| blastoderm segmentation | GO:0007350 | 159 | 0.522 | |
| mrna metabolic process | GO:0016071 | 124 | 0.478 | |
| mitotic nuclear division | GO:0007067 | 213 | 0.468 | |
| posttranscriptional gene silencing | GO:0016441 | 46 | 0.467 | |
| negative regulation of cell cycle | GO:0045786 | 116 | 0.447 | |
| negative regulation of cellular biosynthetic process | GO:0031327 | 277 | 0.445 | |
| negative regulation of gene expression | GO:0010629 | 387 | 0.442 | |
| negative regulation of cellular metabolic process | GO:0031324 | 382 | 0.410 | |
| regulation of cellular component biogenesis | GO:0044087 | 201 | 0.406 | |
| negative regulation of nitrogen compound metabolic process | GO:0051172 | 265 | 0.393 | |
| regulation of gene expression epigenetic | GO:0040029 | 128 | 0.387 | |
| regionalization | GO:0003002 | 416 | 0.373 | |
| gene silencing | GO:0016458 | 138 | 0.261 | |
| regulation of translation | GO:0006417 | 56 | 0.192 | |
| negative regulation of cell cycle process | GO:0010948 | 109 | 0.189 | |
| regulation of cellular protein metabolic process | GO:0032268 | 243 | 0.188 | |
| death | GO:0016265 | 284 | 0.182 | |
| oocyte development | GO:0048599 | 124 | 0.165 | |
| negative regulation of cell cycle phase transition | GO:1901988 | 103 | 0.163 | |
| regulation of mitotic cell cycle phase transition | GO:1901990 | 130 | 0.155 | |
| transcription from rna polymerase ii promoter | GO:0006366 | 368 | 0.147 | |
| cellular catabolic process | GO:0044248 | 372 | 0.146 | |
| negative regulation of mitotic cell cycle phase transition | GO:1901991 | 103 | 0.144 | |
| actin filament based process | GO:0030029 | 220 | 0.139 | |
| regulation of mrna processing | GO:0050684 | 71 | 0.138 | |
| regulation of cell cycle | GO:0051726 | 291 | 0.138 | |
| regulation of protein metabolic process | GO:0051246 | 256 | 0.131 | |
| mrna processing | GO:0006397 | 104 | 0.129 | |
| columnar cuboidal epithelial cell differentiation | GO:0002065 | 256 | 0.128 | |
| segmentation | GO:0035282 | 207 | 0.126 | |
| epithelial cell development | GO:0002064 | 274 | 0.116 | |
| anterior posterior axis specification embryo | GO:0008595 | 103 | 0.113 | |
| cellular component assembly involved in morphogenesis | GO:0010927 | 151 | 0.109 | |
| gene silencing by rna | GO:0031047 | 57 | 0.105 | |
| mitotic g2 m transition checkpoint | GO:0044818 | 70 | 0.101 | |
| cellular protein modification process | GO:0006464 | 438 | 0.099 | |
| catabolic process | GO:0009056 | 409 | 0.099 | |
| rna localization | GO:0006403 | 115 | 0.098 | |
| posttranscriptional regulation of gene expression | GO:0010608 | 145 | 0.092 | |
| actin cytoskeleton organization | GO:0030036 | 206 | 0.092 | |
| larval development | GO:0002164 | 104 | 0.091 | |
| negative regulation of nucleobase containing compound metabolic process | GO:0045934 | 261 | 0.088 | |
| establishment of localization in cell | GO:0051649 | 402 | 0.087 | |
| embryonic pattern specification | GO:0009880 | 174 | 0.087 | |
| protein localization | GO:0008104 | 284 | 0.082 | |
| protein modification process | GO:0036211 | 438 | 0.081 | |
| negative regulation of biosynthetic process | GO:0009890 | 277 | 0.081 | |
| axis specification | GO:0009798 | 167 | 0.080 | |
| atp metabolic process | GO:0046034 | 49 | 0.080 | |
| ribonucleoside monophosphate catabolic process | GO:0009158 | 39 | 0.078 | |
| chromosome organization | GO:0051276 | 360 | 0.077 | |
| protein phosphorylation | GO:0006468 | 169 | 0.076 | |
| nucleoside monophosphate metabolic process | GO:0009123 | 52 | 0.076 | |
| negative regulation of cellular protein metabolic process | GO:0032269 | 85 | 0.075 | |
| dorsal ventral pattern formation | GO:0009953 | 133 | 0.074 | |
| embryonic axis specification | GO:0000578 | 107 | 0.074 | |
| organelle assembly | GO:0070925 | 198 | 0.073 | |
| establishment or maintenance of cell polarity | GO:0007163 | 167 | 0.073 | |
| oocyte differentiation | GO:0009994 | 145 | 0.072 | |
| mrna splicing via spliceosome | GO:0000398 | 73 | 0.069 | |
| positive regulation of gene expression | GO:0010628 | 290 | 0.069 | |
| muscle structure development | GO:0061061 | 224 | 0.068 | |
| rna splicing | GO:0008380 | 83 | 0.067 | |
| regulation of cell cycle process | GO:0010564 | 181 | 0.065 | |
| negative regulation of cellular macromolecule biosynthetic process | GO:2000113 | 267 | 0.065 | |
| cellular macromolecule catabolic process | GO:0044265 | 136 | 0.065 | |
| regulation of apoptotic process | GO:0042981 | 130 | 0.063 | |
| regulation of cell cycle phase transition | GO:1901987 | 130 | 0.063 | |
| macromolecule catabolic process | GO:0009057 | 161 | 0.063 | |
| cellular macromolecule localization | GO:0070727 | 220 | 0.062 | |
| cell motility | GO:0048870 | 251 | 0.061 | |
| phosphorylation | GO:0016310 | 294 | 0.060 | |
| negative regulation of developmental process | GO:0051093 | 201 | 0.059 | |
| stem cell maintenance | GO:0019827 | 67 | 0.058 | |
| regulation of double strand break repair | GO:2000779 | 3 | 0.057 | |
| regulation of immune response | GO:0050776 | 118 | 0.057 | |
| developmental maturation | GO:0021700 | 172 | 0.057 | |
| anterior posterior pattern specification | GO:0009952 | 136 | 0.056 | |
| negative regulation of transcription dna templated | GO:0045892 | 237 | 0.055 | |
| negative regulation of rna biosynthetic process | GO:1902679 | 240 | 0.055 | |
| oocyte axis specification | GO:0007309 | 108 | 0.055 | |
| regulation of programmed cell death | GO:0043067 | 152 | 0.055 | |
| response to bacterium | GO:0009617 | 198 | 0.053 | |
| positive regulation of translation | GO:0045727 | 12 | 0.052 | |
| regulation of cell differentiation | GO:0045595 | 302 | 0.051 | |
| response to biotic stimulus | GO:0009607 | 294 | 0.051 | |
| embryo development ending in birth or egg hatching | GO:0009792 | 152 | 0.050 | |
| pole plasm oskar mrna localization | GO:0045451 | 46 | 0.050 | |
| rna processing | GO:0006396 | 147 | 0.049 | |
| response to external biotic stimulus | GO:0043207 | 293 | 0.049 | |
| response to abiotic stimulus | GO:0009628 | 341 | 0.049 | |
| positive regulation of rna metabolic process | GO:0051254 | 271 | 0.049 | |
| purine nucleoside monophosphate catabolic process | GO:0009128 | 38 | 0.049 | |
| epithelial cell differentiation | GO:0030855 | 322 | 0.048 | |
| camera type eye development | GO:0043010 | 4 | 0.048 | |
| defense response to other organism | GO:0098542 | 225 | 0.047 | |
| retina development in camera type eye | GO:0060041 | 4 | 0.045 | |
| response to other organism | GO:0051707 | 293 | 0.045 | |
| body morphogenesis | GO:0010171 | 2 | 0.045 | |
| negative regulation of translation | GO:0017148 | 28 | 0.044 | |
| negative regulation of protein metabolic process | GO:0051248 | 85 | 0.044 | |
| oocyte construction | GO:0007308 | 112 | 0.043 | |
| oocyte anterior posterior axis specification | GO:0007314 | 72 | 0.043 | |
| positive regulation of catabolic process | GO:0009896 | 105 | 0.042 | |
| defense response to fungus | GO:0050832 | 48 | 0.042 | |
| spermatogenesis | GO:0007283 | 200 | 0.042 | |
| columnar cuboidal epithelial cell development | GO:0002066 | 249 | 0.042 | |
| negative regulation of multicellular organismal process | GO:0051241 | 142 | 0.042 | |
| cell maturation | GO:0048469 | 144 | 0.042 | |
| cell death | GO:0008219 | 279 | 0.041 | |
| regulation of epithelial cell proliferation | GO:0050678 | 4 | 0.040 | |
| dorsal appendage formation | GO:0046843 | 47 | 0.040 | |
| regulation of mitotic cell cycle | GO:0007346 | 190 | 0.039 | |
| positive regulation of macromolecule biosynthetic process | GO:0010557 | 283 | 0.039 | |
| defense response to bacterium | GO:0042742 | 178 | 0.039 | |
| stem cell development | GO:0048864 | 79 | 0.039 | |
| pole plasm mrna localization | GO:0019094 | 49 | 0.038 | |
| regulation of response to stress | GO:0080134 | 200 | 0.038 | |
| pole plasm assembly | GO:0007315 | 61 | 0.038 | |
| lipid storage | GO:0019915 | 38 | 0.037 | |
| pole plasm protein localization | GO:0007318 | 10 | 0.037 | |
| rna catabolic process | GO:0006401 | 37 | 0.036 | |
| intracellular signal transduction | GO:0035556 | 300 | 0.035 | |
| carbohydrate derivative metabolic process | GO:1901135 | 217 | 0.035 | |
| positive regulation of transcription dna templated | GO:0045893 | 266 | 0.035 | |
| post embryonic appendage morphogenesis | GO:0035120 | 385 | 0.034 | |
| regulation of localization | GO:0032879 | 275 | 0.034 | |
| regulation of phosphorus metabolic process | GO:0051174 | 210 | 0.034 | |
| ribonucleoside monophosphate metabolic process | GO:0009161 | 51 | 0.034 | |
| cell cycle phase transition | GO:0044770 | 140 | 0.033 | |
| nuclear division | GO:0000280 | 332 | 0.032 | |
| regulation of pole plasm oskar mrna localization | GO:0007317 | 27 | 0.032 | |
| posttranscriptional gene silencing by rna | GO:0035194 | 45 | 0.031 | |
| carbohydrate derivative catabolic process | GO:1901136 | 118 | 0.031 | |
| intracellular mrna localization involved in pattern specification process | GO:0060810 | 56 | 0.031 | |
| regulation of immune system process | GO:0002682 | 176 | 0.031 | |
| cell division | GO:0051301 | 248 | 0.031 | |
| regulation of cell death | GO:0010941 | 173 | 0.030 | |
| regulation of phosphate metabolic process | GO:0019220 | 210 | 0.030 | |
| negative regulation of cell communication | GO:0010648 | 223 | 0.030 | |
| intracellular mrna localization | GO:0008298 | 66 | 0.029 | |
| stem cell differentiation | GO:0048863 | 117 | 0.029 | |
| regulation of mrna splicing via spliceosome | GO:0048024 | 64 | 0.029 | |
| actin filament organization | GO:0007015 | 126 | 0.028 | |
| transmembrane receptor protein serine threonine kinase signaling pathway | GO:0007178 | 65 | 0.028 | |
| localization of cell | GO:0051674 | 257 | 0.027 | |
| translation | GO:0006412 | 69 | 0.027 | |
| germ line stem cell maintenance | GO:0030718 | 50 | 0.027 | |
| response to radiation | GO:0009314 | 155 | 0.027 | |
| mitotic cell cycle checkpoint | GO:0007093 | 88 | 0.027 | |
| cellular response to chemical stimulus | GO:0070887 | 199 | 0.027 | |
| purine ribonucleoside monophosphate catabolic process | GO:0009169 | 38 | 0.027 | |
| enzyme linked receptor protein signaling pathway | GO:0007167 | 179 | 0.026 | |
| anterior posterior axis specification | GO:0009948 | 109 | 0.026 | |
| cellular response to organic substance | GO:0071310 | 132 | 0.026 | |
| imaginal disc derived appendage morphogenesis | GO:0035114 | 395 | 0.026 | |
| determination of adult lifespan | GO:0008340 | 137 | 0.026 | |
| synapse organization | GO:0050808 | 196 | 0.025 | |
| epithelial cell migration | GO:0010631 | 148 | 0.025 | |
| wing disc pattern formation | GO:0035222 | 66 | 0.024 | |
| regulation of cellular response to stress | GO:0080135 | 89 | 0.024 | |
| regulation of gene silencing | GO:0060968 | 63 | 0.024 | |
| double strand break repair | GO:0006302 | 26 | 0.024 | |
| humoral immune response | GO:0006959 | 117 | 0.024 | |
| protein complex biogenesis | GO:0070271 | 201 | 0.024 | |
| apoptotic process | GO:0006915 | 159 | 0.023 | |
| rna splicing via transesterification reactions | GO:0000375 | 73 | 0.023 | |
| regulation of phosphorylation | GO:0042325 | 147 | 0.022 | |
| imaginal disc derived appendage development | GO:0048737 | 399 | 0.022 | |
| organelle fission | GO:0048285 | 340 | 0.022 | |
| regulation of oocyte development | GO:0060281 | 27 | 0.022 | |
| heterocycle catabolic process | GO:0046700 | 166 | 0.022 | |
| response to dsrna | GO:0043331 | 15 | 0.022 | |
| eggshell formation | GO:0030703 | 105 | 0.021 | |
| tripartite regional subdivision | GO:0007351 | 103 | 0.021 | |
| regulation of mrna metabolic process | GO:1903311 | 72 | 0.021 | |
| cell proliferation | GO:0008283 | 299 | 0.021 | |
| organic substance catabolic process | GO:1901575 | 308 | 0.021 | |
| cytoplasm organization | GO:0007028 | 64 | 0.020 | |
| nucleoside monophosphate catabolic process | GO:0009125 | 39 | 0.020 | |
| digestive system development | GO:0055123 | 149 | 0.020 | |
| regulation of alternative mrna splicing via spliceosome | GO:0000381 | 60 | 0.020 | |
| macroautophagy | GO:0016236 | 42 | 0.019 | |
| response to starvation | GO:0042594 | 97 | 0.019 | |
| negative regulation of programmed cell death | GO:0043069 | 72 | 0.019 | |
| forebrain development | GO:0030900 | 2 | 0.019 | |
| negative regulation of cell death | GO:0060548 | 81 | 0.018 | |
| regulation of synapse structure and activity | GO:0050803 | 128 | 0.018 | |
| proteolysis involved in cellular protein catabolic process | GO:0051603 | 83 | 0.018 | |
| programmed cell death | GO:0012501 | 257 | 0.018 | |
| mitotic cell cycle phase transition | GO:0044772 | 138 | 0.018 | |
| regulation of rna splicing | GO:0043484 | 69 | 0.018 | |
| nephron development | GO:0072006 | 3 | 0.018 | |
| positive regulation of protein metabolic process | GO:0051247 | 128 | 0.018 | |
| learning or memory | GO:0007611 | 141 | 0.018 | |
| negative regulation of cell proliferation | GO:0008285 | 69 | 0.018 | |
| purine ribonucleotide metabolic process | GO:0009150 | 145 | 0.018 | |
| rna splicing via transesterification reactions with bulged adenosine as nucleophile | GO:0000377 | 73 | 0.017 | |
| non recombinational repair | GO:0000726 | 7 | 0.017 | |
| immune response | GO:0006955 | 246 | 0.017 | |
| oocyte maturation | GO:0001556 | 3 | 0.017 | |
| positive regulation of nucleic acid templated transcription | GO:1903508 | 266 | 0.016 | |
| negative regulation of rna metabolic process | GO:0051253 | 251 | 0.016 | |
| small gtpase mediated signal transduction | GO:0007264 | 88 | 0.016 | |
| central nervous system development | GO:0007417 | 201 | 0.016 | |
| response to oxygen containing compound | GO:1901700 | 200 | 0.016 | |
| nucleoside metabolic process | GO:0009116 | 127 | 0.016 | |
| dendrite morphogenesis | GO:0048813 | 199 | 0.016 | |
| purine nucleoside monophosphate metabolic process | GO:0009126 | 50 | 0.015 | |
| intracellular transport | GO:0046907 | 228 | 0.015 | |
| cell migration | GO:0016477 | 238 | 0.015 | |
| single organism behavior | GO:0044708 | 391 | 0.015 | |
| regulation of membrane potential | GO:0042391 | 35 | 0.015 | |
| rna transport | GO:0050658 | 46 | 0.015 | |
| positive regulation of response to stimulus | GO:0048584 | 323 | 0.015 | |
| nitrogen compound transport | GO:0071705 | 85 | 0.015 | |
| response to extracellular stimulus | GO:0009991 | 116 | 0.015 | |
| negative regulation of gene expression epigenetic | GO:0045814 | 77 | 0.015 | |
| multicellular organismal aging | GO:0010259 | 140 | 0.015 | |
| aromatic compound catabolic process | GO:0019439 | 166 | 0.014 | |
| carbohydrate metabolic process | GO:0005975 | 82 | 0.014 | |
| regulation of cell maturation | GO:1903429 | 27 | 0.014 | |
| nucleotide metabolic process | GO:0009117 | 161 | 0.014 | |
| female germ line stem cell maintenance | GO:0036099 | 8 | 0.014 | |
| regulation of embryonic pattern specification | GO:1902875 | 27 | 0.014 | |
| germarium derived egg chamber formation | GO:0007293 | 101 | 0.014 | |
| response to organic substance | GO:0010033 | 284 | 0.014 | |
| maintenance of location | GO:0051235 | 73 | 0.014 | |
| lipid localization | GO:0010876 | 54 | 0.013 | |
| mrna catabolic process | GO:0006402 | 33 | 0.013 | |
| gene silencing by mirna | GO:0035195 | 22 | 0.013 | |
| endocytosis | GO:0006897 | 310 | 0.013 | |
| negative regulation of response to stimulus | GO:0048585 | 258 | 0.013 | |
| aging | GO:0007568 | 143 | 0.013 | |
| response to heat | GO:0009408 | 63 | 0.013 | |
| regulation of synapse organization | GO:0050807 | 110 | 0.013 | |
| response to alcohol | GO:0097305 | 95 | 0.013 | |
| ameboidal type cell migration | GO:0001667 | 151 | 0.013 | |
| maternal determination of anterior posterior axis embryo | GO:0008358 | 74 | 0.013 | |
| negative regulation of mitotic cell cycle | GO:0045930 | 109 | 0.013 | |
| regulation of cell division | GO:0051302 | 72 | 0.013 | |
| negative regulation of autophagy | GO:0010507 | 16 | 0.012 | |
| positive regulation of mapk cascade | GO:0043410 | 63 | 0.012 | |
| negative regulation of macromolecule biosynthetic process | GO:0010558 | 270 | 0.012 | |
| negative regulation of cell differentiation | GO:0045596 | 143 | 0.012 | |
| positive regulation of nucleobase containing compound metabolic process | GO:0045935 | 332 | 0.012 | |
| defense response | GO:0006952 | 300 | 0.012 | |
| urogenital system development | GO:0001655 | 72 | 0.012 | |
| macromolecular complex assembly | GO:0065003 | 256 | 0.012 | |
| dna integrity checkpoint | GO:0031570 | 81 | 0.012 | |
| synapse assembly | GO:0007416 | 143 | 0.012 | |
| positive regulation of macromolecule metabolic process | GO:0010604 | 405 | 0.012 | |
| purine ribonucleoside metabolic process | GO:0046128 | 127 | 0.011 | |
| male gamete generation | GO:0048232 | 201 | 0.011 | |
| positive regulation of intracellular signal transduction | GO:1902533 | 116 | 0.011 | |
| heart development | GO:0007507 | 82 | 0.011 | |
| immune system process | GO:0002376 | 347 | 0.011 | |
| pole plasm rna localization | GO:0007316 | 52 | 0.011 | |
| single organism catabolic process | GO:0044712 | 228 | 0.011 | |
| autophagy | GO:0006914 | 108 | 0.011 | |
| negative regulation of nervous system development | GO:0051961 | 92 | 0.011 | |
| negative regulation of protein modification process | GO:0031400 | 29 | 0.011 | |
| signal transduction by phosphorylation | GO:0023014 | 107 | 0.011 | |
| kidney development | GO:0001822 | 3 | 0.011 | |
| positive regulation of signaling | GO:0023056 | 243 | 0.010 | |
| ribonucleotide metabolic process | GO:0009259 | 145 | 0.010 | |
| positive regulation of cell death | GO:0010942 | 69 | 0.010 | |
| mitotic g2 dna damage checkpoint | GO:0007095 | 69 | 0.010 | |
| positive regulation of transcription from rna polymerase ii promoter | GO:0045944 | 204 | 0.010 | |
| organic acid metabolic process | GO:0006082 | 103 | 0.010 | |
| double strand break repair via nonhomologous end joining | GO:0006303 | 5 | 0.010 | |
| carbohydrate derivative biosynthetic process | GO:1901137 | 85 | 0.010 | |
