| mrna metabolic process | GO:0016071 | 124 | 0.272 | Yeast |
| regulation of transcription from rna polymerase ii promoter | GO:0006357 | 378 | 0.203 | |
| negative regulation of gene expression | GO:0010629 | 387 | 0.184 | |
| mitotic spindle organization | GO:0007052 | 220 | 0.167 | |
| negative regulation of rna metabolic process | GO:0051253 | 251 | 0.140 | |
| aromatic compound catabolic process | GO:0019439 | 166 | 0.132 | |
| nucleobase containing compound catabolic process | GO:0034655 | 165 | 0.128 | |
| transcription from rna polymerase ii promoter | GO:0006366 | 368 | 0.119 | |
| aging | GO:0007568 | 143 | 0.118 | |
| cellular macromolecular complex assembly | GO:0034622 | 153 | 0.117 | |
| negative regulation of cellular metabolic process | GO:0031324 | 382 | 0.115 | |
| catabolic process | GO:0009056 | 409 | 0.100 | |
| small molecule metabolic process | GO:0044281 | 305 | 0.092 | |
| response to organic cyclic compound | GO:0014070 | 89 | 0.091 | |
| protein modification process | GO:0036211 | 438 | 0.090 | |
| cellular protein modification process | GO:0006464 | 438 | 0.090 | |
| mrna splicing via spliceosome | GO:0000398 | 73 | 0.082 | Yeast |
| negative regulation of cellular macromolecule biosynthetic process | GO:2000113 | 267 | 0.081 | |
| negative regulation of rna biosynthetic process | GO:1902679 | 240 | 0.078 | |
| chromosome organization | GO:0051276 | 360 | 0.077 | |
| negative regulation of transcription dna templated | GO:0045892 | 237 | 0.073 | |
| cell division | GO:0051301 | 248 | 0.071 | |
| determination of adult lifespan | GO:0008340 | 137 | 0.070 | |
| organic cyclic compound catabolic process | GO:1901361 | 168 | 0.064 | |
| nucleotide metabolic process | GO:0009117 | 161 | 0.063 | |
| programmed cell death | GO:0012501 | 257 | 0.059 | |
| negative regulation of biosynthetic process | GO:0009890 | 277 | 0.057 | |
| nucleobase containing small molecule metabolic process | GO:0055086 | 174 | 0.057 | |
| response to nitrogen compound | GO:1901698 | 90 | 0.056 | |
| cellular nitrogen compound catabolic process | GO:0044270 | 165 | 0.055 | |
| cellular catabolic process | GO:0044248 | 372 | 0.054 | |
| purine containing compound catabolic process | GO:0072523 | 112 | 0.052 | |
| heterocycle catabolic process | GO:0046700 | 166 | 0.052 | |
| rna splicing | GO:0008380 | 83 | 0.051 | Yeast |
| mrna processing | GO:0006397 | 104 | 0.051 | Yeast |
| regulation of growth | GO:0040008 | 233 | 0.051 | |
| regulation of protein modification process | GO:0031399 | 112 | 0.049 | |
| organic substance catabolic process | GO:1901575 | 308 | 0.048 | |
| regulation of cell cycle process | GO:0010564 | 181 | 0.047 | |
| nucleoside phosphate metabolic process | GO:0006753 | 162 | 0.047 | |
| positive regulation of biosynthetic process | GO:0009891 | 316 | 0.045 | |
| single organism behavior | GO:0044708 | 391 | 0.043 | |
| chromatin organization | GO:0006325 | 207 | 0.043 | |
| regulation of cell cycle | GO:0051726 | 291 | 0.042 | |
| rna localization | GO:0006403 | 115 | 0.041 | |
| regulation of cell cycle phase transition | GO:1901987 | 130 | 0.041 | |
| macromolecular complex assembly | GO:0065003 | 256 | 0.040 | |
| negative regulation of cellular biosynthetic process | GO:0031327 | 277 | 0.039 | |
| negative regulation of nucleobase containing compound metabolic process | GO:0045934 | 261 | 0.039 | |
| nuclear division | GO:0000280 | 332 | 0.038 | |
| regulation of cellular protein metabolic process | GO:0032268 | 243 | 0.038 | |
| cell migration | GO:0016477 | 238 | 0.036 | |
| cell death | GO:0008219 | 279 | 0.035 | |
| regulation of dna templated transcription elongation | GO:0032784 | 17 | 0.035 | |
| negative regulation of nitrogen compound metabolic process | GO:0051172 | 265 | 0.034 | |
| spindle organization | GO:0007051 | 253 | 0.033 | |
| organophosphate metabolic process | GO:0019637 | 195 | 0.033 | |
| growth | GO:0040007 | 359 | 0.033 | |
| positive regulation of gene expression | GO:0010628 | 290 | 0.033 | |
| positive regulation of multicellular organismal process | GO:0051240 | 143 | 0.032 | |
| negative regulation of signal transduction | GO:0009968 | 206 | 0.032 | |
| negative regulation of developmental process | GO:0051093 | 201 | 0.032 | |
| response to biotic stimulus | GO:0009607 | 294 | 0.031 | |
| single organism catabolic process | GO:0044712 | 228 | 0.031 | |
| defense response | GO:0006952 | 300 | 0.031 | |
| response to starvation | GO:0042594 | 97 | 0.030 | |
| response to organonitrogen compound | GO:0010243 | 75 | 0.030 | |
| organonitrogen compound metabolic process | GO:1901564 | 318 | 0.030 | |
| positive regulation of response to stimulus | GO:0048584 | 323 | 0.029 | |
| purine containing compound metabolic process | GO:0072521 | 155 | 0.029 | |
| rna processing | GO:0006396 | 147 | 0.028 | Yeast |
| apoptotic process | GO:0006915 | 159 | 0.027 | |
| death | GO:0016265 | 284 | 0.027 | |
| negative regulation of macromolecule biosynthetic process | GO:0010558 | 270 | 0.026 | |
| positive regulation of cellular biosynthetic process | GO:0031328 | 316 | 0.026 | |
| regulation of alternative mrna splicing via spliceosome | GO:0000381 | 60 | 0.026 | |
| intracellular signal transduction | GO:0035556 | 300 | 0.025 | |
| protein complex assembly | GO:0006461 | 200 | 0.025 | |
| positive regulation of rna metabolic process | GO:0051254 | 271 | 0.024 | |
| localization of cell | GO:0051674 | 257 | 0.024 | |
| purine ribonucleotide catabolic process | GO:0009154 | 109 | 0.023 | |
| mrna catabolic process | GO:0006402 | 33 | 0.023 | |
| rna splicing via transesterification reactions with bulged adenosine as nucleophile | GO:0000377 | 73 | 0.023 | Yeast |
| positive regulation of macromolecule metabolic process | GO:0010604 | 405 | 0.022 | |
| multicellular organismal aging | GO:0010259 | 140 | 0.022 | |
| dna templated transcriptional preinitiation complex assembly | GO:0070897 | 20 | 0.022 | |
| regulation of catalytic activity | GO:0050790 | 185 | 0.022 | |
| positive regulation of multi organism process | GO:0043902 | 40 | 0.022 | |
| cell motility | GO:0048870 | 251 | 0.022 | |
| response to oxygen containing compound | GO:1901700 | 200 | 0.021 | |
| regulation of meiosis | GO:0040020 | 3 | 0.021 | |
| response to organic substance | GO:0010033 | 284 | 0.021 | |
| macromolecule catabolic process | GO:0009057 | 161 | 0.021 | |
| regulation of phosphate metabolic process | GO:0019220 | 210 | 0.021 | |
| immune system process | GO:0002376 | 347 | 0.020 | |
| regulation of multicellular organismal development | GO:2000026 | 414 | 0.020 | |
| regulation of phosphorylation | GO:0042325 | 147 | 0.020 | |
| positive regulation of signal transduction | GO:0009967 | 223 | 0.020 | |
| ribonucleotide metabolic process | GO:0009259 | 145 | 0.019 | |
| negative regulation of gene expression epigenetic | GO:0045814 | 77 | 0.019 | |
| regulation of mitotic cell cycle phase transition | GO:1901990 | 130 | 0.019 | |
| phosphorylation | GO:0016310 | 294 | 0.019 | |
| regulation of cell differentiation | GO:0045595 | 302 | 0.019 | |
| regulation of mitotic cell cycle | GO:0007346 | 190 | 0.018 | |
| chromatin modification | GO:0016568 | 147 | 0.018 | |
| positive regulation of transcription from rna polymerase ii promoter | GO:0045944 | 204 | 0.018 | |
| regulation of transcription elongation from rna polymerase ii promoter | GO:0034243 | 15 | 0.018 | |
| establishment of oocyte nucleus localization involved in oocyte dorsal ventral axis specification | GO:0030722 | 6 | 0.018 | |
| regulation of catabolic process | GO:0009894 | 170 | 0.018 | |
| oxoacid metabolic process | GO:0043436 | 103 | 0.018 | |
| purine nucleotide catabolic process | GO:0006195 | 109 | 0.018 | |
| positive regulation of cell communication | GO:0010647 | 250 | 0.018 | |
| regulation of molecular function | GO:0065009 | 217 | 0.017 | |
| embryonic morphogenesis | GO:0048598 | 206 | 0.017 | |
| actin cytoskeleton organization | GO:0030036 | 206 | 0.017 | |
| response to abiotic stimulus | GO:0009628 | 341 | 0.017 | |
| regulation of nuclear division | GO:0051783 | 58 | 0.017 | |
| response to bacterium | GO:0009617 | 198 | 0.017 | |
| regulation of protein metabolic process | GO:0051246 | 256 | 0.017 | |
| negative regulation of response to stimulus | GO:0048585 | 258 | 0.017 | |
| actin filament organization | GO:0007015 | 126 | 0.017 | |
| positive regulation of cellular protein metabolic process | GO:0032270 | 118 | 0.016 | |
| purine nucleotide metabolic process | GO:0006163 | 146 | 0.016 | |
| regulation of cellular component biogenesis | GO:0044087 | 201 | 0.016 | |
| developmental growth | GO:0048589 | 280 | 0.016 | |
| regulation of cellular catabolic process | GO:0031329 | 157 | 0.016 | |
| dna templated transcription elongation | GO:0006354 | 18 | 0.016 | |
| spliceosomal snrnp assembly | GO:0000387 | 2 | 0.016 | |
| ras protein signal transduction | GO:0007265 | 88 | 0.016 | |
| purine ribonucleotide metabolic process | GO:0009150 | 145 | 0.016 | |
| regulation of gene expression epigenetic | GO:0040029 | 128 | 0.016 | |
| positive regulation of growth | GO:0045927 | 75 | 0.015 | |
| establishment of rna localization | GO:0051236 | 47 | 0.015 | |
| regulation of cell division | GO:0051302 | 72 | 0.015 | |
| centrosome organization | GO:0051297 | 163 | 0.015 | |
| regulation of developmental growth | GO:0048638 | 174 | 0.015 | |
| nitrogen compound transport | GO:0071705 | 85 | 0.015 | |
| positive regulation of nitrogen compound metabolic process | GO:0051173 | 354 | 0.015 | |
| negative regulation of intrinsic apoptotic signaling pathway | GO:2001243 | 1 | 0.015 | |
| homeostatic process | GO:0042592 | 199 | 0.015 | |
| organonitrogen compound catabolic process | GO:1901565 | 128 | 0.014 | |
| purine ribonucleoside metabolic process | GO:0046128 | 127 | 0.014 | |
| locomotory behavior | GO:0007626 | 176 | 0.014 | |
| rna catabolic process | GO:0006401 | 37 | 0.014 | |
| carboxylic acid metabolic process | GO:0019752 | 92 | 0.014 | |
| regulation of intracellular signal transduction | GO:1902531 | 236 | 0.014 | |
| cellular response to chemical stimulus | GO:0070887 | 199 | 0.014 | |
| protein dna complex subunit organization | GO:0071824 | 86 | 0.014 | |
| regulation of apoptotic process | GO:0042981 | 130 | 0.014 | |
| rna splicing via transesterification reactions | GO:0000375 | 73 | 0.014 | Yeast |
| nucleoside phosphate catabolic process | GO:1901292 | 110 | 0.014 | |
| regulation of programmed cell death | GO:0043067 | 152 | 0.014 | |
| regulation of organelle organization | GO:0033043 | 196 | 0.014 | |
| mitotic cell cycle phase transition | GO:0044772 | 138 | 0.013 | |
| regulation of mrna splicing via spliceosome | GO:0048024 | 64 | 0.013 | |
| ribonucleotide catabolic process | GO:0009261 | 109 | 0.013 | |
| tissue morphogenesis | GO:0048729 | 297 | 0.013 | |
| cellular response to dna damage stimulus | GO:0006974 | 223 | 0.013 | |
| enzyme linked receptor protein signaling pathway | GO:0007167 | 179 | 0.013 | |
| positive regulation of nucleic acid templated transcription | GO:1903508 | 266 | 0.013 | |
| ribonucleoside catabolic process | GO:0042454 | 112 | 0.013 | |
| small gtpase mediated signal transduction | GO:0007264 | 88 | 0.013 | |
| organic substance transport | GO:0071702 | 257 | 0.013 | |
| actin filament based process | GO:0030029 | 220 | 0.013 | |
| covalent chromatin modification | GO:0016569 | 106 | 0.013 | |
| negative regulation of cell cycle process | GO:0010948 | 109 | 0.013 | |
| positive regulation of protein modification process | GO:0031401 | 58 | 0.013 | |
| transcription elongation from rna polymerase ii promoter | GO:0006368 | 18 | 0.012 | |
| protein dna complex assembly | GO:0065004 | 63 | 0.012 | |
| chromatin silencing | GO:0006342 | 76 | 0.012 | |
| peptidyl lysine modification | GO:0018205 | 57 | 0.012 | |
| lipid metabolic process | GO:0006629 | 121 | 0.012 | |
| adult behavior | GO:0030534 | 137 | 0.012 | |
| positive regulation of protein metabolic process | GO:0051247 | 128 | 0.012 | |
| regulation of cell proliferation | GO:0042127 | 163 | 0.012 | |
| mrna transport | GO:0051028 | 15 | 0.012 | |
| meiotic cell cycle | GO:0051321 | 171 | 0.012 | |
| carbohydrate derivative metabolic process | GO:1901135 | 217 | 0.012 | |
| response to peptide | GO:1901652 | 29 | 0.012 | |
| response to wounding | GO:0009611 | 94 | 0.012 | |
| cellular response to organic substance | GO:0071310 | 132 | 0.012 | |
| response to other organism | GO:0051707 | 293 | 0.012 | |
| amine metabolic process | GO:0009308 | 12 | 0.012 | |
| negative regulation of cell differentiation | GO:0045596 | 143 | 0.012 | |
| response to extracellular stimulus | GO:0009991 | 116 | 0.012 | |
| response to endogenous stimulus | GO:0009719 | 119 | 0.011 | |
| positive regulation of rna biosynthetic process | GO:1902680 | 266 | 0.011 | |
| body morphogenesis | GO:0010171 | 2 | 0.011 | |
| regulation of response to stress | GO:0080134 | 200 | 0.011 | |
| establishment of localization in cell | GO:0051649 | 402 | 0.011 | |
| response to external biotic stimulus | GO:0043207 | 293 | 0.011 | |
| positive regulation of signaling | GO:0023056 | 243 | 0.011 | |
| neurological system process | GO:0050877 | 358 | 0.011 | |
| mitotic nuclear division | GO:0007067 | 213 | 0.011 | |
| regulation of multi organism process | GO:0043900 | 131 | 0.011 | |
| positive regulation of macromolecule biosynthetic process | GO:0010557 | 283 | 0.011 | |
| regulation of ras protein signal transduction | GO:0046578 | 93 | 0.011 | |
| regulation of hydrolase activity | GO:0051336 | 97 | 0.011 | |
| hatching | GO:0035188 | 4 | 0.011 | |
| organic acid metabolic process | GO:0006082 | 103 | 0.011 | |
| alternative mrna splicing via spliceosome | GO:0000380 | 60 | 0.010 | |
| embryo development ending in birth or egg hatching | GO:0009792 | 152 | 0.010 | |
