| rna splicing via transesterification reactions | GO:0000375 | 73 | 0.333 | |
| mrna processing | GO:0006397 | 104 | 0.198 | |
| internal protein amino acid acetylation | GO:0006475 | 38 | 0.180 | |
| negative regulation of gene expression | GO:0010629 | 387 | 0.161 | |
| body morphogenesis | GO:0010171 | 2 | 0.144 | |
| negative regulation of macromolecule biosynthetic process | GO:0010558 | 270 | 0.139 | |
| cell cell signaling involved in cell fate commitment | GO:0045168 | 210 | 0.138 | |
| mrna metabolic process | GO:0016071 | 124 | 0.133 | |
| negative regulation of cellular macromolecule biosynthetic process | GO:2000113 | 267 | 0.130 | |
| negative regulation of nucleobase containing compound metabolic process | GO:0045934 | 261 | 0.128 | |
| negative regulation of transcription dna templated | GO:0045892 | 237 | 0.125 | |
| rna processing | GO:0006396 | 147 | 0.110 | |
| mrna splicing via spliceosome | GO:0000398 | 73 | 0.101 | |
| larval development | GO:0002164 | 104 | 0.091 | Worm |
| embryo development ending in birth or egg hatching | GO:0009792 | 152 | 0.087 | Worm |
| rna splicing via transesterification reactions with bulged adenosine as nucleophile | GO:0000377 | 73 | 0.083 | |
| positive regulation of cell communication | GO:0010647 | 250 | 0.076 | |
| negative regulation of cellular biosynthetic process | GO:0031327 | 277 | 0.072 | |
| positive regulation of rna metabolic process | GO:0051254 | 271 | 0.070 | |
| negative regulation of rna biosynthetic process | GO:1902679 | 240 | 0.068 | |
| chromatin remodeling | GO:0006338 | 72 | 0.068 | |
| regulation of immune system process | GO:0002682 | 176 | 0.068 | |
| regulation of mrna metabolic process | GO:1903311 | 72 | 0.065 | |
| negative regulation of nitrogen compound metabolic process | GO:0051172 | 265 | 0.065 | |
| negative regulation of gene expression epigenetic | GO:0045814 | 77 | 0.064 | |
| negative regulation of nucleic acid templated transcription | GO:1903507 | 240 | 0.061 | |
| internal peptidyl lysine acetylation | GO:0018393 | 38 | 0.060 | |
| positive regulation of rna biosynthetic process | GO:1902680 | 266 | 0.056 | |
| negative regulation of biosynthetic process | GO:0009890 | 277 | 0.055 | |
| immune system process | GO:0002376 | 347 | 0.054 | |
| positive regulation of cellular component biogenesis | GO:0044089 | 80 | 0.054 | |
| regulation of cell proliferation | GO:0042127 | 163 | 0.052 | |
| positive regulation of cellular biosynthetic process | GO:0031328 | 316 | 0.051 | |
| imaginal disc derived appendage development | GO:0048737 | 399 | 0.050 | |
| positive regulation of gene expression | GO:0010628 | 290 | 0.049 | |
| positive regulation of macromolecule metabolic process | GO:0010604 | 405 | 0.049 | |
| positive regulation of response to stimulus | GO:0048584 | 323 | 0.049 | |
| transcription from rna polymerase ii promoter | GO:0006366 | 368 | 0.049 | |
| lateral inhibition | GO:0046331 | 206 | 0.048 | |
| camera type eye development | GO:0043010 | 4 | 0.048 | |
| positive regulation of macromolecule biosynthetic process | GO:0010557 | 283 | 0.048 | |
| stem cell division | GO:0017145 | 69 | 0.046 | |
| negative regulation of rna metabolic process | GO:0051253 | 251 | 0.045 | |
| cell proliferation | GO:0008283 | 299 | 0.045 | |
| response to hydrogen peroxide | GO:0042542 | 11 | 0.044 | |
| post embryonic appendage morphogenesis | GO:0035120 | 385 | 0.043 | |
| regulation of gene expression epigenetic | GO:0040029 | 128 | 0.043 | |
| macromolecular complex assembly | GO:0065003 | 256 | 0.042 | |
| positive regulation of signaling | GO:0023056 | 243 | 0.041 | |
| protein dna complex subunit organization | GO:0071824 | 86 | 0.041 | |
| nucleosome positioning | GO:0016584 | 3 | 0.041 | |
| head development | GO:0060322 | 135 | 0.040 | |
| positive regulation of nitrogen compound metabolic process | GO:0051173 | 354 | 0.040 | |
| regulation of gene silencing | GO:0060968 | 63 | 0.038 | |
| regulation of multi organism process | GO:0043900 | 131 | 0.037 | |
| chromatin modification | GO:0016568 | 147 | 0.036 | |
| covalent chromatin modification | GO:0016569 | 106 | 0.036 | |
| regulation of mrna processing | GO:0050684 | 71 | 0.036 | |
| reproductive behavior | GO:0019098 | 122 | 0.035 | Worm |
| positive regulation of signal transduction | GO:0009967 | 223 | 0.035 | |
| wing disc morphogenesis | GO:0007472 | 344 | 0.035 | |
| positive regulation of transcription dna templated | GO:0045893 | 266 | 0.034 | |
| tube morphogenesis | GO:0035239 | 191 | 0.034 | |
| chromatin silencing | GO:0006342 | 76 | 0.034 | |
| positive regulation of biosynthetic process | GO:0009891 | 316 | 0.033 | |
| negative regulation of cellular metabolic process | GO:0031324 | 382 | 0.032 | |
| nuclear pore organization | GO:0006999 | 1 | 0.032 | |
| positive regulation of transcription from rna polymerase ii promoter | GO:0045944 | 204 | 0.031 | |
| cell death | GO:0008219 | 279 | 0.031 | |
| jak stat cascade | GO:0007259 | 49 | 0.030 | |
| dna templated transcription elongation | GO:0006354 | 18 | 0.030 | |
| cellular macromolecular complex assembly | GO:0034622 | 153 | 0.029 | |
| rna splicing | GO:0008380 | 83 | 0.029 | |
| regulation of response to stress | GO:0080134 | 200 | 0.028 | |
| negative regulation of signal transduction | GO:0009968 | 206 | 0.027 | |
| protein acylation | GO:0043543 | 42 | 0.027 | |
| regulation of meiosis | GO:0040020 | 3 | 0.027 | |
| chromosome organization | GO:0051276 | 360 | 0.027 | |
| positive regulation of cellular component organization | GO:0051130 | 156 | 0.027 | |
| appendage development | GO:0048736 | 401 | 0.027 | |
| single organism biosynthetic process | GO:0044711 | 206 | 0.026 | |
| phagocytosis | GO:0006909 | 215 | 0.026 | |
| regulation of alternative mrna splicing via spliceosome | GO:0000381 | 60 | 0.026 | |
| multi organism behavior | GO:0051705 | 175 | 0.025 | Worm |
| oocyte differentiation | GO:0009994 | 145 | 0.024 | |
| regulation of chromatin modification | GO:1903308 | 28 | 0.024 | |
| protein modification process | GO:0036211 | 438 | 0.024 | |
| digestive tract morphogenesis | GO:0048546 | 127 | 0.023 | |
| imaginal disc derived appendage morphogenesis | GO:0035114 | 395 | 0.023 | |
| digestive tract development | GO:0048565 | 149 | 0.023 | |
| vesicle mediated transport | GO:0016192 | 381 | 0.023 | Worm |
| regulation of mrna splicing via spliceosome | GO:0048024 | 64 | 0.023 | |
| muscle structure development | GO:0061061 | 224 | 0.022 | |
| alternative mrna splicing via spliceosome | GO:0000380 | 60 | 0.022 | |
| gastrulation | GO:0007369 | 70 | 0.022 | |
| positive regulation of nucleic acid templated transcription | GO:1903508 | 266 | 0.021 | |
| regulation of rna splicing | GO:0043484 | 69 | 0.021 | |
| notch signaling pathway | GO:0007219 | 120 | 0.021 | |
| regulation of growth | GO:0040008 | 233 | 0.021 | Worm |
| negative regulation of transcription from rna polymerase ii promoter | GO:0000122 | 119 | 0.020 | |
| response to external biotic stimulus | GO:0043207 | 293 | 0.020 | |
| positive regulation of protein deacetylation | GO:0090312 | 2 | 0.019 | |
| cell adhesion | GO:0007155 | 136 | 0.019 | |
| peptidyl proline modification | GO:0018208 | 3 | 0.019 | |
| protein acetylation | GO:0006473 | 39 | 0.019 | |
| stem cell development | GO:0048864 | 79 | 0.019 | |
| central nervous system development | GO:0007417 | 201 | 0.019 | |
| death | GO:0016265 | 284 | 0.018 | |
| gene silencing | GO:0016458 | 138 | 0.018 | |
| peptidyl lysine modification | GO:0018205 | 57 | 0.018 | |
| gland development | GO:0048732 | 191 | 0.017 | |
| regulation of organelle organization | GO:0033043 | 196 | 0.017 | |
| stem cell differentiation | GO:0048863 | 117 | 0.017 | |
| chromosome separation | GO:0051304 | 42 | 0.017 | |
| regulation of chromatin silencing | GO:0031935 | 36 | 0.017 | |
| retina development in camera type eye | GO:0060041 | 4 | 0.017 | |
| appendage morphogenesis | GO:0035107 | 397 | 0.017 | |
| cell motility | GO:0048870 | 251 | 0.016 | Human |
| regulation of transcription from rna polymerase ii promoter | GO:0006357 | 378 | 0.016 | |
| histone acetylation | GO:0016573 | 38 | 0.016 | |
| biological adhesion | GO:0022610 | 138 | 0.016 | |
| multi multicellular organism process | GO:0044706 | 123 | 0.015 | Worm |
| regionalization | GO:0003002 | 416 | 0.015 | |
| developmental pigmentation | GO:0048066 | 68 | 0.015 | |
| posttranscriptional gene silencing by rna | GO:0035194 | 45 | 0.015 | |
| dna replication | GO:0006260 | 48 | 0.015 | |
| endocytosis | GO:0006897 | 310 | 0.015 | Worm |
| dorsal ventral axis specification | GO:0009950 | 66 | 0.015 | |
| positive regulation of cell death | GO:0010942 | 69 | 0.015 | |
| homeostatic process | GO:0042592 | 199 | 0.014 | |
| positive regulation of multicellular organismal process | GO:0051240 | 143 | 0.014 | Worm |
| brain development | GO:0007420 | 120 | 0.014 | |
| cellular protein modification process | GO:0006464 | 438 | 0.014 | |
| programmed cell death | GO:0012501 | 257 | 0.014 | |
| positive regulation of nucleobase containing compound metabolic process | GO:0045935 | 332 | 0.014 | |
| cellular response to organic substance | GO:0071310 | 132 | 0.014 | |
| gene silencing by rna | GO:0031047 | 57 | 0.014 | |
| positive regulation of cellular amino acid metabolic process | GO:0045764 | 0 | 0.014 | |
| regulation of cellular component biogenesis | GO:0044087 | 201 | 0.013 | |
| response to biotic stimulus | GO:0009607 | 294 | 0.013 | |
| tube development | GO:0035295 | 244 | 0.013 | |
| protein complex biogenesis | GO:0070271 | 201 | 0.013 | |
| response to other organism | GO:0051707 | 293 | 0.013 | |
| transcription initiation from rna polymerase ii promoter | GO:0006367 | 25 | 0.013 | |
| regulation of programmed cell death | GO:0043067 | 152 | 0.013 | |
| imaginal disc derived wing morphogenesis | GO:0007476 | 337 | 0.013 | |
| negative regulation of sequence specific dna binding transcription factor activity | GO:0043433 | 4 | 0.013 | |
| negative regulation of signaling | GO:0023057 | 219 | 0.013 | |
| response to heat | GO:0009408 | 63 | 0.013 | |
| cellularization | GO:0007349 | 90 | 0.013 | |
| salivary gland cell autophagic cell death | GO:0035071 | 83 | 0.013 | |
| regulation of mitosis | GO:0007088 | 56 | 0.012 | |
| histone h4 acetylation | GO:0043967 | 13 | 0.012 | |
| interspecies interaction between organisms | GO:0044419 | 16 | 0.012 | |
| regulation of protein deacetylation | GO:0090311 | 2 | 0.012 | |
| negative regulation of cellular protein metabolic process | GO:0032269 | 85 | 0.012 | |
| regulation of apoptotic process | GO:0042981 | 130 | 0.012 | |
| dorsal ventral pattern formation | GO:0009953 | 133 | 0.012 | |
| organonitrogen compound metabolic process | GO:1901564 | 318 | 0.012 | |
| embryonic morphogenesis | GO:0048598 | 206 | 0.012 | |
| positive regulation of intracellular signal transduction | GO:1902533 | 116 | 0.012 | |
| regulation of nuclear division | GO:0051783 | 58 | 0.012 | |
| transcription elongation from rna polymerase ii promoter | GO:0006368 | 18 | 0.012 | |
| regulation of chromatin organization | GO:1902275 | 32 | 0.012 | |
| digestive system development | GO:0055123 | 149 | 0.012 | |
| regulation of dna templated transcription elongation | GO:0032784 | 17 | 0.011 | |
| epithelium migration | GO:0090132 | 148 | 0.011 | |
| regulation of protein complex assembly | GO:0043254 | 42 | 0.011 | |
| anatomical structure homeostasis | GO:0060249 | 97 | 0.011 | |
| regulation of proteolysis | GO:0030162 | 87 | 0.011 | |
| molting cycle | GO:0042303 | 56 | 0.011 | |
| negative regulation of developmental process | GO:0051093 | 201 | 0.011 | |
| intracellular signal transduction | GO:0035556 | 300 | 0.011 | |
| regulation of phosphatase activity | GO:0010921 | 3 | 0.011 | |
| negative regulation of cell cycle | GO:0045786 | 116 | 0.011 | |
| negative regulation of cell communication | GO:0010648 | 223 | 0.011 | |
| regulation of protein metabolic process | GO:0051246 | 256 | 0.011 | |
| regulation of cellular response to stress | GO:0080135 | 89 | 0.011 | |
| neuronal stem cell maintenance | GO:0097150 | 4 | 0.010 | |
| mitotic spindle checkpoint | GO:0071174 | 11 | 0.010 | |
| mitotic nuclear division | GO:0007067 | 213 | 0.010 | |
| negative regulation of intrinsic apoptotic signaling pathway | GO:2001243 | 1 | 0.010 | |
| protein complex assembly | GO:0006461 | 200 | 0.010 | |
| regulation of histone modification | GO:0031056 | 20 | 0.010 | |
| cell division | GO:0051301 | 248 | 0.010 | Human |
| mrna cis splicing via spliceosome | GO:0045292 | 1 | 0.010 | |