| embryonic development via the syncytial blastoderm | GO:0001700 | 148 | 0.281 | |
| intracellular protein transmembrane import | GO:0044743 | 4 | 0.129 | |
| transmembrane transport | GO:0055085 | 139 | 0.097 | |
| intracellular protein transmembrane transport | GO:0065002 | 4 | 0.076 | |
| protein transmembrane transport | GO:0071806 | 4 | 0.072 | |
| single organism cellular localization | GO:1902580 | 180 | 0.068 | |
| neurological system process | GO:0050877 | 358 | 0.060 | |
| negative regulation of cell communication | GO:0010648 | 223 | 0.060 | |
| negative regulation of signaling | GO:0023057 | 219 | 0.057 | |
| establishment of protein localization | GO:0045184 | 163 | 0.055 | |
| axon development | GO:0061564 | 297 | 0.051 | |
| regulation of neurogenesis | GO:0050767 | 158 | 0.046 | |
| organonitrogen compound metabolic process | GO:1901564 | 318 | 0.041 | |
| cellular catabolic process | GO:0044248 | 372 | 0.040 | |
| mitochondrion organization | GO:0007005 | 65 | 0.039 | |
| negative regulation of response to stimulus | GO:0048585 | 258 | 0.037 | |
| nuclear division | GO:0000280 | 332 | 0.037 | |
| transcription from rna polymerase ii promoter | GO:0006366 | 368 | 0.037 | |
| negative regulation of nucleobase containing compound metabolic process | GO:0045934 | 261 | 0.037 | |
| cellular macromolecular complex assembly | GO:0034622 | 153 | 0.036 | |
| dna metabolic process | GO:0006259 | 227 | 0.035 | |
| negative regulation of nitrogen compound metabolic process | GO:0051172 | 265 | 0.034 | |
| regulation of neuron differentiation | GO:0045664 | 103 | 0.034 | |
| phagocytosis | GO:0006909 | 215 | 0.034 | |
| regulation of immune system process | GO:0002682 | 176 | 0.034 | |
| positive regulation of multicellular organismal process | GO:0051240 | 143 | 0.032 | |
| embryo development ending in birth or egg hatching | GO:0009792 | 152 | 0.031 | |
| positive regulation of cell communication | GO:0010647 | 250 | 0.031 | |
| regulation of phosphorus metabolic process | GO:0051174 | 210 | 0.031 | |
| vesicle mediated transport | GO:0016192 | 381 | 0.031 | |
| cell death | GO:0008219 | 279 | 0.030 | |
| negative regulation of mitotic cell cycle | GO:0045930 | 109 | 0.028 | |
| protein import | GO:0017038 | 55 | 0.027 | |
| intracellular signal transduction | GO:0035556 | 300 | 0.027 | |
| photoreceptor cell differentiation | GO:0046530 | 170 | 0.026 | |
| endocytosis | GO:0006897 | 310 | 0.026 | |
| regulation of developmental growth | GO:0048638 | 174 | 0.026 | |
| negative regulation of signal transduction | GO:0009968 | 206 | 0.025 | |
| positive regulation of developmental process | GO:0051094 | 143 | 0.025 | |
| chromosome organization | GO:0051276 | 360 | 0.025 | |
| single organism intracellular transport | GO:1902582 | 207 | 0.024 | |
| regulation of anatomical structure morphogenesis | GO:0022603 | 242 | 0.024 | |
| purine ribonucleoside triphosphate catabolic process | GO:0009207 | 108 | 0.024 | |
| regionalization | GO:0003002 | 416 | 0.024 | |
| negative regulation of transcription from rna polymerase ii promoter | GO:0000122 | 119 | 0.024 | |
| negative regulation of rna biosynthetic process | GO:1902679 | 240 | 0.024 | |
| immune response | GO:0006955 | 246 | 0.024 | |
| defense response | GO:0006952 | 300 | 0.023 | |
| positive regulation of nitrogen compound metabolic process | GO:0051173 | 354 | 0.023 | |
| cellular nitrogen compound catabolic process | GO:0044270 | 165 | 0.023 | |
| positive regulation of signaling | GO:0023056 | 243 | 0.022 | |
| negative regulation of cellular biosynthetic process | GO:0031327 | 277 | 0.022 | |
| regulation of cell cycle | GO:0051726 | 291 | 0.022 | |
| nucleotide catabolic process | GO:0009166 | 109 | 0.021 | |
| membrane organization | GO:0061024 | 112 | 0.021 | |
| catabolic process | GO:0009056 | 409 | 0.021 | |
| cellular response to dna damage stimulus | GO:0006974 | 223 | 0.021 | |
| death | GO:0016265 | 284 | 0.020 | |
| mitotic dna damage checkpoint | GO:0044773 | 74 | 0.020 | |
| cellular response to organic substance | GO:0071310 | 132 | 0.020 | |
| positive regulation of response to stimulus | GO:0048584 | 323 | 0.020 | |
| imaginal disc derived appendage development | GO:0048737 | 399 | 0.019 | |
| developmental growth | GO:0048589 | 280 | 0.019 | |
| axonogenesis | GO:0007409 | 290 | 0.019 | |
| cell proliferation | GO:0008283 | 299 | 0.019 | |
| response to biotic stimulus | GO:0009607 | 294 | 0.019 | |
| dendrite morphogenesis | GO:0048813 | 199 | 0.018 | |
| body morphogenesis | GO:0010171 | 2 | 0.018 | |
| response to oxygen containing compound | GO:1901700 | 200 | 0.018 | |
| trna transcription from rna polymerase iii promoter | GO:0042797 | 1 | 0.017 | |
| microtubule organizing center organization | GO:0031023 | 168 | 0.017 | |
| head development | GO:0060322 | 135 | 0.017 | |
| positive regulation of rna metabolic process | GO:0051254 | 271 | 0.017 | |
| reproductive system development | GO:0061458 | 74 | 0.017 | |
| protein transport | GO:0015031 | 155 | 0.017 | |
| organic substance catabolic process | GO:1901575 | 308 | 0.017 | |
| cellular macromolecule localization | GO:0070727 | 220 | 0.017 | |
| negative regulation of mitotic cell cycle phase transition | GO:1901991 | 103 | 0.017 | |
| regulation of cell death | GO:0010941 | 173 | 0.016 | |
| protein localization to mitochondrion | GO:0070585 | 1 | 0.016 | |
| protein localization to organelle | GO:0033365 | 82 | 0.016 | |
| response to wounding | GO:0009611 | 94 | 0.016 | |
| forebrain development | GO:0030900 | 2 | 0.015 | |
| centrosome organization | GO:0051297 | 163 | 0.015 | |
| cell adhesion | GO:0007155 | 136 | 0.015 | |
| wing disc morphogenesis | GO:0007472 | 344 | 0.015 | |
| cell cycle checkpoint | GO:0000075 | 95 | 0.014 | |
| immune effector process | GO:0002252 | 98 | 0.014 | |
| mitochondrial transport | GO:0006839 | 8 | 0.014 | |
| establishment of protein localization to organelle | GO:0072594 | 62 | 0.014 | |
| positive regulation of signal transduction | GO:0009967 | 223 | 0.014 | |
| purine nucleotide metabolic process | GO:0006163 | 146 | 0.014 | |
| negative regulation of epithelial cell proliferation | GO:0050680 | 4 | 0.014 | |
| protein localization | GO:0008104 | 284 | 0.014 | |
| positive regulation of transcription dna templated | GO:0045893 | 266 | 0.014 | |
| response to other organism | GO:0051707 | 293 | 0.014 | |
| regulation of nervous system development | GO:0051960 | 248 | 0.014 | |
| camera type eye development | GO:0043010 | 4 | 0.014 | |
| regulation of intracellular signal transduction | GO:1902531 | 236 | 0.014 | |
| anterior posterior pattern specification | GO:0009952 | 136 | 0.013 | |
| intracellular protein transport | GO:0006886 | 104 | 0.013 | |
| nucleoside triphosphate metabolic process | GO:0009141 | 120 | 0.013 | |
| regulation of multicellular organismal development | GO:2000026 | 414 | 0.013 | |
| positive regulation of gene expression | GO:0010628 | 290 | 0.013 | |
| regulation of phosphate metabolic process | GO:0019220 | 210 | 0.013 | |
| cell migration | GO:0016477 | 238 | 0.013 | |
| taxis | GO:0042330 | 304 | 0.013 | |
| positive regulation of neurogenesis | GO:0050769 | 41 | 0.013 | |
| ribonucleotide catabolic process | GO:0009261 | 109 | 0.013 | |
| regulation of small gtpase mediated signal transduction | GO:0051056 | 93 | 0.013 | |
| regulation of transcription from rna polymerase ii promoter | GO:0006357 | 378 | 0.013 | |
| regulation of cell cycle phase transition | GO:1901987 | 130 | 0.013 | |
| negative regulation of cell cycle | GO:0045786 | 116 | 0.013 | |
| embryonic pattern specification | GO:0009880 | 174 | 0.013 | |
| maintenance of location | GO:0051235 | 73 | 0.013 | |
| compound eye photoreceptor cell differentiation | GO:0001751 | 140 | 0.013 | |
| cellular lipid metabolic process | GO:0044255 | 83 | 0.013 | |
| sex differentiation | GO:0007548 | 81 | 0.012 | |
| gland development | GO:0048732 | 191 | 0.012 | |
| cellular protein complex assembly | GO:0043623 | 71 | 0.012 | |
| mitotic dna integrity checkpoint | GO:0044774 | 75 | 0.012 | |
| cellular protein localization | GO:0034613 | 160 | 0.012 | |
| regulation of localization | GO:0032879 | 275 | 0.012 | |
| mitotic cell cycle checkpoint | GO:0007093 | 88 | 0.012 | |
| negative regulation of cellular macromolecule biosynthetic process | GO:2000113 | 267 | 0.012 | |
| axis specification | GO:0009798 | 167 | 0.012 | |
| negative regulation of cell cycle phase transition | GO:1901988 | 103 | 0.011 | |
| cell cycle phase transition | GO:0044770 | 140 | 0.011 | |
| dna integrity checkpoint | GO:0031570 | 81 | 0.011 | |
| g2 dna damage checkpoint | GO:0031572 | 69 | 0.011 | |
| single organism catabolic process | GO:0044712 | 228 | 0.011 | |
| organophosphate catabolic process | GO:0046434 | 112 | 0.011 | |
| purine ribonucleotide metabolic process | GO:0009150 | 145 | 0.011 | |
| positive regulation of macromolecule metabolic process | GO:0010604 | 405 | 0.011 | |
| larval development | GO:0002164 | 104 | 0.011 | |
| carboxylic acid metabolic process | GO:0019752 | 92 | 0.011 | |
| response to lipopolysaccharide | GO:0032496 | 4 | 0.011 | |
| purine containing compound catabolic process | GO:0072523 | 112 | 0.011 | |
| nucleotide metabolic process | GO:0009117 | 161 | 0.011 | |
| purine nucleotide catabolic process | GO:0006195 | 109 | 0.011 | |
| phosphorylation | GO:0016310 | 294 | 0.011 | |
| morphogenesis of an epithelium | GO:0002009 | 276 | 0.011 | |
| organonitrogen compound biosynthetic process | GO:1901566 | 117 | 0.011 | |
| dendrite development | GO:0016358 | 204 | 0.010 | |
| eye photoreceptor cell differentiation | GO:0001754 | 145 | 0.010 | |
| negative regulation of phosphate metabolic process | GO:0045936 | 45 | 0.010 | |
| cellular response to nutrient levels | GO:0031669 | 62 | 0.010 | |
| positive regulation of rna biosynthetic process | GO:1902680 | 266 | 0.010 | |
| regulation of response to stress | GO:0080134 | 200 | 0.010 | |
| organophosphate metabolic process | GO:0019637 | 195 | 0.010 | |
| single organism membrane organization | GO:0044802 | 93 | 0.010 | |
| genitalia development | GO:0048806 | 26 | 0.010 | |
| purine ribonucleoside catabolic process | GO:0046130 | 112 | 0.010 | |
| negative regulation of cellular metabolic process | GO:0031324 | 382 | 0.010 | |
