| cullin deneddylation | GO:0010388 | 3 | 0.475 | Human |
| mrna cis splicing via spliceosome | GO:0045292 | 1 | 0.197 | |
| regulation of cell cycle process | GO:0010564 | 181 | 0.170 | |
| negative regulation of cell cycle process | GO:0010948 | 109 | 0.157 | |
| posttranscriptional regulation of gene expression | GO:0010608 | 145 | 0.134 | |
| mitotic dna integrity checkpoint | GO:0044774 | 75 | 0.134 | |
| protein complex biogenesis | GO:0070271 | 201 | 0.133 | |
| rna processing | GO:0006396 | 147 | 0.128 | |
| negative regulation of cell cycle phase transition | GO:1901988 | 103 | 0.126 | |
| protein deneddylation | GO:0000338 | 8 | 0.114 | Human |
| negative regulation of gene expression | GO:0010629 | 387 | 0.097 | |
| negative regulation of cell cycle | GO:0045786 | 116 | 0.085 | |
| rrna processing | GO:0006364 | 3 | 0.074 | |
| cellular catabolic process | GO:0044248 | 372 | 0.070 | |
| organic substance catabolic process | GO:1901575 | 308 | 0.068 | |
| mitotic cell cycle phase transition | GO:0044772 | 138 | 0.068 | |
| regulation of cell cycle | GO:0051726 | 291 | 0.067 | |
| posttranscriptional gene silencing | GO:0016441 | 46 | 0.066 | |
| chromosome segregation | GO:0007059 | 157 | 0.063 | |
| lateral inhibition | GO:0046331 | 206 | 0.062 | |
| vesicle mediated transport | GO:0016192 | 381 | 0.059 | |
| gene silencing by rna | GO:0031047 | 57 | 0.056 | |
| posttranscriptional gene silencing by rna | GO:0035194 | 45 | 0.053 | |
| mitotic g2 dna damage checkpoint | GO:0007095 | 69 | 0.051 | |
| mitotic dna damage checkpoint | GO:0044773 | 74 | 0.050 | |
| negative regulation of cellular metabolic process | GO:0031324 | 382 | 0.050 | |
| regulation of transport | GO:0051049 | 181 | 0.049 | |
| organonitrogen compound metabolic process | GO:1901564 | 318 | 0.045 | |
| regulation of rna splicing | GO:0043484 | 69 | 0.043 | |
| single organism intracellular transport | GO:1902582 | 207 | 0.041 | |
| regulation of intracellular signal transduction | GO:1902531 | 236 | 0.039 | |
| endocytosis | GO:0006897 | 310 | 0.038 | |
| positive regulation of signal transduction | GO:0009967 | 223 | 0.037 | |
| establishment of localization in cell | GO:0051649 | 402 | 0.036 | |
| ncrna metabolic process | GO:0034660 | 43 | 0.035 | |
| heterocycle catabolic process | GO:0046700 | 166 | 0.034 | |
| mitotic spindle organization | GO:0007052 | 220 | 0.034 | |
| macromolecular complex assembly | GO:0065003 | 256 | 0.033 | |
| response to organic substance | GO:0010033 | 284 | 0.033 | |
| cell cycle checkpoint | GO:0000075 | 95 | 0.033 | |
| regulation of mitotic cell cycle | GO:0007346 | 190 | 0.033 | |
| catabolic process | GO:0009056 | 409 | 0.032 | |
| cellular protein modification process | GO:0006464 | 438 | 0.032 | Human |
| dna integrity checkpoint | GO:0031570 | 81 | 0.030 | |
| establishment of organelle localization | GO:0051656 | 122 | 0.030 | |
| single organism cellular localization | GO:1902580 | 180 | 0.029 | |
| negative regulation of mitotic cell cycle phase transition | GO:1901991 | 103 | 0.029 | |
| intracellular signal transduction | GO:0035556 | 300 | 0.029 | |
| positive regulation of response to stimulus | GO:0048584 | 323 | 0.029 | |
| positive regulation of macromolecule metabolic process | GO:0010604 | 405 | 0.029 | |
| regulation of protein stability | GO:0031647 | 43 | 0.028 | |
| cellular macromolecule catabolic process | GO:0044265 | 136 | 0.027 | |
| organelle localization | GO:0051640 | 148 | 0.027 | |
| intracellular transport | GO:0046907 | 228 | 0.025 | |
| phagocytosis | GO:0006909 | 215 | 0.024 | |
| nuclear transport | GO:0051169 | 72 | 0.024 | |
| g2 dna damage checkpoint | GO:0031572 | 69 | 0.023 | |
| carbohydrate derivative metabolic process | GO:1901135 | 217 | 0.022 | |
| regulation of transcription from rna polymerase ii promoter | GO:0006357 | 378 | 0.022 | |
| spindle organization | GO:0007051 | 253 | 0.021 | |
| organic cyclic compound catabolic process | GO:1901361 | 168 | 0.021 | |
| gene silencing | GO:0016458 | 138 | 0.021 | |
| single organism catabolic process | GO:0044712 | 228 | 0.021 | |
| protein complex assembly | GO:0006461 | 200 | 0.020 | |
| positive regulation of cell communication | GO:0010647 | 250 | 0.020 | |
| nuclear transcribed mrna catabolic process | GO:0000956 | 24 | 0.020 | |
| macromolecule catabolic process | GO:0009057 | 161 | 0.020 | |
| rna interference | GO:0016246 | 27 | 0.020 | |
| negative regulation of cellular protein metabolic process | GO:0032269 | 85 | 0.019 | |
| regulation of mitotic cell cycle phase transition | GO:1901990 | 130 | 0.019 | |
| histone h3 k9 modification | GO:0061647 | 12 | 0.019 | |
| mitotic sister chromatid segregation | GO:0000070 | 87 | 0.019 | |
| molting cycle | GO:0042303 | 56 | 0.018 | |
| mrna metabolic process | GO:0016071 | 124 | 0.018 | |
| mitotic g2 m transition checkpoint | GO:0044818 | 70 | 0.018 | |
| cellular response to chemical stimulus | GO:0070887 | 199 | 0.018 | |
| mitotic cell cycle checkpoint | GO:0007093 | 88 | 0.017 | |
| cellular macromolecular complex assembly | GO:0034622 | 153 | 0.017 | |
| cellular nitrogen compound catabolic process | GO:0044270 | 165 | 0.017 | |
| ribonucleoprotein complex biogenesis | GO:0022613 | 31 | 0.017 | |
| mrna catabolic process | GO:0006402 | 33 | 0.017 | |
| defense response to bacterium | GO:0042742 | 178 | 0.016 | |
| regulation of catabolic process | GO:0009894 | 170 | 0.016 | |
| reproductive structure development | GO:0048608 | 74 | 0.016 | |
| nucleobase containing compound catabolic process | GO:0034655 | 165 | 0.016 | |
| negative regulation of neurotransmitter secretion | GO:0046929 | 2 | 0.016 | |
| developmental growth | GO:0048589 | 280 | 0.016 | |
| regulation of cell cycle phase transition | GO:1901987 | 130 | 0.015 | |
| protein modification by small protein removal | GO:0070646 | 28 | 0.015 | Human |
| nucleoside triphosphate catabolic process | GO:0009143 | 108 | 0.015 | |
| regulation of cell proliferation | GO:0042127 | 163 | 0.015 | |
| cytoskeleton dependent cytokinesis | GO:0061640 | 81 | 0.015 | |
| cell cell signaling involved in cell fate commitment | GO:0045168 | 210 | 0.015 | |
| mrna processing | GO:0006397 | 104 | 0.014 | |
| cellular protein catabolic process | GO:0044257 | 83 | 0.014 | |
| positive regulation of rho protein signal transduction | GO:0035025 | 4 | 0.014 | |
| response to oxygen containing compound | GO:1901700 | 200 | 0.014 | |
| transmembrane receptor protein tyrosine kinase signaling pathway | GO:0007169 | 116 | 0.014 | |
| positive regulation of intracellular signal transduction | GO:1902533 | 116 | 0.014 | |
| rna catabolic process | GO:0006401 | 37 | 0.014 | |
| olfactory learning | GO:0008355 | 56 | 0.014 | |
| regulation of cdc42 protein signal transduction | GO:0032489 | 3 | 0.014 | |
| protein modification process | GO:0036211 | 438 | 0.014 | Human |
| regulation of cytoplasmic transport | GO:1903649 | 47 | 0.013 | |
| regulation of cellular protein catabolic process | GO:1903362 | 44 | 0.013 | |
| regulation of localization | GO:0032879 | 275 | 0.013 | |
| regulation of cellular component biogenesis | GO:0044087 | 201 | 0.013 | |
| response to nitrogen compound | GO:1901698 | 90 | 0.013 | |
| response to other organism | GO:0051707 | 293 | 0.013 | |
| negative regulation of mitotic cell cycle | GO:0045930 | 109 | 0.013 | |
| positive regulation of signaling | GO:0023056 | 243 | 0.012 | |
| response to organic cyclic compound | GO:0014070 | 89 | 0.012 | |
| peptidyl serine phosphorylation | GO:0018105 | 7 | 0.012 | |
| regulation of meiosis | GO:0040020 | 3 | 0.012 | |
| cellular homeostasis | GO:0019725 | 80 | 0.012 | |
| aromatic compound catabolic process | GO:0019439 | 166 | 0.012 | |
| negative regulation of cellular biosynthetic process | GO:0031327 | 277 | 0.012 | |
| nucleoside phosphate catabolic process | GO:1901292 | 110 | 0.012 | |
| regulation of developmental growth | GO:0048638 | 174 | 0.012 | |
| cellular response to organic substance | GO:0071310 | 132 | 0.012 | |
| cytoplasmic transport | GO:0016482 | 130 | 0.012 | |
| regulation of protein metabolic process | GO:0051246 | 256 | 0.012 | |
| positive regulation of developmental growth | GO:0048639 | 62 | 0.011 | |
| proteolysis involved in cellular protein catabolic process | GO:0051603 | 83 | 0.011 | |
| embryo development ending in birth or egg hatching | GO:0009792 | 152 | 0.011 | Worm |
| organonitrogen compound catabolic process | GO:1901565 | 128 | 0.011 | |
| ras protein signal transduction | GO:0007265 | 88 | 0.011 | |
| modification dependent macromolecule catabolic process | GO:0043632 | 79 | 0.011 | |
| purine containing compound catabolic process | GO:0072523 | 112 | 0.011 | |
| protein catabolic process | GO:0030163 | 101 | 0.011 | |
| negative regulation of cell proliferation | GO:0008285 | 69 | 0.011 | |
| cell division | GO:0051301 | 248 | 0.011 | Worm |
| photoreceptor cell differentiation | GO:0046530 | 170 | 0.010 | |
| regulation of phosphatase activity | GO:0010921 | 3 | 0.010 | |
| mitotic nuclear division | GO:0007067 | 213 | 0.010 | |
