| proteolysis | GO:0006508 | 192 | 0.062 | |
| spermatid development | GO:0007286 | 98 | 0.057 | |
| aging | GO:0007568 | 143 | 0.057 | |
| carboxylic acid metabolic process | GO:0019752 | 92 | 0.053 | |
| organic substance catabolic process | GO:1901575 | 308 | 0.050 | |
| macromolecule catabolic process | GO:0009057 | 161 | 0.047 | |
| determination of adult lifespan | GO:0008340 | 137 | 0.047 | |
| cellular macromolecule catabolic process | GO:0044265 | 136 | 0.043 | |
| catabolic process | GO:0009056 | 409 | 0.041 | |
| organic substance transport | GO:0071702 | 257 | 0.039 | |
| ubiquitin dependent protein catabolic process | GO:0006511 | 78 | 0.037 | |
| organelle fission | GO:0048285 | 340 | 0.036 | |
| modification dependent protein catabolic process | GO:0019941 | 78 | 0.035 | |
| protein complex assembly | GO:0006461 | 200 | 0.035 | |
| nuclear division | GO:0000280 | 332 | 0.034 | |
| proteasomal protein catabolic process | GO:0010498 | 59 | 0.033 | |
| cellular protein catabolic process | GO:0044257 | 83 | 0.033 | |
| protein modification process | GO:0036211 | 438 | 0.033 | |
| cellular catabolic process | GO:0044248 | 372 | 0.031 | |
| negative regulation of cell communication | GO:0010648 | 223 | 0.031 | |
| mitochondrion organization | GO:0007005 | 65 | 0.030 | |
| negative regulation of response to stimulus | GO:0048585 | 258 | 0.029 | |
| regulation of phosphate metabolic process | GO:0019220 | 210 | 0.028 | |
| negative regulation of signaling | GO:0023057 | 219 | 0.028 | |
| modification dependent macromolecule catabolic process | GO:0043632 | 79 | 0.028 | |
| vesicle mediated transport | GO:0016192 | 381 | 0.028 | |
| cellular protein modification process | GO:0006464 | 438 | 0.027 | |
| protein localization | GO:0008104 | 284 | 0.027 | |
| spermatid differentiation | GO:0048515 | 114 | 0.025 | |
| death | GO:0016265 | 284 | 0.025 | |
| phosphorylation | GO:0016310 | 294 | 0.024 | |
| enzyme linked receptor protein signaling pathway | GO:0007167 | 179 | 0.024 | |
| protein complex biogenesis | GO:0070271 | 201 | 0.023 | |
| muscle organ development | GO:0007517 | 127 | 0.023 | |
| single organism carbohydrate metabolic process | GO:0044723 | 72 | 0.022 | |
| regulation of phosphorylation | GO:0042325 | 147 | 0.021 | |
| single organism intracellular transport | GO:1902582 | 207 | 0.021 | |
| positive regulation of cell communication | GO:0010647 | 250 | 0.021 | |
| phagocytosis | GO:0006909 | 215 | 0.021 | |
| small molecule metabolic process | GO:0044281 | 305 | 0.020 | |
| protein catabolic process | GO:0030163 | 101 | 0.020 | |
| cell death | GO:0008219 | 279 | 0.020 | |
| cytoplasmic transport | GO:0016482 | 130 | 0.020 | |
| multicellular organismal aging | GO:0010259 | 140 | 0.019 | |
| cellular macromolecular complex assembly | GO:0034622 | 153 | 0.019 | |
| response to hypoxia | GO:0001666 | 53 | 0.019 | |
| cellular protein localization | GO:0034613 | 160 | 0.019 | |
| oxoacid metabolic process | GO:0043436 | 103 | 0.018 | |
| apoptotic process | GO:0006915 | 159 | 0.018 | |
| macromolecular complex assembly | GO:0065003 | 256 | 0.018 | |
| negative regulation of signal transduction | GO:0009968 | 206 | 0.018 | |
| regulation of transport | GO:0051049 | 181 | 0.017 | |
| male gamete generation | GO:0048232 | 201 | 0.017 | |
| intracellular signal transduction | GO:0035556 | 300 | 0.017 | |
| protein modification by small protein conjugation or removal | GO:0070647 | 106 | 0.017 | |
| spermatogenesis | GO:0007283 | 200 | 0.016 | |
| actin filament based process | GO:0030029 | 220 | 0.016 | |
| regulation of phosphorus metabolic process | GO:0051174 | 210 | 0.016 | |
| regulation of cellular ketone metabolic process | GO:0010565 | 3 | 0.016 | |
| positive regulation of response to stimulus | GO:0048584 | 323 | 0.016 | |
| endocytosis | GO:0006897 | 310 | 0.016 | |
| regulation of cellular protein metabolic process | GO:0032268 | 243 | 0.015 | |
| organelle assembly | GO:0070925 | 198 | 0.015 | |
| proteolysis involved in cellular protein catabolic process | GO:0051603 | 83 | 0.015 | |
| transmembrane receptor protein tyrosine kinase signaling pathway | GO:0007169 | 116 | 0.015 | |
| protein transport | GO:0015031 | 155 | 0.015 | |
| cellular component assembly involved in morphogenesis | GO:0010927 | 151 | 0.015 | |
| protein phosphorylation | GO:0006468 | 169 | 0.014 | |
| chromosome organization | GO:0051276 | 360 | 0.014 | |
| organic acid metabolic process | GO:0006082 | 103 | 0.014 | |
| regulation of protein metabolic process | GO:0051246 | 256 | 0.013 | |
| regulation of protein complex assembly | GO:0043254 | 42 | 0.013 | |
| homeostatic process | GO:0042592 | 199 | 0.013 | |
| developmental programmed cell death | GO:0010623 | 138 | 0.013 | |
| cellular amine metabolic process | GO:0044106 | 12 | 0.013 | |
| respiratory system development | GO:0060541 | 213 | 0.013 | |
| response to external biotic stimulus | GO:0043207 | 293 | 0.012 | |
| positive regulation of biosynthetic process | GO:0009891 | 316 | 0.012 | |
| response to abiotic stimulus | GO:0009628 | 341 | 0.012 | |
| negative regulation of biosynthetic process | GO:0009890 | 277 | 0.012 | |
| ion transport | GO:0006811 | 145 | 0.012 | |
| response to heat | GO:0009408 | 63 | 0.012 | |
| response to other organism | GO:0051707 | 293 | 0.012 | |
| muscle structure development | GO:0061061 | 224 | 0.012 | |
| embryo development ending in birth or egg hatching | GO:0009792 | 152 | 0.012 | |
| cilium assembly | GO:0042384 | 38 | 0.012 | |
| negative regulation of cell differentiation | GO:0045596 | 143 | 0.012 | |
| positive regulation of signal transduction | GO:0009967 | 223 | 0.012 | |
| imaginal disc growth | GO:0007446 | 37 | 0.012 | |
| proteasome mediated ubiquitin dependent protein catabolic process | GO:0043161 | 54 | 0.012 | |
| peptidyl amino acid modification | GO:0018193 | 105 | 0.011 | |
| cellular protein complex assembly | GO:0043623 | 71 | 0.011 | |
| nucleoside phosphate catabolic process | GO:1901292 | 110 | 0.011 | |
| nuclear transport | GO:0051169 | 72 | 0.011 | |
| regulation of cellular localization | GO:0060341 | 136 | 0.011 | |
| establishment of protein localization | GO:0045184 | 163 | 0.011 | |
| single organism catabolic process | GO:0044712 | 228 | 0.011 | |
| response to oxygen levels | GO:0070482 | 59 | 0.011 | |
| reactive oxygen species metabolic process | GO:0072593 | 22 | 0.011 | |
| notch signaling pathway | GO:0007219 | 120 | 0.011 | |
| regulation of catalytic activity | GO:0050790 | 185 | 0.010 | |
| positive regulation of signaling | GO:0023056 | 243 | 0.010 | |
| intracellular transport | GO:0046907 | 228 | 0.010 | |
