| mrna metabolic process | GO:0016071 | 124 | 0.325 | |
| nuclear division | GO:0000280 | 332 | 0.162 | |
| cellular catabolic process | GO:0044248 | 372 | 0.109 | |
| rna catabolic process | GO:0006401 | 37 | 0.101 | |
| mrna catabolic process | GO:0006402 | 33 | 0.098 | |
| heterocycle catabolic process | GO:0046700 | 166 | 0.097 | |
| rna processing | GO:0006396 | 147 | 0.096 | |
| organelle fission | GO:0048285 | 340 | 0.079 | |
| macromolecule catabolic process | GO:0009057 | 161 | 0.069 | |
| positive regulation of biosynthetic process | GO:0009891 | 316 | 0.068 | |
| positive regulation of macromolecule metabolic process | GO:0010604 | 405 | 0.068 | |
| meiotic cell cycle | GO:0051321 | 171 | 0.061 | |
| catabolic process | GO:0009056 | 409 | 0.061 | |
| regulation of intracellular signal transduction | GO:1902531 | 236 | 0.058 | |
| dna integrity checkpoint | GO:0031570 | 81 | 0.058 | |
| positive regulation of nitrogen compound metabolic process | GO:0051173 | 354 | 0.058 | |
| mrna splicing via spliceosome | GO:0000398 | 73 | 0.056 | |
| transcription from rna polymerase ii promoter | GO:0006366 | 368 | 0.051 | |
| nucleobase containing compound catabolic process | GO:0034655 | 165 | 0.050 | |
| cellular nitrogen compound catabolic process | GO:0044270 | 165 | 0.049 | |
| negative regulation of gene expression | GO:0010629 | 387 | 0.048 | |
| endocytosis | GO:0006897 | 310 | 0.044 | |
| cellular macromolecule catabolic process | GO:0044265 | 136 | 0.043 | |
| organic cyclic compound catabolic process | GO:1901361 | 168 | 0.041 | |
| rna splicing via transesterification reactions with bulged adenosine as nucleophile | GO:0000377 | 73 | 0.040 | |
| vesicle mediated transport | GO:0016192 | 381 | 0.039 | |
| organic substance catabolic process | GO:1901575 | 308 | 0.038 | |
| regionalization | GO:0003002 | 416 | 0.037 | |
| dna dependent dna replication | GO:0006261 | 17 | 0.035 | |
| positive regulation of rna biosynthetic process | GO:1902680 | 266 | 0.033 | |
| posttranscriptional gene silencing | GO:0016441 | 46 | 0.032 | |
| regulation of protein metabolic process | GO:0051246 | 256 | 0.032 | |
| macromolecular complex assembly | GO:0065003 | 256 | 0.032 | |
| regulation of small gtpase mediated signal transduction | GO:0051056 | 93 | 0.032 | |
| spindle organization | GO:0007051 | 253 | 0.032 | |
| nucleobase containing small molecule metabolic process | GO:0055086 | 174 | 0.030 | |
| posttranscriptional gene silencing by rna | GO:0035194 | 45 | 0.029 | |
| dna metabolic process | GO:0006259 | 227 | 0.029 | |
| aromatic compound catabolic process | GO:0019439 | 166 | 0.029 | |
| mrna processing | GO:0006397 | 104 | 0.028 | |
| organelle assembly | GO:0070925 | 198 | 0.028 | |
| small gtpase mediated signal transduction | GO:0007264 | 88 | 0.028 | |
| multi organism behavior | GO:0051705 | 175 | 0.027 | |
| ncrna metabolic process | GO:0034660 | 43 | 0.026 | |
| taxis | GO:0042330 | 304 | 0.026 | |
| dna templated transcription initiation | GO:0006352 | 25 | 0.025 | |
| snrna 3 end processing | GO:0034472 | 14 | 0.025 | |
| meiotic nuclear division | GO:0007126 | 151 | 0.025 | |
| chromosome segregation | GO:0007059 | 157 | 0.024 | |
| ncrna processing | GO:0034470 | 30 | 0.024 | |
| positive regulation of nucleobase containing compound metabolic process | GO:0045935 | 332 | 0.023 | |
| positive regulation of cellular biosynthetic process | GO:0031328 | 316 | 0.023 | |
| positive regulation of transcription dna templated | GO:0045893 | 266 | 0.023 | |
| amine metabolic process | GO:0009308 | 12 | 0.023 | |
| negative regulation of cell cycle phase transition | GO:1901988 | 103 | 0.023 | |
| negative regulation of nitrogen compound metabolic process | GO:0051172 | 265 | 0.022 | |
| regulation of cellular catabolic process | GO:0031329 | 157 | 0.022 | |
| regulation of cell cycle process | GO:0010564 | 181 | 0.022 | |
| positive regulation of response to stimulus | GO:0048584 | 323 | 0.022 | |
| negative regulation of cell cycle | GO:0045786 | 116 | 0.020 | |
| purine containing compound metabolic process | GO:0072521 | 155 | 0.020 | |
| nucleoside phosphate metabolic process | GO:0006753 | 162 | 0.020 | |
| rna 3 end processing | GO:0031123 | 45 | 0.020 | |
| body morphogenesis | GO:0010171 | 2 | 0.020 | |
| mitotic cell cycle checkpoint | GO:0007093 | 88 | 0.020 | |
| phosphorylation | GO:0016310 | 294 | 0.020 | |
| positive regulation of macromolecule biosynthetic process | GO:0010557 | 283 | 0.020 | |
| negative regulation of cell cycle process | GO:0010948 | 109 | 0.020 | |
| small molecule metabolic process | GO:0044281 | 305 | 0.019 | |
| multicellular organismal aging | GO:0010259 | 140 | 0.019 | |
| negative regulation of response to stimulus | GO:0048585 | 258 | 0.019 | |
| snrna metabolic process | GO:0016073 | 14 | 0.019 | |
| carbohydrate derivative metabolic process | GO:1901135 | 217 | 0.019 | |
| positive regulation of cell communication | GO:0010647 | 250 | 0.018 | |
| lateral inhibition | GO:0046331 | 206 | 0.018 | |
| regulation of ras protein signal transduction | GO:0046578 | 93 | 0.018 | |
| regulation of cell death | GO:0010941 | 173 | 0.018 | |
| regulation of rna splicing | GO:0043484 | 69 | 0.018 | |
| ras protein signal transduction | GO:0007265 | 88 | 0.018 | |
| mitotic nuclear division | GO:0007067 | 213 | 0.018 | |
| regulation of alternative mrna splicing via spliceosome | GO:0000381 | 60 | 0.018 | |
| cell cycle checkpoint | GO:0000075 | 95 | 0.018 | |
| response to abiotic stimulus | GO:0009628 | 341 | 0.017 | |
| dna damage checkpoint | GO:0000077 | 78 | 0.017 | |
| positive regulation of signaling | GO:0023056 | 243 | 0.017 | |
| mitotic dna integrity checkpoint | GO:0044774 | 75 | 0.017 | |
| programmed cell death | GO:0012501 | 257 | 0.017 | |
| organophosphate metabolic process | GO:0019637 | 195 | 0.017 | |
| gonad development | GO:0008406 | 50 | 0.017 | |
| cellular amine metabolic process | GO:0044106 | 12 | 0.017 | |
| mitotic sister chromatid segregation | GO:0000070 | 87 | 0.017 | |
| mitotic cell cycle phase transition | GO:0044772 | 138 | 0.017 | |
| regulation of gene expression epigenetic | GO:0040029 | 128 | 0.017 | |
| positive regulation of nucleic acid templated transcription | GO:1903508 | 266 | 0.016 | |
| negative regulation of mitotic cell cycle | GO:0045930 | 109 | 0.016 | |
| rna splicing via transesterification reactions | GO:0000375 | 73 | 0.016 | |
| cellular response to dna damage stimulus | GO:0006974 | 223 | 0.016 | |
| reproductive system development | GO:0061458 | 74 | 0.016 | |
| dna replication | GO:0006260 | 48 | 0.016 | |
| mitotic dna damage checkpoint | GO:0044773 | 74 | 0.016 | |
| sex differentiation | GO:0007548 | 81 | 0.016 | |
| regulation of cell morphogenesis | GO:0022604 | 163 | 0.016 | |
| negative regulation of signal transduction | GO:0009968 | 206 | 0.016 | |
| organonitrogen compound metabolic process | GO:1901564 | 318 | 0.015 | |
| response to biotic stimulus | GO:0009607 | 294 | 0.015 | |
| negative regulation of signaling | GO:0023057 | 219 | 0.015 | |
| negative regulation of nucleic acid templated transcription | GO:1903507 | 240 | 0.015 | |
| negative regulation of cell communication | GO:0010648 | 223 | 0.015 | |
| regulation of cell cycle phase transition | GO:1901987 | 130 | 0.014 | |
| negative regulation of biosynthetic process | GO:0009890 | 277 | 0.014 | |
| positive regulation of signal transduction | GO:0009967 | 223 | 0.014 | |
| phagocytosis | GO:0006909 | 215 | 0.014 | |
| cell death | GO:0008219 | 279 | 0.014 | |
| nucleotide metabolic process | GO:0009117 | 161 | 0.013 | |
| nuclear transcribed mrna catabolic process | GO:0000956 | 24 | 0.013 | |
| positive regulation of phosphorus metabolic process | GO:0010562 | 139 | 0.013 | |
| negative regulation of cellular biosynthetic process | GO:0031327 | 277 | 0.013 | |
| rrna processing | GO:0006364 | 3 | 0.013 | |
| neuroblast proliferation | GO:0007405 | 74 | 0.013 | |
| ribose phosphate metabolic process | GO:0019693 | 145 | 0.013 | |
| negative regulation of transcription dna templated | GO:0045892 | 237 | 0.013 | |
| neurological system process | GO:0050877 | 358 | 0.012 | |
| gene silencing by rna | GO:0031047 | 57 | 0.012 | |
| exocrine system development | GO:0035272 | 162 | 0.012 | |
| mapk cascade | GO:0000165 | 107 | 0.012 | |
| nuclear transport | GO:0051169 | 72 | 0.012 | |
| cellular amino acid metabolic process | GO:0006520 | 61 | 0.012 | |
| protein complex assembly | GO:0006461 | 200 | 0.012 | |
| apoptotic process | GO:0006915 | 159 | 0.012 | |
| regulation of hydrolase activity | GO:0051336 | 97 | 0.012 | |
| regulation of phosphate metabolic process | GO:0019220 | 210 | 0.012 | |
| mitotic g2 dna damage checkpoint | GO:0007095 | 69 | 0.012 | |
| cell cycle phase transition | GO:0044770 | 140 | 0.011 | |
| immune response | GO:0006955 | 246 | 0.011 | |
| protein complex biogenesis | GO:0070271 | 201 | 0.011 | |
| open tracheal system development | GO:0007424 | 204 | 0.011 | |
| positive regulation of phosphate metabolic process | GO:0045937 | 139 | 0.011 | |
| positive regulation of gene expression | GO:0010628 | 290 | 0.011 | |
| regulation of cellular protein metabolic process | GO:0032268 | 243 | 0.011 | |
| cell division | GO:0051301 | 248 | 0.011 | |
| posttranscriptional regulation of gene expression | GO:0010608 | 145 | 0.011 | |
| g2 dna damage checkpoint | GO:0031572 | 69 | 0.011 | |
| positive regulation of rna metabolic process | GO:0051254 | 271 | 0.011 | |
| regulation of phosphorylation | GO:0042325 | 147 | 0.011 | |
| regulation of multicellular organismal development | GO:2000026 | 414 | 0.011 | |
| compound eye development | GO:0048749 | 307 | 0.011 | |
| morphogenesis of an epithelium | GO:0002009 | 276 | 0.011 | |
| organic substance transport | GO:0071702 | 257 | 0.011 | |
| regulation of mitotic cell cycle | GO:0007346 | 190 | 0.011 | |
| intracellular signal transduction | GO:0035556 | 300 | 0.010 | |
| negative regulation of epithelial cell proliferation | GO:0050680 | 4 | 0.010 | |