| protein complex assembly | GO:0006461 | 200 | 0.086 | |
| macromolecular complex assembly | GO:0065003 | 256 | 0.078 | |
| protein modification process | GO:0036211 | 438 | 0.078 | |
| vesicle mediated transport | GO:0016192 | 381 | 0.075 | |
| cellular macromolecular complex assembly | GO:0034622 | 153 | 0.068 | |
| endocytosis | GO:0006897 | 310 | 0.066 | |
| single organism biosynthetic process | GO:0044711 | 206 | 0.061 | |
| protein complex biogenesis | GO:0070271 | 201 | 0.060 | |
| cellular protein modification process | GO:0006464 | 438 | 0.056 | |
| response to abiotic stimulus | GO:0009628 | 341 | 0.053 | |
| regulation of localization | GO:0032879 | 275 | 0.050 | |
| organonitrogen compound metabolic process | GO:1901564 | 318 | 0.050 | |
| negative regulation of cellular metabolic process | GO:0031324 | 382 | 0.047 | |
| oxoacid metabolic process | GO:0043436 | 103 | 0.044 | |
| regionalization | GO:0003002 | 416 | 0.043 | |
| cellular amino acid metabolic process | GO:0006520 | 61 | 0.042 | |
| response to other organism | GO:0051707 | 293 | 0.038 | |
| phosphorylation | GO:0016310 | 294 | 0.037 | |
| carboxylic acid metabolic process | GO:0019752 | 92 | 0.036 | |
| small molecule metabolic process | GO:0044281 | 305 | 0.036 | |
| negative regulation of cellular biosynthetic process | GO:0031327 | 277 | 0.035 | |
| immune system process | GO:0002376 | 347 | 0.034 | |
| death | GO:0016265 | 284 | 0.034 | |
| regulation of cellular protein metabolic process | GO:0032268 | 243 | 0.033 | |
| negative regulation of gene expression | GO:0010629 | 387 | 0.033 | |
| epithelial cell differentiation | GO:0030855 | 322 | 0.032 | |
| regulation of protein metabolic process | GO:0051246 | 256 | 0.031 | |
| regulation of epithelial cell proliferation | GO:0050678 | 4 | 0.031 | |
| negative regulation of biosynthetic process | GO:0009890 | 277 | 0.029 | |
| organic acid metabolic process | GO:0006082 | 103 | 0.029 | |
| response to biotic stimulus | GO:0009607 | 294 | 0.028 | |
| cellular protein complex assembly | GO:0043623 | 71 | 0.028 | |
| cell death | GO:0008219 | 279 | 0.028 | |
| negative regulation of cellular protein metabolic process | GO:0032269 | 85 | 0.027 | |
| positive regulation of biosynthetic process | GO:0009891 | 316 | 0.027 | |
| cellular lipid metabolic process | GO:0044255 | 83 | 0.027 | |
| positive regulation of cellular biosynthetic process | GO:0031328 | 316 | 0.026 | |
| positive regulation of rna metabolic process | GO:0051254 | 271 | 0.026 | |
| body morphogenesis | GO:0010171 | 2 | 0.025 | |
| actin filament based process | GO:0030029 | 220 | 0.025 | |
| mitochondrion organization | GO:0007005 | 65 | 0.024 | |
| oxidation reduction process | GO:0055114 | 123 | 0.024 | |
| amine metabolic process | GO:0009308 | 12 | 0.024 | |
| cell proliferation | GO:0008283 | 299 | 0.024 | |
| regulation of molecular function | GO:0065009 | 217 | 0.024 | |
| phagocytosis | GO:0006909 | 215 | 0.024 | |
| positive regulation of nucleic acid templated transcription | GO:1903508 | 266 | 0.023 | |
| regulation of transport | GO:0051049 | 181 | 0.023 | |
| multi organism behavior | GO:0051705 | 175 | 0.023 | |
| regulation of transcription from rna polymerase ii promoter | GO:0006357 | 378 | 0.023 | |
| neurological system process | GO:0050877 | 358 | 0.023 | |
| response to organic substance | GO:0010033 | 284 | 0.023 | |
| regulation of protein transport | GO:0051223 | 57 | 0.022 | |
| transcription from rna polymerase ii promoter | GO:0006366 | 368 | 0.022 | |
| mitotic nuclear division | GO:0007067 | 213 | 0.022 | |
| response to external biotic stimulus | GO:0043207 | 293 | 0.022 | |
| axis specification | GO:0009798 | 167 | 0.021 | |
| cellular amine metabolic process | GO:0044106 | 12 | 0.020 | |
| regulation of phosphorus metabolic process | GO:0051174 | 210 | 0.020 | |
| regulation of catalytic activity | GO:0050790 | 185 | 0.020 | |
| developmental growth | GO:0048589 | 280 | 0.020 | |
| organic substance catabolic process | GO:1901575 | 308 | 0.020 | |
| regulation of cell cycle | GO:0051726 | 291 | 0.019 | |
| embryo development ending in birth or egg hatching | GO:0009792 | 152 | 0.019 | |
| positive regulation of nucleobase containing compound metabolic process | GO:0045935 | 332 | 0.019 | |
| positive regulation of macromolecule biosynthetic process | GO:0010557 | 283 | 0.019 | |
| protein localization | GO:0008104 | 284 | 0.019 | |
| response to radiation | GO:0009314 | 155 | 0.019 | |
| organic substance transport | GO:0071702 | 257 | 0.019 | |
| positive regulation of transcription from rna polymerase ii promoter | GO:0045944 | 204 | 0.019 | |
| positive regulation of macromolecule metabolic process | GO:0010604 | 405 | 0.019 | |
| regulation of cellular ketone metabolic process | GO:0010565 | 3 | 0.019 | |
| protein phosphorylation | GO:0006468 | 169 | 0.018 | |
| cell cell signaling involved in cell fate commitment | GO:0045168 | 210 | 0.018 | |
| chromosome organization | GO:0051276 | 360 | 0.018 | |
| response to oxygen containing compound | GO:1901700 | 200 | 0.018 | |
| negative regulation of protein metabolic process | GO:0051248 | 85 | 0.018 | |
| innate immune response | GO:0045087 | 144 | 0.018 | |
| lateral inhibition | GO:0046331 | 206 | 0.018 | |
| regulation of phosphate metabolic process | GO:0019220 | 210 | 0.018 | |
| regulation of immune system process | GO:0002682 | 176 | 0.017 | |
| positive regulation of gene expression | GO:0010628 | 290 | 0.017 | |
| regulation of establishment of protein localization | GO:0070201 | 61 | 0.017 | |
| single organism intracellular transport | GO:1902582 | 207 | 0.017 | |
| carbohydrate derivative metabolic process | GO:1901135 | 217 | 0.017 | |
| actin cytoskeleton organization | GO:0030036 | 206 | 0.017 | |
| regulation of cellular catabolic process | GO:0031329 | 157 | 0.017 | |
| positive regulation of rna biosynthetic process | GO:1902680 | 266 | 0.017 | |
| proteolysis | GO:0006508 | 192 | 0.016 | |
| regulation of proteolysis | GO:0030162 | 87 | 0.016 | |
| establishment or maintenance of cell polarity | GO:0007163 | 167 | 0.016 | |
| regulation of protein modification process | GO:0031399 | 112 | 0.016 | |
| cellular macromolecule localization | GO:0070727 | 220 | 0.016 | |
| negative regulation of cellular macromolecule biosynthetic process | GO:2000113 | 267 | 0.016 | |
| regulation of protein localization | GO:0032880 | 76 | 0.015 | |
| establishment of localization in cell | GO:0051649 | 402 | 0.015 | |
| connective tissue development | GO:0061448 | 3 | 0.015 | |
| reproductive behavior | GO:0019098 | 122 | 0.015 | |
| eye development | GO:0001654 | 323 | 0.015 | |
| regulation of developmental growth | GO:0048638 | 174 | 0.015 | |
| regulation of programmed cell death | GO:0043067 | 152 | 0.015 | |
| lipid metabolic process | GO:0006629 | 121 | 0.015 | |
| regulation of cell differentiation | GO:0045595 | 302 | 0.015 | |
| positive regulation of transport | GO:0051050 | 92 | 0.015 | |
| secretion by cell | GO:0032940 | 101 | 0.015 | |
| regulation of phosphorylation | GO:0042325 | 147 | 0.015 | |
| oocyte differentiation | GO:0009994 | 145 | 0.014 | |
| regulation of anatomical structure morphogenesis | GO:0022603 | 242 | 0.014 | |
| lipid biosynthetic process | GO:0008610 | 46 | 0.014 | |
| protein maturation | GO:0051604 | 71 | 0.014 | |
| immune response | GO:0006955 | 246 | 0.014 | |
| apoptotic process | GO:0006915 | 159 | 0.014 | |
| organonitrogen compound biosynthetic process | GO:1901566 | 117 | 0.014 | |
| negative regulation of macromolecule biosynthetic process | GO:0010558 | 270 | 0.014 | |
| positive regulation of nitrogen compound metabolic process | GO:0051173 | 354 | 0.014 | |
| regulation of cellular amine metabolic process | GO:0033238 | 3 | 0.014 | |
| appendage morphogenesis | GO:0035107 | 397 | 0.014 | |
| negative regulation of nucleic acid templated transcription | GO:1903507 | 240 | 0.014 | |
| regulation of mitotic cell cycle | GO:0007346 | 190 | 0.013 | |
| positive regulation of transcription dna templated | GO:0045893 | 266 | 0.013 | |
| positive regulation of developmental process | GO:0051094 | 143 | 0.013 | |
| protein ubiquitination | GO:0016567 | 70 | 0.013 | |
| compound eye morphogenesis | GO:0001745 | 249 | 0.013 | |
| tissue morphogenesis | GO:0048729 | 297 | 0.013 | |
| establishment of protein localization | GO:0045184 | 163 | 0.013 | |
| regulation of cell death | GO:0010941 | 173 | 0.013 | |
| regulation of multicellular organismal development | GO:2000026 | 414 | 0.013 | |
| negative regulation of nucleobase containing compound metabolic process | GO:0045934 | 261 | 0.013 | |
| catabolic process | GO:0009056 | 409 | 0.013 | |
| eye pigmentation | GO:0048069 | 43 | 0.013 | |
| regulation of catabolic process | GO:0009894 | 170 | 0.013 | |
| negative regulation of cellular component organization | GO:0051129 | 108 | 0.013 | |
| glycoprotein metabolic process | GO:0009100 | 41 | 0.013 | |
| imaginal disc derived appendage development | GO:0048737 | 399 | 0.013 | |
| response to heat | GO:0009408 | 63 | 0.012 | |
| regulation of steroid metabolic process | GO:0019218 | 2 | 0.012 | |
| regulation of notch signaling pathway | GO:0008593 | 100 | 0.012 | |
| regulation of growth | GO:0040008 | 233 | 0.012 | |
| organelle assembly | GO:0070925 | 198 | 0.012 | |
| positive regulation of signal transduction | GO:0009967 | 223 | 0.012 | |
| intracellular signal transduction | GO:0035556 | 300 | 0.012 | |
| small molecule biosynthetic process | GO:0044283 | 37 | 0.012 | |
| secretion | GO:0046903 | 109 | 0.012 | |
| photoreceptor cell differentiation | GO:0046530 | 170 | 0.012 | |
| regulation of cellular component biogenesis | GO:0044087 | 201 | 0.012 | |
| regulation of apoptotic process | GO:0042981 | 130 | 0.012 | |
| negative regulation of organelle organization | GO:0010639 | 56 | 0.012 | |
| negative regulation of programmed cell death | GO:0043069 | 72 | 0.012 | |
| protein processing | GO:0016485 | 68 | 0.012 | |
| response to lipopolysaccharide | GO:0032496 | 4 | 0.012 | |
| organophosphate metabolic process | GO:0019637 | 195 | 0.012 | |
| adult behavior | GO:0030534 | 137 | 0.012 | |
| gland development | GO:0048732 | 191 | 0.012 | |
| programmed cell death | GO:0012501 | 257 | 0.012 | |
| defense response to bacterium | GO:0042742 | 178 | 0.012 | |
| single organism cellular localization | GO:1902580 | 180 | 0.011 | |
| ovarian follicle cell development | GO:0030707 | 248 | 0.011 | |
| protein modification by small protein conjugation or removal | GO:0070647 | 106 | 0.011 | |
| positive regulation of multicellular organismal process | GO:0051240 | 143 | 0.011 | |
| protein polymerization | GO:0051258 | 42 | 0.011 | |
| positive regulation of response to stimulus | GO:0048584 | 323 | 0.011 | |
| chromatin organization | GO:0006325 | 207 | 0.011 | |
| regulation of cellular localization | GO:0060341 | 136 | 0.011 | |
| cell division | GO:0051301 | 248 | 0.011 | |
| cell migration | GO:0016477 | 238 | 0.011 | |
| oocyte axis specification | GO:0007309 | 108 | 0.011 | |
| negative regulation of apoptotic process | GO:0043066 | 63 | 0.011 | |
| dorsal ventral pattern formation | GO:0009953 | 133 | 0.011 | |
| cellular protein localization | GO:0034613 | 160 | 0.011 | |
| maternal determination of anterior posterior axis embryo | GO:0008358 | 74 | 0.011 | |
| regulation of intracellular signal transduction | GO:1902531 | 236 | 0.011 | |
| pigmentation | GO:0043473 | 75 | 0.011 | |
| regulation of organelle organization | GO:0033043 | 196 | 0.011 | |
| jak stat cascade | GO:0007259 | 49 | 0.011 | |
| single organism carbohydrate metabolic process | GO:0044723 | 72 | 0.011 | |
| oocyte development | GO:0048599 | 124 | 0.011 | |
| positive regulation of molecular function | GO:0044093 | 136 | 0.011 | |
| positive regulation of signaling | GO:0023056 | 243 | 0.011 | |
| negative regulation of nitrogen compound metabolic process | GO:0051172 | 265 | 0.010 | |
| cytokinesis | GO:0000910 | 90 | 0.010 | |
| segmentation | GO:0035282 | 207 | 0.010 | |
| peptidyl amino acid modification | GO:0018193 | 105 | 0.010 | |
| transmembrane transport | GO:0055085 | 139 | 0.010 | |
