| intracellular signal transduction | GO:0035556 | 300 | 0.282 | |
| negative regulation of gene expression | GO:0010629 | 387 | 0.259 | |
| ras protein signal transduction | GO:0007265 | 88 | 0.239 | |
| catabolic process | GO:0009056 | 409 | 0.188 | |
| macromolecular complex assembly | GO:0065003 | 256 | 0.187 | |
| muscle structure development | GO:0061061 | 224 | 0.169 | |
| negative regulation of cellular metabolic process | GO:0031324 | 382 | 0.156 | |
| negative regulation of rna biosynthetic process | GO:1902679 | 240 | 0.153 | |
| regulation of intracellular signal transduction | GO:1902531 | 236 | 0.125 | |
| regulation of transcription from rna polymerase ii promoter | GO:0006357 | 378 | 0.124 | |
| transcription from rna polymerase ii promoter | GO:0006366 | 368 | 0.119 | |
| positive regulation of signaling | GO:0023056 | 243 | 0.117 | |
| small gtpase mediated signal transduction | GO:0007264 | 88 | 0.115 | |
| cellular catabolic process | GO:0044248 | 372 | 0.114 | |
| regulation of small gtpase mediated signal transduction | GO:0051056 | 93 | 0.114 | |
| regulation of gene expression epigenetic | GO:0040029 | 128 | 0.111 | |
| single organism membrane organization | GO:0044802 | 93 | 0.096 | |
| cellular response to dna damage stimulus | GO:0006974 | 223 | 0.094 | |
| negative regulation of cellular macromolecule biosynthetic process | GO:2000113 | 267 | 0.086 | |
| negative regulation of cellular biosynthetic process | GO:0031327 | 277 | 0.086 | |
| positive regulation of response to stimulus | GO:0048584 | 323 | 0.082 | |
| cellular macromolecular complex assembly | GO:0034622 | 153 | 0.081 | |
| positive regulation of macromolecule metabolic process | GO:0010604 | 405 | 0.080 | |
| negative regulation of macromolecule biosynthetic process | GO:0010558 | 270 | 0.074 | |
| positive regulation of phosphorus metabolic process | GO:0010562 | 139 | 0.069 | |
| muscle cell differentiation | GO:0042692 | 103 | 0.069 | |
| regulation of ras protein signal transduction | GO:0046578 | 93 | 0.067 | |
| macromolecule catabolic process | GO:0009057 | 161 | 0.067 | |
| positive regulation of nucleoside metabolic process | GO:0045979 | 47 | 0.064 | |
| protein complex biogenesis | GO:0070271 | 201 | 0.062 | |
| regulation of cellular catabolic process | GO:0031329 | 157 | 0.061 | |
| protein modification process | GO:0036211 | 438 | 0.061 | |
| gene silencing | GO:0016458 | 138 | 0.059 | |
| organelle assembly | GO:0070925 | 198 | 0.058 | |
| negative regulation of nitrogen compound metabolic process | GO:0051172 | 265 | 0.057 | |
| negative regulation of biosynthetic process | GO:0009890 | 277 | 0.057 | |
| regulation of cellular response to stress | GO:0080135 | 89 | 0.056 | |
| organic cyclic compound catabolic process | GO:1901361 | 168 | 0.053 | |
| cellular macromolecule catabolic process | GO:0044265 | 136 | 0.053 | |
| single organism intracellular transport | GO:1902582 | 207 | 0.052 | |
| heterocycle catabolic process | GO:0046700 | 166 | 0.052 | |
| regulation of phosphate metabolic process | GO:0019220 | 210 | 0.049 | |
| negative regulation of transcription dna templated | GO:0045892 | 237 | 0.048 | |
| regulation of neurogenesis | GO:0050767 | 158 | 0.048 | |
| negative regulation of signaling | GO:0023057 | 219 | 0.047 | |
| positive regulation of transcription from rna polymerase ii promoter | GO:0045944 | 204 | 0.046 | |
| endocytosis | GO:0006897 | 310 | 0.046 | |
| body morphogenesis | GO:0010171 | 2 | 0.045 | |
| purine nucleoside triphosphate catabolic process | GO:0009146 | 108 | 0.045 | |
| protein complex assembly | GO:0006461 | 200 | 0.044 | |
| negative regulation of nucleic acid templated transcription | GO:1903507 | 240 | 0.044 | |
| positive regulation of nucleic acid templated transcription | GO:1903508 | 266 | 0.044 | |
| actin filament based process | GO:0030029 | 220 | 0.043 | |
| positive regulation of cell communication | GO:0010647 | 250 | 0.042 | |
| regulation of nucleotide catabolic process | GO:0030811 | 48 | 0.042 | |
| phagocytosis | GO:0006909 | 215 | 0.042 | |
| positive regulation of gene expression | GO:0010628 | 290 | 0.042 | |
| regulation of vesicle mediated transport | GO:0060627 | 59 | 0.042 | |
| cell death | GO:0008219 | 279 | 0.041 | |
| positive regulation of rna metabolic process | GO:0051254 | 271 | 0.041 | |
| protein dna complex assembly | GO:0065004 | 63 | 0.040 | |
| positive regulation of rna biosynthetic process | GO:1902680 | 266 | 0.039 | |
| regionalization | GO:0003002 | 416 | 0.038 | |
| chemical homeostasis | GO:0048878 | 92 | 0.038 | |
| actin filament organization | GO:0007015 | 126 | 0.037 | |
| protein dna complex subunit organization | GO:0071824 | 86 | 0.037 | |
| negative regulation of response to stimulus | GO:0048585 | 258 | 0.037 | |
| positive regulation of phosphate metabolic process | GO:0045937 | 139 | 0.035 | |
| ribonucleoside triphosphate catabolic process | GO:0009203 | 108 | 0.034 | |
| negative regulation of cell communication | GO:0010648 | 223 | 0.034 | |
| negative regulation of nucleobase containing compound metabolic process | GO:0045934 | 261 | 0.034 | |
| single organism catabolic process | GO:0044712 | 228 | 0.033 | |
| striated muscle cell differentiation | GO:0051146 | 90 | 0.033 | |
| enzyme linked receptor protein signaling pathway | GO:0007167 | 179 | 0.033 | |
| positive regulation of cellular biosynthetic process | GO:0031328 | 316 | 0.033 | |
| epithelial cell development | GO:0002064 | 274 | 0.033 | |
| organic substance catabolic process | GO:1901575 | 308 | 0.033 | |
| regulation of protein metabolic process | GO:0051246 | 256 | 0.033 | |
| positive regulation of developmental process | GO:0051094 | 143 | 0.033 | |
| cellular nitrogen compound catabolic process | GO:0044270 | 165 | 0.032 | |
| cell projection assembly | GO:0030031 | 94 | 0.031 | |
| chromatin silencing | GO:0006342 | 76 | 0.030 | |
| carbohydrate derivative metabolic process | GO:1901135 | 217 | 0.030 | |
| negative regulation of rna metabolic process | GO:0051253 | 251 | 0.030 | |
| regulation of cell morphogenesis | GO:0022604 | 163 | 0.029 | |
| actin cytoskeleton organization | GO:0030036 | 206 | 0.029 | |
| vesicle mediated transport | GO:0016192 | 381 | 0.028 | |
| proteolysis involved in cellular protein catabolic process | GO:0051603 | 83 | 0.028 | |
| negative regulation of signal transduction | GO:0009968 | 206 | 0.028 | |
| cellular protein modification process | GO:0006464 | 438 | 0.027 | |
| positive regulation of nucleobase containing compound metabolic process | GO:0045935 | 332 | 0.027 | |
| positive regulation of nitrogen compound metabolic process | GO:0051173 | 354 | 0.027 | |
| aromatic compound catabolic process | GO:0019439 | 166 | 0.027 | |
| mapk cascade | GO:0000165 | 107 | 0.027 | |
| regulation of cell differentiation | GO:0045595 | 302 | 0.027 | |
| negative regulation of gene expression epigenetic | GO:0045814 | 77 | 0.026 | |
| mitotic cell cycle phase transition | GO:0044772 | 138 | 0.025 | |
| cellular component assembly involved in morphogenesis | GO:0010927 | 151 | 0.025 | |
| posttranscriptional gene silencing | GO:0016441 | 46 | 0.025 | |
| response to nitrogen compound | GO:1901698 | 90 | 0.024 | |
| embryo development ending in birth or egg hatching | GO:0009792 | 152 | 0.023 | |
| regulation of mapk cascade | GO:0043408 | 92 | 0.023 | |
| secretion | GO:0046903 | 109 | 0.022 | |
| ribonucleoside catabolic process | GO:0042454 | 112 | 0.022 | |
| embryonic pattern specification | GO:0009880 | 174 | 0.022 | |
| apoptotic process | GO:0006915 | 159 | 0.022 | |
| positive regulation of transcription dna templated | GO:0045893 | 266 | 0.022 | |
| cell motility | GO:0048870 | 251 | 0.022 | |
| protein localization | GO:0008104 | 284 | 0.021 | |
| larval development | GO:0002164 | 104 | 0.020 | |
| positive regulation of signal transduction | GO:0009967 | 223 | 0.020 | |
| single organism behavior | GO:0044708 | 391 | 0.020 | |
| cellular protein complex assembly | GO:0043623 | 71 | 0.020 | |
| meiotic cell cycle | GO:0051321 | 171 | 0.020 | |
| positive regulation of mapk cascade | GO:0043410 | 63 | 0.019 | |
| cell cycle phase transition | GO:0044770 | 140 | 0.019 | |
| regulation of cell projection organization | GO:0031344 | 92 | 0.019 | |
| modification dependent macromolecule catabolic process | GO:0043632 | 79 | 0.018 | |
| establishment of localization in cell | GO:0051649 | 402 | 0.018 | |
| positive regulation of phosphorylation | GO:0042327 | 87 | 0.018 | |
| gland development | GO:0048732 | 191 | 0.018 | |
| transmembrane receptor protein tyrosine kinase signaling pathway | GO:0007169 | 116 | 0.018 | |
| positive regulation of ras protein signal transduction | GO:0046579 | 43 | 0.018 | |
| tissue morphogenesis | GO:0048729 | 297 | 0.018 | |
| negative regulation of nervous system development | GO:0051961 | 92 | 0.018 | |
| cellular macromolecule localization | GO:0070727 | 220 | 0.018 | |
| regulation of purine nucleotide metabolic process | GO:1900542 | 62 | 0.018 | |
| glycosyl compound metabolic process | GO:1901657 | 127 | 0.017 | |
| regulation of apoptotic process | GO:0042981 | 130 | 0.017 | |
| signal transduction by phosphorylation | GO:0023014 | 107 | 0.017 | |
| homeostatic process | GO:0042592 | 199 | 0.016 | |
| protein catabolic process | GO:0030163 | 101 | 0.016 | |
| regulation of nervous system development | GO:0051960 | 248 | 0.016 | |
| regulation of anatomical structure morphogenesis | GO:0022603 | 242 | 0.016 | |
| regulation of cellular protein metabolic process | GO:0032268 | 243 | 0.016 | |
| negative regulation of developmental process | GO:0051093 | 201 | 0.016 | |
| regulation of catabolic process | GO:0009894 | 170 | 0.016 | |
| regulation of mitotic cell cycle | GO:0007346 | 190 | 0.016 | |
| g2 dna damage checkpoint | GO:0031572 | 69 | 0.016 | |
| regulation of cell cycle | GO:0051726 | 291 | 0.015 | |
| tube morphogenesis | GO:0035239 | 191 | 0.015 | |
| response to organonitrogen compound | GO:0010243 | 75 | 0.015 | |
| gtp catabolic process | GO:0006184 | 72 | 0.015 | |
| intracellular transport | GO:0046907 | 228 | 0.014 | |
| ribonucleotide metabolic process | GO:0009259 | 145 | 0.014 | |
| dna integrity checkpoint | GO:0031570 | 81 | 0.014 | |
| negative regulation of cellular component organization | GO:0051129 | 108 | 0.014 | |
| organonitrogen compound catabolic process | GO:1901565 | 128 | 0.014 | |
| purine ribonucleoside triphosphate catabolic process | GO:0009207 | 108 | 0.014 | |
| positive regulation of intracellular signal transduction | GO:1902533 | 116 | 0.014 | |
| regulation of multicellular organismal development | GO:2000026 | 414 | 0.014 | |
| ribonucleoside metabolic process | GO:0009119 | 127 | 0.014 | |
| regulation of purine nucleotide catabolic process | GO:0033121 | 48 | 0.014 | |
| regulation of cell shape | GO:0008360 | 113 | 0.013 | |
| proteolysis | GO:0006508 | 192 | 0.013 | |
| nucleobase containing compound catabolic process | GO:0034655 | 165 | 0.013 | |
| programmed cell death | GO:0012501 | 257 | 0.013 | |
| purine nucleotide metabolic process | GO:0006163 | 146 | 0.013 | |
| phosphorylation | GO:0016310 | 294 | 0.013 | |
| secretion by cell | GO:0032940 | 101 | 0.013 | |
| regulation of mitotic cell cycle phase transition | GO:1901990 | 130 | 0.013 | |
| anterior posterior pattern specification | GO:0009952 | 136 | 0.013 | |
| positive regulation of cell differentiation | GO:0045597 | 64 | 0.013 | |
| positive regulation of catabolic process | GO:0009896 | 105 | 0.013 | |
| organic substance transport | GO:0071702 | 257 | 0.013 | |
| dna damage checkpoint | GO:0000077 | 78 | 0.013 | |
| cell proliferation | GO:0008283 | 299 | 0.013 | |
| positive regulation of hydrolase activity | GO:0051345 | 78 | 0.013 | |
| purine nucleoside catabolic process | GO:0006152 | 112 | 0.012 | |
| positive regulation of cellular component biogenesis | GO:0044089 | 80 | 0.012 | |
| morphogenesis of an epithelium | GO:0002009 | 276 | 0.012 | |
| dna templated transcription initiation | GO:0006352 | 25 | 0.012 | |
| positive regulation of multicellular organismal process | GO:0051240 | 143 | 0.012 | |
| cellular response to nitrogen compound | GO:1901699 | 51 | 0.012 | |
| carbohydrate derivative catabolic process | GO:1901136 | 118 | 0.012 | |
| regulation of cell cycle process | GO:0010564 | 181 | 0.012 | |
| regulation of programmed cell death | GO:0043067 | 152 | 0.011 | |
| gtp metabolic process | GO:0046039 | 72 | 0.011 | |
| epithelial cell differentiation | GO:0030855 | 322 | 0.011 | |
| smoothened signaling pathway | GO:0007224 | 49 | 0.011 | |
| gene silencing by rna | GO:0031047 | 57 | 0.011 | |
| negative regulation of cell cycle | GO:0045786 | 116 | 0.011 | |
| embryonic morphogenesis | GO:0048598 | 206 | 0.011 | |
| cellular protein catabolic process | GO:0044257 | 83 | 0.011 | |
| purine nucleotide catabolic process | GO:0006195 | 109 | 0.011 | |
| death | GO:0016265 | 284 | 0.011 | |
| regulation of response to stress | GO:0080134 | 200 | 0.011 | |
| regulation of hydrolase activity | GO:0051336 | 97 | 0.011 | |
| regulation of localization | GO:0032879 | 275 | 0.011 | |
| regulation of cytoskeleton organization | GO:0051493 | 89 | 0.011 | |
| cognition | GO:0050890 | 141 | 0.011 | |
| regulation of nucleotide metabolic process | GO:0006140 | 62 | 0.011 | |
| cuticle development | GO:0042335 | 86 | 0.011 | |
| negative regulation of intracellular signal transduction | GO:1902532 | 57 | 0.011 | |
| protein transport | GO:0015031 | 155 | 0.011 | |
| regulation of cell cycle phase transition | GO:1901987 | 130 | 0.010 | |
| nucleus localization | GO:0051647 | 34 | 0.010 | |
| peptidyl amino acid modification | GO:0018193 | 105 | 0.010 | |
| cellular response to chemical stimulus | GO:0070887 | 199 | 0.010 | |
| symbiosis encompassing mutualism through parasitism | GO:0044403 | 16 | 0.010 | |
| mitotic cell cycle checkpoint | GO:0007093 | 88 | 0.010 | |
| segmentation | GO:0035282 | 207 | 0.010 | |
| transcription initiation from rna polymerase ii promoter | GO:0006367 | 25 | 0.010 | |
| positive regulation of purine nucleotide catabolic process | GO:0033123 | 46 | 0.010 | |
| positive regulation of cellular component organization | GO:0051130 | 156 | 0.010 | |
