| snrna metabolic process | GO:0016073 | 14 | 0.534 | |
| transcription from rna polymerase ii promoter | GO:0006366 | 368 | 0.405 | |
| regulation of cell cycle | GO:0051726 | 291 | 0.276 | |
| snrna 3 end processing | GO:0034472 | 14 | 0.233 | |
| regulation of gene expression epigenetic | GO:0040029 | 128 | 0.178 | |
| chromatin organization | GO:0006325 | 207 | 0.174 | Fly |
| gene silencing | GO:0016458 | 138 | 0.173 | |
| positive regulation of nitrogen compound metabolic process | GO:0051173 | 354 | 0.141 | |
| response to biotic stimulus | GO:0009607 | 294 | 0.135 | |
| establishment or maintenance of cell polarity | GO:0007163 | 167 | 0.129 | |
| histone h4 acetylation | GO:0043967 | 13 | 0.123 | |
| negative regulation of gene expression | GO:0010629 | 387 | 0.114 | |
| regulation of transcription from rna polymerase ii promoter | GO:0006357 | 378 | 0.114 | |
| internal protein amino acid acetylation | GO:0006475 | 38 | 0.107 | Fly |
| positive regulation of rna biosynthetic process | GO:1902680 | 266 | 0.102 | |
| histone acetylation | GO:0016573 | 38 | 0.101 | Fly |
| defense response to other organism | GO:0098542 | 225 | 0.097 | |
| dendrite morphogenesis | GO:0048813 | 199 | 0.091 | |
| covalent chromatin modification | GO:0016569 | 106 | 0.088 | Fly |
| small molecule metabolic process | GO:0044281 | 305 | 0.087 | |
| cell motility | GO:0048870 | 251 | 0.083 | |
| positive regulation of cell communication | GO:0010647 | 250 | 0.081 | |
| localization of cell | GO:0051674 | 257 | 0.080 | |
| ncrna 3 end processing | GO:0043628 | 17 | 0.079 | |
| negative regulation of biosynthetic process | GO:0009890 | 277 | 0.077 | |
| peptidyl lysine acetylation | GO:0018394 | 39 | 0.076 | Fly |
| muscle structure development | GO:0061061 | 224 | 0.076 | |
| positive regulation of transcription dna templated | GO:0045893 | 266 | 0.075 | |
| negative regulation of cellular metabolic process | GO:0031324 | 382 | 0.072 | |
| protein acylation | GO:0043543 | 42 | 0.069 | Fly |
| posttranscriptional gene silencing | GO:0016441 | 46 | 0.069 | |
| cellular macromolecule localization | GO:0070727 | 220 | 0.067 | |
| dendrite development | GO:0016358 | 204 | 0.067 | |
| cytoplasmic transport | GO:0016482 | 130 | 0.067 | |
| positive regulation of rna metabolic process | GO:0051254 | 271 | 0.066 | |
| autophagy | GO:0006914 | 108 | 0.061 | |
| positive regulation of transcription from rna polymerase ii promoter | GO:0045944 | 204 | 0.060 | |
| rna processing | GO:0006396 | 147 | 0.058 | |
| organic cyclic compound catabolic process | GO:1901361 | 168 | 0.057 | |
| chromatin remodeling | GO:0006338 | 72 | 0.054 | |
| response to other organism | GO:0051707 | 293 | 0.053 | |
| growth | GO:0040007 | 359 | 0.053 | |
| positive regulation of response to stimulus | GO:0048584 | 323 | 0.052 | |
| regulation of autophagy | GO:0010506 | 62 | 0.052 | |
| catabolic process | GO:0009056 | 409 | 0.051 | |
| negative regulation of cellular macromolecule biosynthetic process | GO:2000113 | 267 | 0.050 | |
| snrna processing | GO:0016180 | 14 | 0.049 | |
| gliogenesis | GO:0042063 | 80 | 0.049 | |
| cellular component assembly involved in morphogenesis | GO:0010927 | 151 | 0.049 | |
| establishment of localization in cell | GO:0051649 | 402 | 0.048 | |
| mitotic g2 m transition checkpoint | GO:0044818 | 70 | 0.046 | |
| oocyte axis specification | GO:0007309 | 108 | 0.046 | |
| response to external biotic stimulus | GO:0043207 | 293 | 0.046 | |
| macromolecular complex assembly | GO:0065003 | 256 | 0.046 | |
| negative regulation of mitotic cell cycle | GO:0045930 | 109 | 0.044 | |
| protein modification process | GO:0036211 | 438 | 0.044 | Fly |
| mitotic cell cycle checkpoint | GO:0007093 | 88 | 0.042 | |
| cell migration | GO:0016477 | 238 | 0.041 | |
| negative regulation of transcription dna templated | GO:0045892 | 237 | 0.041 | |
| axon development | GO:0061564 | 297 | 0.041 | |
| posttranscriptional gene silencing by rna | GO:0035194 | 45 | 0.039 | |
| embryonic axis specification | GO:0000578 | 107 | 0.039 | |
| response to abiotic stimulus | GO:0009628 | 341 | 0.037 | |
| negative regulation of macromolecule biosynthetic process | GO:0010558 | 270 | 0.036 | |
| dna integrity checkpoint | GO:0031570 | 81 | 0.036 | |
| taxis | GO:0042330 | 304 | 0.036 | |
| spindle organization | GO:0007051 | 253 | 0.036 | |
| regulation of mitotic cell cycle | GO:0007346 | 190 | 0.035 | |
| meiotic nuclear division | GO:0007126 | 151 | 0.035 | |
| axonogenesis | GO:0007409 | 290 | 0.034 | |
| cellular response to extracellular stimulus | GO:0031668 | 64 | 0.033 | |
| cellular ion homeostasis | GO:0006873 | 39 | 0.033 | |
| protein complex assembly | GO:0006461 | 200 | 0.033 | |
| embryo development ending in birth or egg hatching | GO:0009792 | 152 | 0.033 | |
| carboxylic acid metabolic process | GO:0019752 | 92 | 0.032 | |
| cellular protein localization | GO:0034613 | 160 | 0.032 | |
| positive regulation of signal transduction | GO:0009967 | 223 | 0.031 | |
| cellular response to chemical stimulus | GO:0070887 | 199 | 0.031 | |
| regionalization | GO:0003002 | 416 | 0.031 | |
| negative regulation of cell cycle | GO:0045786 | 116 | 0.030 | |
| mrna processing | GO:0006397 | 104 | 0.030 | |
| anterior posterior axis specification embryo | GO:0008595 | 103 | 0.030 | |
| positive regulation of mapk cascade | GO:0043410 | 63 | 0.030 | |
| protein localization to organelle | GO:0033365 | 82 | 0.029 | |
| meiotic cell cycle | GO:0051321 | 171 | 0.029 | |
| cell division | GO:0051301 | 248 | 0.029 | |
| gene silencing by rna | GO:0031047 | 57 | 0.029 | |
| striated muscle cell differentiation | GO:0051146 | 90 | 0.028 | |
| regulation of cell cycle process | GO:0010564 | 181 | 0.028 | |
| cellular nitrogen compound catabolic process | GO:0044270 | 165 | 0.028 | |
| mitotic dna integrity checkpoint | GO:0044774 | 75 | 0.028 | |
| organelle assembly | GO:0070925 | 198 | 0.027 | |
| cellular catabolic process | GO:0044248 | 372 | 0.027 | |
| negative regulation of rna metabolic process | GO:0051253 | 251 | 0.027 | |
| open tracheal system development | GO:0007424 | 204 | 0.027 | |
| cellular ketone metabolic process | GO:0042180 | 24 | 0.027 | |
| positive regulation of phosphate metabolic process | GO:0045937 | 139 | 0.027 | |
| rna splicing via transesterification reactions | GO:0000375 | 73 | 0.027 | |
| organelle fission | GO:0048285 | 340 | 0.027 | |
| blastoderm segmentation | GO:0007350 | 159 | 0.027 | |
| regulation of response to external stimulus | GO:0032101 | 115 | 0.026 | |
| protein acetylation | GO:0006473 | 39 | 0.026 | Fly |
| negative regulation of nucleic acid templated transcription | GO:1903507 | 240 | 0.026 | |
| positive regulation of biosynthetic process | GO:0009891 | 316 | 0.026 | |
| internal peptidyl lysine acetylation | GO:0018393 | 38 | 0.026 | Fly |
| developmental growth | GO:0048589 | 280 | 0.026 | |
| embryonic pattern specification | GO:0009880 | 174 | 0.026 | |
| developmental maturation | GO:0021700 | 172 | 0.025 | |
| negative regulation of rna biosynthetic process | GO:1902679 | 240 | 0.025 | |
| positive regulation of signaling | GO:0023056 | 243 | 0.025 | |
| wnt signaling pathway | GO:0016055 | 98 | 0.025 | |
| aromatic compound catabolic process | GO:0019439 | 166 | 0.025 | |
| rna 3 end processing | GO:0031123 | 45 | 0.025 | |
| single organism cellular localization | GO:1902580 | 180 | 0.025 | |
| purine containing compound catabolic process | GO:0072523 | 112 | 0.025 | |
| regulation of phosphorylation | GO:0042325 | 147 | 0.025 | |
| positive regulation of cellular amino acid metabolic process | GO:0045764 | 0 | 0.025 | |
| chromatin modification | GO:0016568 | 147 | 0.025 | Fly |
| homeostatic process | GO:0042592 | 199 | 0.024 | |
| positive regulation of macromolecule metabolic process | GO:0010604 | 405 | 0.024 | |
| regulation of cellular ketone metabolic process | GO:0010565 | 3 | 0.024 | |
| protein phosphorylation | GO:0006468 | 169 | 0.024 | |
| purine containing compound metabolic process | GO:0072521 | 155 | 0.024 | |
| phosphorylation | GO:0016310 | 294 | 0.024 | |
| body morphogenesis | GO:0010171 | 2 | 0.023 | |
| regulation of response to stress | GO:0080134 | 200 | 0.023 | |
| neuron projection guidance | GO:0097485 | 241 | 0.023 | |
| ameboidal type cell migration | GO:0001667 | 151 | 0.023 | |
| regulation of cellular amine metabolic process | GO:0033238 | 3 | 0.023 | |
| organonitrogen compound catabolic process | GO:1901565 | 128 | 0.023 | |
| carbohydrate derivative metabolic process | GO:1901135 | 217 | 0.023 | |
| regulation of molecular function | GO:0065009 | 217 | 0.023 | |
| mitotic dna damage checkpoint | GO:0044773 | 74 | 0.022 | |
| reproductive system development | GO:0061458 | 74 | 0.022 | |
| anterior posterior pattern specification | GO:0009952 | 136 | 0.022 | |
| cytokinesis | GO:0000910 | 90 | 0.022 | |
| divalent inorganic cation homeostasis | GO:0072507 | 29 | 0.021 | |
| eye morphogenesis | GO:0048592 | 260 | 0.021 | |
| cellular macromolecular complex assembly | GO:0034622 | 153 | 0.021 | |
| regulation of protein metabolic process | GO:0051246 | 256 | 0.021 | |
| positive regulation of nucleobase containing compound metabolic process | GO:0045935 | 332 | 0.021 | |
| rna splicing via transesterification reactions with bulged adenosine as nucleophile | GO:0000377 | 73 | 0.021 | |
| dorsal ventral pattern formation | GO:0009953 | 133 | 0.020 | |
| intracellular transport | GO:0046907 | 228 | 0.020 | |
| protein localization | GO:0008104 | 284 | 0.020 | |
| cellular chemical homeostasis | GO:0055082 | 40 | 0.020 | |
| protein complex biogenesis | GO:0070271 | 201 | 0.019 | |
| regulation of g1 s transition of mitotic cell cycle | GO:2000045 | 23 | 0.019 | |
| tripartite regional subdivision | GO:0007351 | 103 | 0.019 | |
| defense response | GO:0006952 | 300 | 0.019 | |
| terminal button organization | GO:0072553 | 19 | 0.019 | |
| heterocycle catabolic process | GO:0046700 | 166 | 0.019 | |
| chemotaxis | GO:0006935 | 249 | 0.019 | |
| oxoacid metabolic process | GO:0043436 | 103 | 0.019 | |
| neurological system process | GO:0050877 | 358 | 0.019 | |
| chromatin assembly or disassembly | GO:0006333 | 52 | 0.018 | |
| secondary metabolic process | GO:0019748 | 75 | 0.018 | |
| cellular amine metabolic process | GO:0044106 | 12 | 0.018 | |
| photoreceptor cell differentiation | GO:0046530 | 170 | 0.018 | |
| positive regulation of phosphorylation | GO:0042327 | 87 | 0.018 | |
| cellular response to starvation | GO:0009267 | 61 | 0.018 | |
| regulation of mrna splicing via spliceosome | GO:0048024 | 64 | 0.018 | |
| respiratory system development | GO:0060541 | 213 | 0.018 | |
| histone modification | GO:0016570 | 106 | 0.018 | Fly |
| macromolecule catabolic process | GO:0009057 | 161 | 0.018 | |
| positive regulation of developmental process | GO:0051094 | 143 | 0.018 | |
| regulation of mapk cascade | GO:0043408 | 92 | 0.018 | |
| protein ubiquitination | GO:0016567 | 70 | 0.018 | |
| gene silencing by mirna | GO:0035195 | 22 | 0.018 | |
| organophosphate metabolic process | GO:0019637 | 195 | 0.018 | |
| ncrna processing | GO:0034470 | 30 | 0.018 | |
| carbohydrate derivative catabolic process | GO:1901136 | 118 | 0.017 | |
| regulation of meiosis | GO:0040020 | 3 | 0.017 | |
| nucleobase containing compound catabolic process | GO:0034655 | 165 | 0.017 | |
| mrna metabolic process | GO:0016071 | 124 | 0.017 | |
| cell cycle checkpoint | GO:0000075 | 95 | 0.017 | |
| muscle organ development | GO:0007517 | 127 | 0.017 | |
| cell death | GO:0008219 | 279 | 0.017 | |
| cellular protein modification process | GO:0006464 | 438 | 0.017 | Fly |
| digestive system development | GO:0055123 | 149 | 0.017 | |
| organonitrogen compound metabolic process | GO:1901564 | 318 | 0.017 | |
| regulation of cysteine type endopeptidase activity involved in apoptotic process | GO:0043281 | 25 | 0.017 | |
| maintenance of location | GO:0051235 | 73 | 0.017 | |
| single organism behavior | GO:0044708 | 391 | 0.017 | |
| positive regulation of erk1 and erk2 cascade | GO:0070374 | 36 | 0.017 | |
| amine metabolic process | GO:0009308 | 12 | 0.017 | |
| cell fate specification | GO:0001708 | 71 | 0.017 | |
| tube development | GO:0035295 | 244 | 0.017 | |
| regulation of terminal button organization | GO:2000331 | 11 | 0.017 | |
| gland development | GO:0048732 | 191 | 0.017 | |
| negative regulation of cellular biosynthetic process | GO:0031327 | 277 | 0.016 | |
| regulation of cellular amino acid metabolic process | GO:0006521 | 0 | 0.016 | |
| positive regulation of nucleic acid templated transcription | GO:1903508 | 266 | 0.016 | |
| nitrogen compound transport | GO:0071705 | 85 | 0.016 | |
| death | GO:0016265 | 284 | 0.016 | |
| regulation of gene silencing | GO:0060968 | 63 | 0.016 | |
| protein dna complex assembly | GO:0065004 | 63 | 0.016 | |
| cytoplasm organization | GO:0007028 | 64 | 0.016 | |
| positive regulation of histone deacetylation | GO:0031065 | 2 | 0.016 | |
| axis specification | GO:0009798 | 167 | 0.016 | |
| single organism intracellular transport | GO:1902582 | 207 | 0.016 | |
| protein dna complex subunit organization | GO:0071824 | 86 | 0.016 | |
| endocytosis | GO:0006897 | 310 | 0.016 | |
| ncrna metabolic process | GO:0034660 | 43 | 0.016 | |
| regulation of wnt signaling pathway | GO:0030111 | 68 | 0.016 | |
| eye development | GO:0001654 | 323 | 0.015 | |
| response to pain | GO:0048265 | 3 | 0.015 | |
| nuclear division | GO:0000280 | 332 | 0.015 | |
| g2 dna damage checkpoint | GO:0031572 | 69 | 0.015 | |
| dna metabolic process | GO:0006259 | 227 | 0.015 | |
| cell proliferation | GO:0008283 | 299 | 0.015 | |
| regulation of hemocyte proliferation | GO:0035206 | 37 | 0.015 | |
| defense response to bacterium | GO:0042742 | 178 | 0.015 | |
| locomotory behavior | GO:0007626 | 176 | 0.015 | |
| ion transmembrane transport | GO:0034220 | 122 | 0.015 | |
| regulation of cell proliferation | GO:0042127 | 163 | 0.015 | |
| cellular homeostasis | GO:0019725 | 80 | 0.014 | |
| regulation of cellular protein metabolic process | GO:0032268 | 243 | 0.014 | |
| positive regulation of cellular amine metabolic process | GO:0033240 | 0 | 0.014 | |
| cellular macromolecule catabolic process | GO:0044265 | 136 | 0.014 | |
| ribonucleoprotein complex assembly | GO:0022618 | 23 | 0.014 | |
| organic acid metabolic process | GO:0006082 | 103 | 0.014 | |
| aging | GO:0007568 | 143 | 0.014 | |
| positive regulation of defense response | GO:0031349 | 59 | 0.014 | |
| single organism catabolic process | GO:0044712 | 228 | 0.014 | |
| regulation of rna splicing | GO:0043484 | 69 | 0.014 | |
| columnar cuboidal epithelial cell differentiation | GO:0002065 | 256 | 0.014 | |
| cell cycle arrest | GO:0007050 | 4 | 0.014 | |
| immune response | GO:0006955 | 246 | 0.013 | |
| ion homeostasis | GO:0050801 | 55 | 0.013 | |
| regulation of mrna processing | GO:0050684 | 71 | 0.013 | |
| negative regulation of mitotic cell cycle phase transition | GO:1901991 | 103 | 0.013 | |
| purine nucleotide metabolic process | GO:0006163 | 146 | 0.013 | |
| regulation of protein acetylation | GO:1901983 | 7 | 0.013 | |
| nucleoside metabolic process | GO:0009116 | 127 | 0.013 | |
| negative regulation of cell cycle process | GO:0010948 | 109 | 0.013 | |
| establishment of protein localization | GO:0045184 | 163 | 0.013 | |
| intracellular signal transduction | GO:0035556 | 300 | 0.013 | |
| immune effector process | GO:0002252 | 98 | 0.013 | |
| intracellular protein transport | GO:0006886 | 104 | 0.013 | |
| determination of adult lifespan | GO:0008340 | 137 | 0.013 | |
| ribonucleoside metabolic process | GO:0009119 | 127 | 0.012 | |
| negative regulation of signaling | GO:0023057 | 219 | 0.012 | |
| positive regulation of phosphorus metabolic process | GO:0010562 | 139 | 0.012 | |
| chromosome condensation | GO:0030261 | 41 | 0.012 | |
| protein transport | GO:0015031 | 155 | 0.012 | |
| response to nutrient levels | GO:0031667 | 114 | 0.012 | |
| purine nucleoside catabolic process | GO:0006152 | 112 | 0.012 | |
| protein modification by small protein conjugation or removal | GO:0070647 | 106 | 0.012 | |
| cellular cation homeostasis | GO:0030003 | 38 | 0.012 | |
| cellular metal ion homeostasis | GO:0006875 | 31 | 0.012 | |
| organic substance transport | GO:0071702 | 257 | 0.012 | |
| mitotic g2 dna damage checkpoint | GO:0007095 | 69 | 0.012 | |
| ribonucleotide metabolic process | GO:0009259 | 145 | 0.012 | |
| protein targeting to nucleus | GO:0044744 | 51 | 0.012 | |
| chemosensory behavior | GO:0007635 | 106 | 0.012 | |
| nucleoside catabolic process | GO:0009164 | 112 | 0.012 | |
| cellular response to dna damage stimulus | GO:0006974 | 223 | 0.012 | |
| protein localization to chromatin | GO:0071168 | 3 | 0.012 | |
| cellular amino acid metabolic process | GO:0006520 | 61 | 0.012 | |
| regulation of proteolysis | GO:0030162 | 87 | 0.012 | |
| mrna splicing via spliceosome | GO:0000398 | 73 | 0.012 | |
| positive regulation of histone acetylation | GO:0035066 | 3 | 0.011 | |
| spinal cord development | GO:0021510 | 1 | 0.011 | |
| positive regulation of catabolic process | GO:0009896 | 105 | 0.011 | |
| erk1 and erk2 cascade | GO:0070371 | 39 | 0.011 | |
| positive regulation of intracellular signal transduction | GO:1902533 | 116 | 0.011 | |
| embryonic morphogenesis | GO:0048598 | 206 | 0.011 | |
| dna damage checkpoint | GO:0000077 | 78 | 0.011 | |
| glycosyl compound metabolic process | GO:1901657 | 127 | 0.011 | |
| negative regulation of nucleobase containing compound metabolic process | GO:0045934 | 261 | 0.011 | |
| mapk cascade | GO:0000165 | 107 | 0.011 | |
| cell cycle phase transition | GO:0044770 | 140 | 0.011 | |
| steroid catabolic process | GO:0006706 | 1 | 0.011 | |
| rna splicing | GO:0008380 | 83 | 0.011 | |
| hemocyte differentiation | GO:0042386 | 38 | 0.011 | |
| regulation of erk1 and erk2 cascade | GO:0070372 | 39 | 0.011 | |
| regulation of tube size | GO:0035150 | 46 | 0.011 | |
| axon guidance | GO:0007411 | 233 | 0.011 | |
| regulation of phosphate metabolic process | GO:0019220 | 210 | 0.011 | |
| regulation of blood circulation | GO:1903522 | 21 | 0.011 | |
| response to endogenous stimulus | GO:0009719 | 119 | 0.011 | |
| nucleocytoplasmic transport | GO:0006913 | 72 | 0.010 | |
| small gtpase mediated signal transduction | GO:0007264 | 88 | 0.010 | |
| cytoskeleton dependent cytokinesis | GO:0061640 | 81 | 0.010 | |
| nucleotide metabolic process | GO:0009117 | 161 | 0.010 | |
| alternative mrna splicing via spliceosome | GO:0000380 | 60 | 0.010 | |
| regulation of protein deacetylation | GO:0090311 | 2 | 0.010 | |
| neuroblast proliferation | GO:0007405 | 74 | 0.010 | |
| ribose phosphate metabolic process | GO:0019693 | 145 | 0.010 | |
| response to wounding | GO:0009611 | 94 | 0.010 | |
| regulation of alternative mrna splicing via spliceosome | GO:0000381 | 60 | 0.010 | |
| regulation of neuron differentiation | GO:0045664 | 103 | 0.010 | |
| regulation of catalytic activity | GO:0050790 | 185 | 0.010 | |