| positive regulation of nucleic acid templated transcription | GO:1903508 | 266 | 0.659 | |
| positive regulation of gene expression | GO:0010628 | 290 | 0.493 | |
| positive regulation of macromolecule metabolic process | GO:0010604 | 405 | 0.397 | |
| positive regulation of biosynthetic process | GO:0009891 | 316 | 0.354 | |
| positive regulation of transcription from rna polymerase ii promoter | GO:0045944 | 204 | 0.353 | |
| positive regulation of macromolecule biosynthetic process | GO:0010557 | 283 | 0.281 | |
| positive regulation of transcription dna templated | GO:0045893 | 266 | 0.278 | |
| positive regulation of rna biosynthetic process | GO:1902680 | 266 | 0.272 | |
| positive regulation of nitrogen compound metabolic process | GO:0051173 | 354 | 0.244 | |
| negative regulation of cellular metabolic process | GO:0031324 | 382 | 0.225 | |
| positive regulation of cellular biosynthetic process | GO:0031328 | 316 | 0.221 | |
| positive regulation of nucleobase containing compound metabolic process | GO:0045935 | 332 | 0.206 | |
| negative regulation of gene expression | GO:0010629 | 387 | 0.153 | |
| positive regulation of rna metabolic process | GO:0051254 | 271 | 0.149 | |
| negative regulation of macromolecule biosynthetic process | GO:0010558 | 270 | 0.129 | |
| regulation of protein metabolic process | GO:0051246 | 256 | 0.115 | |
| transcription from rna polymerase ii promoter | GO:0006366 | 368 | 0.103 | |
| segmentation | GO:0035282 | 207 | 0.081 | |
| peptidyl lysine modification | GO:0018205 | 57 | 0.081 | |
| regulation of organelle organization | GO:0033043 | 196 | 0.069 | |
| rna splicing via transesterification reactions | GO:0000375 | 73 | 0.068 | |
| negative regulation of nitrogen compound metabolic process | GO:0051172 | 265 | 0.067 | |
| oocyte differentiation | GO:0009994 | 145 | 0.066 | |
| negative regulation of transcription dna templated | GO:0045892 | 237 | 0.065 | |
| single organism cellular localization | GO:1902580 | 180 | 0.065 | |
| negative regulation of biosynthetic process | GO:0009890 | 277 | 0.060 | |
| regulation of cellular amino acid metabolic process | GO:0006521 | 0 | 0.054 | |
| histone acetylation | GO:0016573 | 38 | 0.050 | |
| regulation of intracellular signal transduction | GO:1902531 | 236 | 0.045 | |
| translation | GO:0006412 | 69 | 0.045 | |
| regulation of mitosis | GO:0007088 | 56 | 0.044 | |
| negative regulation of cellular macromolecule biosynthetic process | GO:2000113 | 267 | 0.044 | |
| intracellular signal transduction | GO:0035556 | 300 | 0.044 | |
| regulation of response to stress | GO:0080134 | 200 | 0.043 | |
| regulation of transcription from rna polymerase ii promoter | GO:0006357 | 378 | 0.042 | |
| immune system process | GO:0002376 | 347 | 0.042 | |
| protein dna complex subunit organization | GO:0071824 | 86 | 0.042 | |
| negative regulation of rna biosynthetic process | GO:1902679 | 240 | 0.041 | |
| positive regulation of response to stimulus | GO:0048584 | 323 | 0.041 | |
| eye development | GO:0001654 | 323 | 0.040 | |
| protein transport | GO:0015031 | 155 | 0.039 | |
| regulation of cellular ketone metabolic process | GO:0010565 | 3 | 0.039 | |
| phosphorylation | GO:0016310 | 294 | 0.039 | |
| blastoderm segmentation | GO:0007350 | 159 | 0.039 | |
| negative regulation of rna metabolic process | GO:0051253 | 251 | 0.038 | |
| cellular ketone metabolic process | GO:0042180 | 24 | 0.037 | |
| regulation of mrna splicing via spliceosome | GO:0048024 | 64 | 0.036 | |
| negative regulation of nucleic acid templated transcription | GO:1903507 | 240 | 0.034 | |
| cell division | GO:0051301 | 248 | 0.033 | Fly |
| negative regulation of mitotic cell cycle phase transition | GO:1901991 | 103 | 0.033 | |
| dna integrity checkpoint | GO:0031570 | 81 | 0.032 | |
| regulation of cell cycle | GO:0051726 | 291 | 0.032 | |
| tripartite regional subdivision | GO:0007351 | 103 | 0.031 | |
| regulation of molecular function | GO:0065009 | 217 | 0.031 | |
| localization of cell | GO:0051674 | 257 | 0.029 | |
| mitotic sister chromatid segregation | GO:0000070 | 87 | 0.029 | |
| organonitrogen compound metabolic process | GO:1901564 | 318 | 0.029 | |
| mrna processing | GO:0006397 | 104 | 0.029 | |
| embryonic axis specification | GO:0000578 | 107 | 0.029 | |
| macromolecular complex assembly | GO:0065003 | 256 | 0.029 | |
| embryonic pattern specification | GO:0009880 | 174 | 0.029 | |
| regulation of rna splicing | GO:0043484 | 69 | 0.028 | |
| camera type eye development | GO:0043010 | 4 | 0.028 | |
| mrna metabolic process | GO:0016071 | 124 | 0.028 | |
| phagocytosis | GO:0006909 | 215 | 0.027 | |
| cellular macromolecular complex assembly | GO:0034622 | 153 | 0.026 | |
| regulation of cellular amine metabolic process | GO:0033238 | 3 | 0.026 | |
| regulation of phosphate metabolic process | GO:0019220 | 210 | 0.026 | |
| regulation of cellular protein metabolic process | GO:0032268 | 243 | 0.026 | |
| negative regulation of cell cycle phase transition | GO:1901988 | 103 | 0.026 | |
| chromatin remodeling | GO:0006338 | 72 | 0.025 | |
| regulation of small gtpase mediated signal transduction | GO:0051056 | 93 | 0.025 | |
| cellular macromolecule localization | GO:0070727 | 220 | 0.025 | |
| positive regulation of multicellular organismal process | GO:0051240 | 143 | 0.025 | |
| rna processing | GO:0006396 | 147 | 0.025 | |
| rna splicing via transesterification reactions with bulged adenosine as nucleophile | GO:0000377 | 73 | 0.025 | |
| regulation of cell cycle process | GO:0010564 | 181 | 0.025 | |
| germarium derived oocyte differentiation | GO:0030706 | 29 | 0.025 | |
| positive regulation of cellular amine metabolic process | GO:0033240 | 0 | 0.025 | |
| mitotic spindle organization | GO:0007052 | 220 | 0.024 | |
| signal transduction by phosphorylation | GO:0023014 | 107 | 0.024 | |
| positive regulation of intracellular signal transduction | GO:1902533 | 116 | 0.024 | |
| positive regulation of signaling | GO:0023056 | 243 | 0.023 | |
| mrna splicing via spliceosome | GO:0000398 | 73 | 0.023 | |
| nuclear division | GO:0000280 | 332 | 0.023 | Fly |
| amine metabolic process | GO:0009308 | 12 | 0.023 | |
| negative regulation of cell cycle process | GO:0010948 | 109 | 0.023 | |
| negative regulation of gene expression epigenetic | GO:0045814 | 77 | 0.022 | |
| positive regulation of cellular component biogenesis | GO:0044089 | 80 | 0.022 | |
| erk1 and erk2 cascade | GO:0070371 | 39 | 0.022 | |
| protein complex biogenesis | GO:0070271 | 201 | 0.021 | |
| asymmetric stem cell division | GO:0098722 | 49 | 0.021 | Fly |
| cell cycle checkpoint | GO:0000075 | 95 | 0.021 | |
| positive regulation of signal transduction | GO:0009967 | 223 | 0.021 | |
| programmed cell death | GO:0012501 | 257 | 0.020 | |
| heterochromatin organization | GO:0070828 | 25 | 0.020 | |
| establishment of protein localization | GO:0045184 | 163 | 0.020 | |
| endocytosis | GO:0006897 | 310 | 0.020 | |
| regulation of translation | GO:0006417 | 56 | 0.020 | |
| cellular amino acid metabolic process | GO:0006520 | 61 | 0.020 | |
| regulation of cell cycle phase transition | GO:1901987 | 130 | 0.019 | |
| small gtpase mediated signal transduction | GO:0007264 | 88 | 0.019 | |
| mapk cascade | GO:0000165 | 107 | 0.019 | |
| cellular protein localization | GO:0034613 | 160 | 0.019 | |
| regulation of protein acetylation | GO:1901983 | 7 | 0.019 | |
| anterior posterior pattern specification | GO:0009952 | 136 | 0.019 | |
| negative regulation of cell cycle | GO:0045786 | 116 | 0.019 | |
| positive regulation of cell communication | GO:0010647 | 250 | 0.018 | |
| epithelial cell differentiation | GO:0030855 | 322 | 0.018 | |
| regulation of mitotic cell cycle | GO:0007346 | 190 | 0.018 | |
| eye photoreceptor cell development | GO:0042462 | 81 | 0.018 | |
| small molecule metabolic process | GO:0044281 | 305 | 0.018 | |
| regulation of phosphorus metabolic process | GO:0051174 | 210 | 0.018 | |
| gene silencing by mirna | GO:0035195 | 22 | 0.018 | |
| meiotic dna double strand break formation involved in reciprocal meiotic recombination | GO:0010780 | 1 | 0.018 | Fly |
| cell cycle dna replication | GO:0044786 | 23 | 0.018 | |
| regulation of meiosis | GO:0040020 | 3 | 0.017 | |
| cellular amine metabolic process | GO:0044106 | 12 | 0.017 | |
| regulation of mitotic cell cycle phase transition | GO:1901990 | 130 | 0.017 | |
| cell migration | GO:0016477 | 238 | 0.017 | |
| organic substance transport | GO:0071702 | 257 | 0.017 | |
| intracellular transport | GO:0046907 | 228 | 0.017 | |
| regulation of erk1 and erk2 cascade | GO:0070372 | 39 | 0.017 | |
| spinal cord development | GO:0021510 | 1 | 0.017 | |
| regulation of anatomical structure morphogenesis | GO:0022603 | 242 | 0.016 | |
| positive regulation of erk1 and erk2 cascade | GO:0070374 | 36 | 0.016 | |
| protein localization | GO:0008104 | 284 | 0.016 | |
| positive regulation of cellular component organization | GO:0051130 | 156 | 0.016 | |
| regulation of mrna processing | GO:0050684 | 71 | 0.016 | |
| organelle fission | GO:0048285 | 340 | 0.016 | Fly |
| regulation of gene expression epigenetic | GO:0040029 | 128 | 0.015 | |
| vesicle mediated transport | GO:0016192 | 381 | 0.015 | |
| mitotic dna integrity checkpoint | GO:0044774 | 75 | 0.015 | |
| chromosome organization | GO:0051276 | 360 | 0.015 | |
| mitotic cell cycle checkpoint | GO:0007093 | 88 | 0.015 | |
| negative regulation of mitotic cell cycle | GO:0045930 | 109 | 0.015 | |
| oxoacid metabolic process | GO:0043436 | 103 | 0.015 | |
| negative regulation of cellular biosynthetic process | GO:0031327 | 277 | 0.015 | |
| dna metabolic process | GO:0006259 | 227 | 0.014 | Fly |
| regulation of mrna metabolic process | GO:1903311 | 72 | 0.014 | |
| regulation of phosphorylation | GO:0042325 | 147 | 0.014 | |
| oocyte development | GO:0048599 | 124 | 0.014 | |
| rna splicing | GO:0008380 | 83 | 0.014 | |
| organelle assembly | GO:0070925 | 198 | 0.014 | |
| mitotic nuclear division | GO:0007067 | 213 | 0.014 | |
| retina development in camera type eye | GO:0060041 | 4 | 0.014 | |
| positive regulation of phosphate metabolic process | GO:0045937 | 139 | 0.014 | |
| cell motility | GO:0048870 | 251 | 0.014 | |
| regionalization | GO:0003002 | 416 | 0.013 | |
| dendrite morphogenesis | GO:0048813 | 199 | 0.013 | |
| positive regulation of ras protein signal transduction | GO:0046579 | 43 | 0.013 | |
| regulation of chromatin modification | GO:1903308 | 28 | 0.013 | |
| single organism biosynthetic process | GO:0044711 | 206 | 0.013 | |
| ras protein signal transduction | GO:0007265 | 88 | 0.013 | |
| germarium derived egg chamber formation | GO:0007293 | 101 | 0.013 | |
| actin cytoskeleton organization | GO:0030036 | 206 | 0.013 | |
| positive regulation of mapk cascade | GO:0043410 | 63 | 0.013 | |
| cellularization | GO:0007349 | 90 | 0.013 | |
| carboxylic acid metabolic process | GO:0019752 | 92 | 0.013 | |
| posttranscriptional regulation of gene expression | GO:0010608 | 145 | 0.013 | |
| peptidyl amino acid modification | GO:0018193 | 105 | 0.013 | |
| regulation of immune system process | GO:0002682 | 176 | 0.012 | |
| positive regulation of phosphorylation | GO:0042327 | 87 | 0.012 | |
| single organism intracellular transport | GO:1902582 | 207 | 0.012 | |
| positive regulation of cellular amino acid metabolic process | GO:0045764 | 0 | 0.012 | |
| regulation of mapk cascade | GO:0043408 | 92 | 0.012 | |
| protein targeting | GO:0006605 | 64 | 0.012 | |
| rna localization | GO:0006403 | 115 | 0.012 | |
| gene silencing | GO:0016458 | 138 | 0.012 | |
| protein dna complex assembly | GO:0065004 | 63 | 0.012 | |
| regulation of cell division | GO:0051302 | 72 | 0.012 | |
| organic acid metabolic process | GO:0006082 | 103 | 0.011 | |
| stem cell division | GO:0017145 | 69 | 0.011 | Fly |
| negative regulation of g1 s transition of mitotic cell cycle | GO:2000134 | 13 | 0.011 | |
| regulation of cellular response to stress | GO:0080135 | 89 | 0.011 | |
| protein acylation | GO:0043543 | 42 | 0.011 | |
| anterior posterior axis specification | GO:0009948 | 109 | 0.011 | |
| histone exchange | GO:0043486 | 21 | 0.011 | |
| stem cell proliferation | GO:0072089 | 88 | 0.011 | Fly |
| regulation of ras protein signal transduction | GO:0046578 | 93 | 0.011 | |
| protein localization to organelle | GO:0033365 | 82 | 0.010 | |
| sister chromatid segregation | GO:0000819 | 92 | 0.010 | |
| stem cell differentiation | GO:0048863 | 117 | 0.010 | |
| mitotic g2 dna damage checkpoint | GO:0007095 | 69 | 0.010 | |
| negative regulation of transcription from rna polymerase ii promoter | GO:0000122 | 119 | 0.010 | |
| mitotic g2 m transition checkpoint | GO:0044818 | 70 | 0.010 | |
| cellular response to organic substance | GO:0071310 | 132 | 0.010 | |
