process | GO:0045935 | 332 | 0.020 | |
| negative regulation of cell cycle phase transition | GO:1901988 | 103 | 0.020 | |
| regulation of cell development | GO:0060284 | 215 | 0.020 | |
| regulation of response to stress | GO:0080134 | 200 | 0.020 | |
| imaginal disc derived appendage development | GO:0048737 | 399 | 0.020 | |
| regulation of meiotic cell cycle | GO:0051445 | 9 | 0.020 | |
| protein targeting to nucleus | GO:0044744 | 51 | 0.020 | |
| stem cell differentiation | GO:0048863 | 117 | 0.020 | |
| heterocycle catabolic process | GO:0046700 | 166 | 0.020 | |
| intracellular transport | GO:0046907 | 228 | 0.020 | |
| cellular amine metabolic process | GO:0044106 | 12 | 0.019 | |
| covalent chromatin modification | GO:0016569 | 106 | 0.019 | |
| mapk cascade | GO:0000165 | 107 | 0.019 | |
| regulation of cellular amino acid metabolic process | GO:0006521 | 0 | 0.019 | |
| cell cycle g1 s phase transition | GO:0044843 | 31 | 0.018 | |
| positive regulation of cellular protein metabolic process | GO:0032270 | 118 | 0.018 | |
| smad protein import into nucleus | GO:0007184 | 11 | 0.018 | |
| organic cyclic compound catabolic process | GO:1901361 | 168 | 0.018 | |
| cellular macromolecule catabolic process | GO:0044265 | 136 | 0.018 | |
| actin filament based process | GO:0030029 | 220 | 0.018 | |
| cardiovascular system development | GO:0072358 | 82 | 0.018 | |
| nucleocytoplasmic transport | GO:0006913 | 72 | 0.018 | |
| organic substance transport | GO:0071702 | 257 | 0.018 | |
| growth | GO:0040007 | 359 | 0.017 | |
| regulation of cellular response to stress | GO:0080135 | 89 | 0.017 | |
| regulation of cellular ketone metabolic process | GO:0010565 | 3 | 0.017 | |
| hematopoietic or lymphoid organ development | GO:0048534 | 57 | 0.017 | |
| regulation of catabolic process | GO:0009894 | 170 | 0.017 | |
| positive regulation of cellular amine metabolic process | GO:0033240 | 0 | 0.017 | |
| ubiquitin dependent protein catabolic process | GO:0006511 | 78 | 0.017 | |
| regulation of cellular protein metabolic process | GO:0032268 | 243 | 0.017 | |
| dna conformation change | GO:0071103 | 105 | 0.017 | |
| protein transport | GO:0015031 | 155 | 0.016 | |
| positive regulation of organelle organization | GO:0010638 | 65 | 0.016 | |
| positive regulation of cellular component organization | GO:0051130 | 156 | 0.016 | |
| single organism behavior | GO:0044708 | 391 | 0.016 | |
| positive regulation of cellular component biogenesis | GO:0044089 | 80 | 0.016 | |
| regulation of cellular catabolic process | GO:0031329 | 157 | 0.016 | |
| biological adhesion | GO:0022610 | 138 | 0.016 | |
| negative regulation of developmental process | GO:0051093 | 201 | 0.016 | |
| response to abiotic stimulus | GO:0009628 | 341 | 0.016 | |
| regulation of localization | GO:0032879 | 275 | 0.016 | |
| regulation of cellular amine metabolic process | GO:0033238 | 3 | 0.015 | |
| regulation of anatomical structure morphogenesis | GO:0022603 | 242 | 0.015 | |
| protein complex biogenesis | GO:0070271 | 201 | 0.015 | |
| small gtpase mediated signal transduction | GO:0007264 | 88 | 0.015 | |
| organic acid metabolic process | GO:0006082 | 103 | 0.015 | |
| cellular component disassembly | GO:0022411 | 46 | 0.015 | |
| cell death | GO:0008219 | 279 | 0.015 | |
| regulation of mitotic cell cycle phase transition | GO:1901990 | 130 | 0.015 | |
| regulation of immune response | GO:0050776 | 118 | 0.015 | |
| regulation of cell proliferation | GO:0042127 | 163 | 0.015 | |
| intracellular signal transduction | GO:0035556 | 300 | 0.014 | |
| negative regulation of rna metabolic process | GO:0051253 | 251 | 0.014 | |
| g1 s transition of mitotic cell cycle | GO:0000082 | 31 | 0.014 | |
| protein targeting | GO:0006605 | 64 | 0.014 | |
| methylation | GO:0032259 | 47 | 0.014 | |
| positive regulation of phosphorus metabolic process | GO:0010562 | 139 | 0.014 | |
| homeostatic process | GO:0042592 | 199 | 0.014 | |
| tube morphogenesis | GO:0035239 | 191 | 0.014 | |
| muscle cell differentiation | GO:0042692 | 103 | 0.014 | |
| positive regulation of response to stimulus | GO:0048584 | 323 | 0.014 | |
| aromatic compound catabolic process | GO:0019439 | 166 | 0.014 | |
| negative regulation of intrinsic apoptotic signaling pathway | GO:2001243 | 1 | 0.013 | |
| dna metabolic process | GO:0006259 | 227 | 0.013 | |
| positive regulation of nucleic acid templated transcription | GO:1903508 | 266 | 0.013 | |
| nuclear transport | GO:0051169 | 72 | 0.013 | |
| positive regulation of cellular biosynthetic process | GO:0031328 | 316 | 0.013 | |
| amine metabolic process | GO:0009308 | 12 | 0.013 | |
| mitotic sister chromatid segregation | GO:0000070 | 87 | 0.013 | |
| cell adhesion | GO:0007155 | 136 | 0.012 | |
| organonitrogen compound metabolic process | GO:1901564 | 318 | 0.012 | |
| alternative mrna splicing via spliceosome | GO:0000380 | 60 | 0.012 | |
| mitotic nuclear division | GO:0007067 | 213 | 0.012 | |
| hemopoiesis | GO:0030097 | 46 | 0.012 | |
| microtubule organizing center organization | GO:0031023 | 168 | 0.012 | |
| negative regulation of cell differentiation | GO:0045596 | 143 | 0.012 | |
| embryonic pattern specification | GO:0009880 | 174 | 0.012 | |
| response to oxygen containing compound | GO:1901700 | 200 | 0.012 | |
| positive regulation of gene expression | GO:0010628 | 290 | 0.012 | |
| response to other organism | GO:0051707 | 293 | 0.011 | |
| phosphorylation | GO:0016310 | 294 | 0.011 | |
| tissue morphogenesis | GO:0048729 | 297 | 0.011 | |
| positive regulation of transport | GO:0051050 | 92 | 0.011 | |
| negative regulation of signal transduction by p53 class mediator | GO:1901797 | 1 | 0.011 | |
| appendage morphogenesis | GO:0035107 | 397 | 0.011 | |
| positive regulation of catalytic activity | GO:0043085 | 118 | 0.011 | |
| defense response | GO:0006952 | 300 | 0.011 | |
| regulation of mapk cascade | GO:0043408 | 92 | 0.011 | |
| protein localization to organelle | GO:0033365 | 82 | 0.011 | |
| nuclear import | GO:0051170 | 51 | 0.011 | |
| establishment of protein localization to organelle | GO:0072594 | 62 | 0.011 | |
| multicellular organismal aging | GO:0010259 | 140 | 0.011 | |
| negative regulation of cell cycle | GO:0045786 | 116 | 0.011 | |
| cellular nitrogen compound catabolic process | GO:0044270 | 165 | 0.011 | |
| snrna 3 end processing | GO:0034472 | 14 | 0.010 | |
| cellular ketone metabolic process | GO:0042180 | 24 | 0.010 | |
| protein alkylation | GO:0008213 | 43 | 0.010 | |
| camera type eye morphogenesis | GO:0048593 | 2 | 0.010 | |
| regulation of transport | GO:0051049 | 181 | 0.010 | |
| response to biotic stimulus | GO:0009607 | 294 | 0.010 | |
| regulation of cell division | GO:0051302 | 72 | 0.010 | |
| establishment or maintenance of cell polarity | GO:0007163 | 167 | 0.010 | |
| regulation of protein modification process | GO:0031399 | 112 | 0.010 | |
| negative regulation of nucleotide metabolic process | GO:0045980 | 4 | 0.010 | |
| immune effector process | GO:0002252 | 98 | 0.010 | |
| nucleus organization | GO:0006997 | 45 | 0.010 | |
