| chromosome organization | GO:0051276 | 360 | 0.220 | |
| chromatin organization | GO:0006325 | 207 | 0.121 | |
| dna conformation change | GO:0071103 | 105 | 0.100 | |
| cellular protein modification process | GO:0006464 | 438 | 0.083 | |
| establishment of localization in cell | GO:0051649 | 402 | 0.081 | |
| meiotic nuclear division | GO:0007126 | 151 | 0.071 | |
| rna splicing | GO:0008380 | 83 | 0.063 | |
| protein dna complex assembly | GO:0065004 | 63 | 0.056 | |
| single organism intracellular transport | GO:1902582 | 207 | 0.051 | |
| cell division | GO:0051301 | 248 | 0.051 | |
| chromatin assembly | GO:0031497 | 48 | 0.050 | |
| dna metabolic process | GO:0006259 | 227 | 0.049 | |
| organic substance transport | GO:0071702 | 257 | 0.044 | |
| negative regulation of gene expression | GO:0010629 | 387 | 0.042 | |
| regulation of cellular ketone metabolic process | GO:0010565 | 3 | 0.041 | |
| negative regulation of nitrogen compound metabolic process | GO:0051172 | 265 | 0.040 | |
| organic acid metabolic process | GO:0006082 | 103 | 0.039 | |
| meiotic cell cycle | GO:0051321 | 171 | 0.038 | |
| vesicle mediated transport | GO:0016192 | 381 | 0.037 | |
| regulation of cell cycle | GO:0051726 | 291 | 0.035 | |
| protein modification process | GO:0036211 | 438 | 0.035 | |
| nucleosome organization | GO:0034728 | 59 | 0.034 | |
| cellular protein localization | GO:0034613 | 160 | 0.033 | |
| negative regulation of nucleic acid templated transcription | GO:1903507 | 240 | 0.033 | |
| regionalization | GO:0003002 | 416 | 0.032 | |
| organonitrogen compound metabolic process | GO:1901564 | 318 | 0.031 | |
| transcription from rna polymerase ii promoter | GO:0006366 | 368 | 0.028 | |
| regulation of cellular amine metabolic process | GO:0033238 | 3 | 0.028 | |
| protein localization | GO:0008104 | 284 | 0.027 | |
| cytoplasmic transport | GO:0016482 | 130 | 0.026 | |
| negative regulation of nucleobase containing compound metabolic process | GO:0045934 | 261 | 0.025 | |
| protein dna complex subunit organization | GO:0071824 | 86 | 0.025 | |
| nucleosome assembly | GO:0006334 | 35 | 0.023 | |
| rna splicing via transesterification reactions with bulged adenosine as nucleophile | GO:0000377 | 73 | 0.023 | |
| positive regulation of macromolecule metabolic process | GO:0010604 | 405 | 0.023 | |
| endocytosis | GO:0006897 | 310 | 0.023 | |
| intracellular transport | GO:0046907 | 228 | 0.022 | |
| small molecule metabolic process | GO:0044281 | 305 | 0.022 | |
| regulation of cellular amino acid metabolic process | GO:0006521 | 0 | 0.022 | |
| negative regulation of cellular metabolic process | GO:0031324 | 382 | 0.022 | |
| amine metabolic process | GO:0009308 | 12 | 0.022 | |
| response to abiotic stimulus | GO:0009628 | 341 | 0.021 | |
| regulation of transcription from rna polymerase ii promoter | GO:0006357 | 378 | 0.021 | |
| rna splicing via transesterification reactions | GO:0000375 | 73 | 0.021 | |
| cytokinesis | GO:0000910 | 90 | 0.021 | |
| gland development | GO:0048732 | 191 | 0.020 | |
| organelle fission | GO:0048285 | 340 | 0.020 | |
| microtubule organizing center organization | GO:0031023 | 168 | 0.020 | |
| negative regulation of cellular biosynthetic process | GO:0031327 | 277 | 0.020 | |
| dna packaging | GO:0006323 | 91 | 0.020 | |
| response to organic substance | GO:0010033 | 284 | 0.019 | |
| positive regulation of protein metabolic process | GO:0051247 | 128 | 0.019 | |
| organonitrogen compound biosynthetic process | GO:1901566 | 117 | 0.019 | |
| negative regulation of rna metabolic process | GO:0051253 | 251 | 0.019 | |
| anatomical structure homeostasis | GO:0060249 | 97 | 0.019 | |
| cellular macromolecular complex assembly | GO:0034622 | 153 | 0.019 | |
| chromatin modification | GO:0016568 | 147 | 0.018 | |
| intracellular protein transport | GO:0006886 | 104 | 0.018 | |
| synaptic transmission | GO:0007268 | 288 | 0.018 | |
| regulation of cell cycle process | GO:0010564 | 181 | 0.018 | |
| rna processing | GO:0006396 | 147 | 0.018 | |
| meiotic cell cycle process | GO:1903046 | 132 | 0.018 | |
| nitrogen compound transport | GO:0071705 | 85 | 0.018 | |
| blastoderm segmentation | GO:0007350 | 159 | 0.018 | |
| homeostatic process | GO:0042592 | 199 | 0.018 | |
| regulation of epithelial cell proliferation | GO:0050678 | 4 | 0.018 | |
| cellular response to chemical stimulus | GO:0070887 | 199 | 0.018 | |
| larval development | GO:0002164 | 104 | 0.017 | |
| golgi organization | GO:0007030 | 66 | 0.017 | |
| positive regulation of response to stimulus | GO:0048584 | 323 | 0.017 | |
| negative regulation of signaling | GO:0023057 | 219 | 0.017 | |
| protein modification by small protein conjugation or removal | GO:0070647 | 106 | 0.017 | |
| negative regulation of cell communication | GO:0010648 | 223 | 0.017 | |
| cellular ketone metabolic process | GO:0042180 | 24 | 0.017 | |
| centrosome organization | GO:0051297 | 163 | 0.016 | |
| negative regulation of cellular macromolecule biosynthetic process | GO:2000113 | 267 | 0.016 | |
| regulation of protein metabolic process | GO:0051246 | 256 | 0.016 | |
| spermatogenesis | GO:0007283 | 200 | 0.016 | |
| single organism cellular localization | GO:1902580 | 180 | 0.016 | |
| endomembrane system organization | GO:0010256 | 119 | 0.016 | |
| cellular response to dna damage stimulus | GO:0006974 | 223 | 0.016 | |
| regulation of multicellular organismal development | GO:2000026 | 414 | 0.015 | |
| single organism biosynthetic process | GO:0044711 | 206 | 0.015 | |
| cellular amine metabolic process | GO:0044106 | 12 | 0.015 | |
| epithelial cell differentiation | GO:0030855 | 322 | 0.015 | |
| neurological system process | GO:0050877 | 358 | 0.015 | |
| regulation of programmed cell death | GO:0043067 | 152 | 0.015 | |
| regulation of apoptotic process | GO:0042981 | 130 | 0.015 | |
| positive regulation of cellular biosynthetic process | GO:0031328 | 316 | 0.014 | |
| central nervous system development | GO:0007417 | 201 | 0.014 | |
| regulation of cellular localization | GO:0060341 | 136 | 0.014 | |
| cellular amino acid metabolic process | GO:0006520 | 61 | 0.014 | |
| mrna processing | GO:0006397 | 104 | 0.014 | |
| eye development | GO:0001654 | 323 | 0.014 | |
| developmental growth | GO:0048589 | 280 | 0.013 | |
| sensory organ morphogenesis | GO:0090596 | 260 | 0.013 | |
| columnar cuboidal epithelial cell development | GO:0002066 | 249 | 0.013 | |
| oxoacid metabolic process | GO:0043436 | 103 | 0.013 | |
| dendrite morphogenesis | GO:0048813 | 199 | 0.013 | |
| synapse organization | GO:0050808 | 196 | 0.013 | |
| positive regulation of cell communication | GO:0010647 | 250 | 0.013 | |
| regulation of protein modification process | GO:0031399 | 112 | 0.013 | |
| negative regulation of biosynthetic process | GO:0009890 | 277 | 0.013 | |
| embryo development ending in birth or egg hatching | GO:0009792 | 152 | 0.013 | |
| regulation of cell proliferation | GO:0042127 | 163 | 0.013 | |
| dendrite development | GO:0016358 | 204 | 0.013 | |
| negative regulation of signal transduction | GO:0009968 | 206 | 0.013 | |
| response to biotic stimulus | GO:0009607 | 294 | 0.012 | |
| regulation of protein localization | GO:0032880 | 76 | 0.012 | |
| response to other organism | GO:0051707 | 293 | 0.012 | |
| regulation of dna metabolic process | GO:0051052 | 34 | 0.012 | |
| cell death | GO:0008219 | 279 | 0.012 | |
| heart process | GO:0003015 | 37 | 0.012 | |
| carboxylic acid metabolic process | GO:0019752 | 92 | 0.012 | |
| protein complex biogenesis | GO:0070271 | 201 | 0.012 | |
| death | GO:0016265 | 284 | 0.012 | |
| ras protein signal transduction | GO:0007265 | 88 | 0.012 | |
| negative regulation of rna biosynthetic process | GO:1902679 | 240 | 0.012 | |
| cell migration | GO:0016477 | 238 | 0.012 | |
| regulation of cell death | GO:0010941 | 173 | 0.012 | |
| catabolic process | GO:0009056 | 409 | 0.011 | |
| response to external biotic stimulus | GO:0043207 | 293 | 0.011 | |
| positive regulation of cellular amine metabolic process | GO:0033240 | 0 | 0.011 | |
| cell proliferation | GO:0008283 | 299 | 0.011 | |
| single organism carbohydrate metabolic process | GO:0044723 | 72 | 0.011 | |
| macromolecular complex assembly | GO:0065003 | 256 | 0.011 | |
| phosphorylation | GO:0016310 | 294 | 0.011 | |
| ovarian nurse cell to oocyte transport | GO:0007300 | 27 | 0.011 | |
| protein catabolic process | GO:0030163 | 101 | 0.011 | |
| regulation of catalytic activity | GO:0050790 | 185 | 0.011 | |
| organic substance catabolic process | GO:1901575 | 308 | 0.011 | |
| cellular macromolecule catabolic process | GO:0044265 | 136 | 0.011 | |
| cellular homeostasis | GO:0019725 | 80 | 0.011 | |
| negative regulation of microtubule polymerization or depolymerization | GO:0031111 | 21 | 0.011 | |
| regulation of notch signaling pathway | GO:0008593 | 100 | 0.011 | |
| male gamete generation | GO:0048232 | 201 | 0.010 | |
| positive regulation of cellular amino acid metabolic process | GO:0045764 | 0 | 0.010 | |
| positive regulation of cellular protein metabolic process | GO:0032270 | 118 | 0.010 | |
| positive regulation of catalytic activity | GO:0043085 | 118 | 0.010 | |
| positive regulation of nucleobase containing compound metabolic process | GO:0045935 | 332 | 0.010 | |
| camera type eye development | GO:0043010 | 4 | 0.010 | |
| segmentation | GO:0035282 | 207 | 0.010 | |
| growth | GO:0040007 | 359 | 0.010 | |
| carbohydrate derivative biosynthetic process | GO:1901137 | 85 | 0.010 | |