| histone modification | GO:0016570 | 106 | 0.817 | |
| chromatin organization | GO:0006325 | 207 | 0.760 | |
| covalent chromatin modification | GO:0016569 | 106 | 0.584 | |
| positive regulation of transcription dna templated | GO:0045893 | 266 | 0.564 | |
| negative regulation of transcription dna templated | GO:0045892 | 237 | 0.552 | |
| positive regulation of rna metabolic process | GO:0051254 | 271 | 0.464 | |
| dna metabolic process | GO:0006259 | 227 | 0.419 | |
| positive regulation of gene expression | GO:0010628 | 290 | 0.380 | |
| positive regulation of rna biosynthetic process | GO:1902680 | 266 | 0.338 | |
| protein modification process | GO:0036211 | 438 | 0.256 | |
| positive regulation of nucleic acid templated transcription | GO:1903508 | 266 | 0.247 | |
| positive regulation of biosynthetic process | GO:0009891 | 316 | 0.244 | |
| positive regulation of macromolecule biosynthetic process | GO:0010557 | 283 | 0.242 | |
| negative regulation of nucleic acid templated transcription | GO:1903507 | 240 | 0.234 | |
| positive regulation of nitrogen compound metabolic process | GO:0051173 | 354 | 0.200 | |
| cellular protein modification process | GO:0006464 | 438 | 0.200 | |
| chromatin modification | GO:0016568 | 147 | 0.189 | |
| transcription from rna polymerase ii promoter | GO:0006366 | 368 | 0.186 | |
| positive regulation of nucleobase containing compound metabolic process | GO:0045935 | 332 | 0.172 | |
| positive regulation of cellular biosynthetic process | GO:0031328 | 316 | 0.166 | |
| positive regulation of macromolecule metabolic process | GO:0010604 | 405 | 0.154 | |
| negative regulation of nitrogen compound metabolic process | GO:0051172 | 265 | 0.143 | |
| regulation of transcription from rna polymerase ii promoter | GO:0006357 | 378 | 0.138 | |
| negative regulation of cellular macromolecule biosynthetic process | GO:2000113 | 267 | 0.130 | |
| negative regulation of cellular metabolic process | GO:0031324 | 382 | 0.109 | |
| organelle fission | GO:0048285 | 340 | 0.102 | |
| response to abiotic stimulus | GO:0009628 | 341 | 0.098 | |
| meiotic nuclear division | GO:0007126 | 151 | 0.098 | |
| signal transduction by phosphorylation | GO:0023014 | 107 | 0.096 | |
| intracellular signal transduction | GO:0035556 | 300 | 0.096 | |
| positive regulation of transcription from rna polymerase ii promoter | GO:0045944 | 204 | 0.092 | |
| protein acetylation | GO:0006473 | 39 | 0.084 | |
| response to radiation | GO:0009314 | 155 | 0.084 | |
| meiotic dna double strand break formation involved in reciprocal meiotic recombination | GO:0010780 | 1 | 0.080 | |
| negative regulation of rna biosynthetic process | GO:1902679 | 240 | 0.079 | |
| negative regulation of nucleobase containing compound metabolic process | GO:0045934 | 261 | 0.076 | |
| localization of cell | GO:0051674 | 257 | 0.071 | |
| positive regulation of response to stimulus | GO:0048584 | 323 | 0.070 | |
| negative regulation of rna metabolic process | GO:0051253 | 251 | 0.068 | |
| negative regulation of gene expression | GO:0010629 | 387 | 0.066 | |
| digestive tract development | GO:0048565 | 149 | 0.066 | |
| cell migration | GO:0016477 | 238 | 0.065 | |
| cellular response to dna damage stimulus | GO:0006974 | 223 | 0.065 | |
| positive regulation of signal transduction | GO:0009967 | 223 | 0.065 | |
| regulation of intracellular signal transduction | GO:1902531 | 236 | 0.062 | |
| neuronal stem cell division | GO:0036445 | 35 | 0.062 | |
| negative regulation of cellular biosynthetic process | GO:0031327 | 277 | 0.061 | |
| digestive tract morphogenesis | GO:0048546 | 127 | 0.055 | |
| peptidyl lysine modification | GO:0018205 | 57 | 0.052 | |
| histone h4 acetylation | GO:0043967 | 13 | 0.051 | |
| negative regulation of transcription from rna polymerase ii promoter | GO:0000122 | 119 | 0.051 | |
| embryonic morphogenesis | GO:0048598 | 206 | 0.050 | |
| cell death | GO:0008219 | 279 | 0.050 | |
| regulation of apoptotic process | GO:0042981 | 130 | 0.047 | |
| regulation of anatomical structure morphogenesis | GO:0022603 | 242 | 0.046 | |
| positive regulation of cell communication | GO:0010647 | 250 | 0.045 | |
| chromatin remodeling | GO:0006338 | 72 | 0.043 | |
| peptidyl amino acid modification | GO:0018193 | 105 | 0.040 | |
| meiotic dna double strand break formation | GO:0042138 | 1 | 0.040 | |
| homeostatic process | GO:0042592 | 199 | 0.038 | |
| cell division | GO:0051301 | 248 | 0.035 | |
| single organism biosynthetic process | GO:0044711 | 206 | 0.033 | |
| protein acylation | GO:0043543 | 42 | 0.032 | |
| defense response | GO:0006952 | 300 | 0.031 | |
| regulation of chromatin organization | GO:1902275 | 32 | 0.031 | |
| response to organic substance | GO:0010033 | 284 | 0.030 | |
| regulation of response to stress | GO:0080134 | 200 | 0.030 | |
| digestive system development | GO:0055123 | 149 | 0.030 | |
| programmed cell death | GO:0012501 | 257 | 0.030 | |
| mapk cascade | GO:0000165 | 107 | 0.029 | |
| negative regulation of macromolecule biosynthetic process | GO:0010558 | 270 | 0.028 | |
| establishment or maintenance of cell polarity | GO:0007163 | 167 | 0.028 | |
| negative regulation of small gtpase mediated signal transduction | GO:0051058 | 13 | 0.028 | |
| small gtpase mediated signal transduction | GO:0007264 | 88 | 0.027 | |
| regulation of mapk cascade | GO:0043408 | 92 | 0.027 | |
| positive regulation of signaling | GO:0023056 | 243 | 0.026 | |
| dna repair | GO:0006281 | 54 | 0.026 | |
| ras protein signal transduction | GO:0007265 | 88 | 0.026 | |
| negative regulation of intracellular signal transduction | GO:1902532 | 57 | 0.025 | |
| histone acetylation | GO:0016573 | 38 | 0.025 | |
| negative regulation of biosynthetic process | GO:0009890 | 277 | 0.025 | |
| negative regulation of signaling | GO:0023057 | 219 | 0.025 | |
| tube morphogenesis | GO:0035239 | 191 | 0.024 | |
| regulation of phosphate metabolic process | GO:0019220 | 210 | 0.024 | |
| cellular macromolecule localization | GO:0070727 | 220 | 0.024 | |
| negative regulation of signal transduction | GO:0009968 | 206 | 0.023 | |
| regulation of transport | GO:0051049 | 181 | 0.023 | |
| establishment of localization in cell | GO:0051649 | 402 | 0.023 | |
| internal protein amino acid acetylation | GO:0006475 | 38 | 0.023 | |
| phosphorylation | GO:0016310 | 294 | 0.023 | |
| endomembrane system organization | GO:0010256 | 119 | 0.023 | |
| proteolysis | GO:0006508 | 192 | 0.022 | |
| proteasomal protein catabolic process | GO:0010498 | 59 | 0.022 | |
| regulation of transmembrane receptor protein serine threonine kinase signaling pathway | GO:0090092 | 38 | 0.022 | |
| death | GO:0016265 | 284 | 0.022 | |
| appendage development | GO:0048736 | 401 | 0.022 | |
| regionalization | GO:0003002 | 416 | 0.022 | |
| regulation of cell differentiation | GO:0045595 | 302 | 0.022 | |
| regulation of phosphorylation | GO:0042325 | 147 | 0.022 | |
| modification dependent macromolecule catabolic process | GO:0043632 | 79 | 0.021 | |
| regulation of rna splicing | GO:0043484 | 69 | 0.021 | |
| regulation of chromatin modification | GO:1903308 | 28 | 0.020 | |
| regulation of protein metabolic process | GO:0051246 | 256 | 0.019 | |
| chromosome organization | GO:0051276 | 360 | 0.019 | |
| proteolysis involved in cellular protein catabolic process | GO:0051603 | 83 | 0.019 | |
| protein transport | GO:0015031 | 155 | 0.019 | |
| regulation of multicellular organismal development | GO:2000026 | 414 | 0.018 | |
| response to endogenous stimulus | GO:0009719 | 119 | 0.018 | |
| cell motility | GO:0048870 | 251 | 0.018 | |
| heart development | GO:0007507 | 82 | 0.018 | |
| regulation of erk1 and erk2 cascade | GO:0070372 | 39 | 0.018 | |
| neuroblast proliferation | GO:0007405 | 74 | 0.018 | |
| negative regulation of cell communication | GO:0010648 | 223 | 0.017 | |
| positive regulation of cellular protein metabolic process | GO:0032270 | 118 | 0.017 | |
| negative regulation of response to stimulus | GO:0048585 | 258 | 0.017 | |
| regulation of organelle organization | GO:0033043 | 196 | 0.017 | |
| histone methylation | GO:0016571 | 40 | 0.017 | |
| apoptotic process | GO:0006915 | 159 | 0.017 | |
| erk1 and erk2 cascade | GO:0070371 | 39 | 0.017 | |
| negative regulation of developmental process | GO:0051093 | 201 | 0.016 | |
| tube development | GO:0035295 | 244 | 0.016 | |
| regulation of localization | GO:0032879 | 275 | 0.016 | |
| immune system process | GO:0002376 | 347 | 0.016 | |
| eye development | GO:0001654 | 323 | 0.016 | |
| regulation of cell cycle process | GO:0010564 | 181 | 0.016 | |
| protein modification by small protein conjugation or removal | GO:0070647 | 106 | 0.016 | |
| organic substance catabolic process | GO:1901575 | 308 | 0.016 | |
| peptidyl threonine phosphorylation | GO:0018107 | 2 | 0.016 | |
| dorsal ventral pattern formation | GO:0009953 | 133 | 0.016 | |
| cellular protein catabolic process | GO:0044257 | 83 | 0.016 | |
| organic acid metabolic process | GO:0006082 | 103 | 0.015 | |
| macromolecule catabolic process | GO:0009057 | 161 | 0.015 | |
| single organism intracellular transport | GO:1902582 | 207 | 0.015 | |
| vesicle mediated transport | GO:0016192 | 381 | 0.015 | |
| spindle organization | GO:0007051 | 253 | 0.015 | |
| catabolic process | GO:0009056 | 409 | 0.015 | |
| embryonic hindgut morphogenesis | GO:0048619 | 48 | 0.015 | |
| mitotic spindle organization | GO:0007052 | 220 | 0.015 | |
| negative regulation of erk1 and erk2 cascade | GO:0070373 | 3 | 0.015 | |
| imaginal disc derived leg morphogenesis | GO:0007480 | 80 | 0.015 | |
| protein localization | GO:0008104 | 284 | 0.015 | |
| negative regulation of gene expression epigenetic | GO:0045814 | 77 | 0.014 | |
| macromolecular complex assembly | GO:0065003 | 256 | 0.014 | |
| protein alkylation | GO:0008213 | 43 | 0.014 | |
| regulation of nervous system development | GO:0051960 | 248 | 0.014 | |
| positive regulation of multicellular organismal process | GO:0051240 | 143 | 0.014 | |
| cytoplasmic transport | GO:0016482 | 130 | 0.014 | |
| membrane organization | GO:0061024 | 112 | 0.014 | |
| post embryonic appendage morphogenesis | GO:0035120 | 385 | 0.014 | |
| response to temperature stimulus | GO:0009266 | 106 | 0.014 | |
| regulation of phosphorus metabolic process | GO:0051174 | 210 | 0.014 | |
| convergent extension | GO:0060026 | 2 | 0.014 | |
| regulation of cell death | GO:0010941 | 173 | 0.013 | |
| response to heat | GO:0009408 | 63 | 0.013 | |
| developmental growth | GO:0048589 | 280 | 0.013 | |
| regulation of molecular function | GO:0065009 | 217 | 0.013 | |
| gastrulation | GO:0007369 | 70 | 0.013 | |
| stem cell differentiation | GO:0048863 | 117 | 0.013 | |
| protein methylation | GO:0006479 | 43 | 0.013 | |
| negative regulation of growth | GO:0045926 | 84 | 0.013 | |
| negative regulation of phosphate metabolic process | GO:0045936 | 45 | 0.013 | |
| regulation of meiosis | GO:0040020 | 3 | 0.013 | |
| circulatory system development | GO:0072359 | 82 | 0.012 | |
| appendage morphogenesis | GO:0035107 | 397 | 0.012 | |
| growth | GO:0040007 | 359 | 0.012 | |
| positive regulation of protein metabolic process | GO:0051247 | 128 | 0.012 | |
| aging | GO:0007568 | 143 | 0.012 | |
| negative regulation of cell proliferation | GO:0008285 | 69 | 0.012 | |
| single organism behavior | GO:0044708 | 391 | 0.012 | |
| enzyme linked receptor protein signaling pathway | GO:0007167 | 179 | 0.012 | |
| regulation of cellular protein metabolic process | GO:0032268 | 243 | 0.012 | |
| cellular macromolecule catabolic process | GO:0044265 | 136 | 0.012 | |
| positive regulation of intracellular signal transduction | GO:1902533 | 116 | 0.012 | |
| epithelial cell differentiation | GO:0030855 | 322 | 0.012 | |
| regulation of ras protein signal transduction | GO:0046578 | 93 | 0.011 | |
| regulation of small gtpase mediated signal transduction | GO:0051056 | 93 | 0.011 | |
| protein complex biogenesis | GO:0070271 | 201 | 0.011 | |
| negative regulation of cell differentiation | GO:0045596 | 143 | 0.011 | |
| asymmetric neuroblast division | GO:0055059 | 33 | 0.011 | |
| positive regulation of cellular component organization | GO:0051130 | 156 | 0.011 | |
| negative regulation of molecular function | GO:0044092 | 51 | 0.011 | |
| stem cell division | GO:0017145 | 69 | 0.011 | |
| negative regulation of epithelial cell proliferation | GO:0050680 | 4 | 0.011 | |
| gland development | GO:0048732 | 191 | 0.011 | |
| cell proliferation | GO:0008283 | 299 | 0.011 | |
| mrna processing | GO:0006397 | 104 | 0.011 | |
| intracellular transport | GO:0046907 | 228 | 0.011 | |
| cardiovascular system development | GO:0072358 | 82 | 0.011 | |
| nuclear division | GO:0000280 | 332 | 0.011 | |
| ubiquitin dependent protein catabolic process | GO:0006511 | 78 | 0.011 | |
| regulation of hemocyte proliferation | GO:0035206 | 37 | 0.010 | |
| positive regulation of developmental growth | GO:0048639 | 62 | 0.010 | |
| response to oxygen containing compound | GO:1901700 | 200 | 0.010 | |
| positive regulation of transferase activity | GO:0051347 | 26 | 0.010 | |
| single organism membrane organization | GO:0044802 | 93 | 0.010 | |
| positive regulation of phosphate metabolic process | GO:0045937 | 139 | 0.010 | |
| histone lysine methylation | GO:0034968 | 32 | 0.010 | |