| negative regulation of cell communication | GO:0010648 | 223 | 0.409 | |
| negative regulation of response to stimulus | GO:0048585 | 258 | 0.324 | |
| negative regulation of signal transduction | GO:0009968 | 206 | 0.251 | |
| small gtpase mediated signal transduction | GO:0007264 | 88 | 0.240 | |
| meiotic cell cycle process | GO:1903046 | 132 | 0.181 | |
| death | GO:0016265 | 284 | 0.164 | |
| cell motility | GO:0048870 | 251 | 0.151 | |
| regulation of small gtpase mediated signal transduction | GO:0051056 | 93 | 0.126 | |
| meiotic cell cycle | GO:0051321 | 171 | 0.115 | |
| homeostatic process | GO:0042592 | 199 | 0.115 | |
| negative regulation of signaling | GO:0023057 | 219 | 0.111 | |
| embryo development ending in birth or egg hatching | GO:0009792 | 152 | 0.108 | Worm |
| protein dna complex subunit organization | GO:0071824 | 86 | 0.102 | |
| regulation of ras protein signal transduction | GO:0046578 | 93 | 0.100 | |
| intracellular signal transduction | GO:0035556 | 300 | 0.093 | |
| protein modification process | GO:0036211 | 438 | 0.083 | |
| body morphogenesis | GO:0010171 | 2 | 0.081 | |
| chromosome segregation | GO:0007059 | 157 | 0.070 | |
| post embryonic appendage morphogenesis | GO:0035120 | 385 | 0.068 | |
| protein catabolic process | GO:0030163 | 101 | 0.065 | |
| cell migration | GO:0016477 | 238 | 0.063 | |
| macromolecular complex assembly | GO:0065003 | 256 | 0.062 | |
| positive regulation of cellular component biogenesis | GO:0044089 | 80 | 0.061 | |
| regulation of cell morphogenesis | GO:0022604 | 163 | 0.060 | |
| organelle fission | GO:0048285 | 340 | 0.059 | |
| signal transduction by phosphorylation | GO:0023014 | 107 | 0.057 | |
| cellular response to abiotic stimulus | GO:0071214 | 58 | 0.057 | |
| protein complex biogenesis | GO:0070271 | 201 | 0.056 | |
| cellular response to dna damage stimulus | GO:0006974 | 223 | 0.056 | |
| ras protein signal transduction | GO:0007265 | 88 | 0.055 | |
| synaptic transmission | GO:0007268 | 288 | 0.053 | |
| detection of stimulus | GO:0051606 | 156 | 0.050 | |
| response to radiation | GO:0009314 | 155 | 0.047 | |
| negative regulation of small gtpase mediated signal transduction | GO:0051058 | 13 | 0.047 | |
| imaginal disc derived wing morphogenesis | GO:0007476 | 337 | 0.045 | |
| response to abiotic stimulus | GO:0009628 | 341 | 0.044 | |
| regulation of cell cycle | GO:0051726 | 291 | 0.044 | |
| modification dependent protein catabolic process | GO:0019941 | 78 | 0.044 | |
| response to oxygen containing compound | GO:1901700 | 200 | 0.044 | |
| cellular protein catabolic process | GO:0044257 | 83 | 0.043 | |
| regulation of intracellular signal transduction | GO:1902531 | 236 | 0.042 | |
| columnar cuboidal epithelial cell development | GO:0002066 | 249 | 0.041 | |
| response to organic substance | GO:0010033 | 284 | 0.040 | |
| regulation of anatomical structure morphogenesis | GO:0022603 | 242 | 0.039 | |
| localization of cell | GO:0051674 | 257 | 0.038 | |
| cellular macromolecular complex assembly | GO:0034622 | 153 | 0.038 | |
| regulation of cellular protein metabolic process | GO:0032268 | 243 | 0.036 | |
| multi organism reproductive behavior | GO:0044705 | 121 | 0.035 | |
| dendrite development | GO:0016358 | 204 | 0.033 | |
| enzyme linked receptor protein signaling pathway | GO:0007167 | 179 | 0.033 | |
| nuclear division | GO:0000280 | 332 | 0.032 | |
| spermatid differentiation | GO:0048515 | 114 | 0.032 | |
| reproductive behavior | GO:0019098 | 122 | 0.031 | |
| epithelial cell development | GO:0002064 | 274 | 0.031 | |
| proteolysis | GO:0006508 | 192 | 0.030 | |
| phosphorylation | GO:0016310 | 294 | 0.030 | |
| eye development | GO:0001654 | 323 | 0.030 | |
| positive regulation of signaling | GO:0023056 | 243 | 0.029 | |
| regulation of localization | GO:0032879 | 275 | 0.029 | |
| single organism behavior | GO:0044708 | 391 | 0.029 | |
| tissue morphogenesis | GO:0048729 | 297 | 0.029 | |
| protein complex assembly | GO:0006461 | 200 | 0.028 | |
| dendrite morphogenesis | GO:0048813 | 199 | 0.028 | |
| proteasome mediated ubiquitin dependent protein catabolic process | GO:0043161 | 54 | 0.027 | |
| regulation of transport | GO:0051049 | 181 | 0.026 | |
| regulation of synapse structure and activity | GO:0050803 | 128 | 0.026 | |
| regulation of mitotic cell cycle phase transition | GO:1901990 | 130 | 0.026 | |
| response to temperature stimulus | GO:0009266 | 106 | 0.026 | |
| regulation of mitotic cell cycle | GO:0007346 | 190 | 0.025 | |
| positive regulation of response to stimulus | GO:0048584 | 323 | 0.025 | |
| protein localization | GO:0008104 | 284 | 0.025 | |
| protein modification by small protein conjugation or removal | GO:0070647 | 106 | 0.025 | |
| cellular catabolic process | GO:0044248 | 372 | 0.025 | |
| macromolecule catabolic process | GO:0009057 | 161 | 0.024 | |
| cellular protein modification process | GO:0006464 | 438 | 0.024 | |
| columnar cuboidal epithelial cell differentiation | GO:0002065 | 256 | 0.024 | |
| negative regulation of intracellular signal transduction | GO:1902532 | 57 | 0.024 | |
| phagocytosis | GO:0006909 | 215 | 0.023 | |
| mitotic dna integrity checkpoint | GO:0044774 | 75 | 0.023 | |
| regulation of phosphorylation | GO:0042325 | 147 | 0.022 | |
| negative regulation of nucleobase containing compound metabolic process | GO:0045934 | 261 | 0.022 | |
| cell division | GO:0051301 | 248 | 0.021 | |
| endocytosis | GO:0006897 | 310 | 0.021 | |
| regulation of transmembrane receptor protein serine threonine kinase signaling pathway | GO:0090092 | 38 | 0.021 | |
| catabolic process | GO:0009056 | 409 | 0.021 | |
| vesicle mediated transport | GO:0016192 | 381 | 0.021 | |
| negative regulation of ras protein signal transduction | GO:0046580 | 13 | 0.021 | |
| organic substance catabolic process | GO:1901575 | 308 | 0.021 | |
| negative regulation of cellular metabolic process | GO:0031324 | 382 | 0.020 | |
| mechanosensory behavior | GO:0007638 | 12 | 0.020 | |
| peptidyl lysine modification | GO:0018205 | 57 | 0.020 | |
| cellular response to organic substance | GO:0071310 | 132 | 0.020 | |
| cell death | GO:0008219 | 279 | 0.019 | |
| regulation of catalytic activity | GO:0050790 | 185 | 0.019 | |
| cell cycle checkpoint | GO:0000075 | 95 | 0.019 | |
| regulation of transcription from rna polymerase ii promoter | GO:0006357 | 378 | 0.019 | |
| programmed cell death | GO:0012501 | 257 | 0.019 | |
| proteasome assembly | GO:0043248 | 2 | 0.019 | |
| cellular response to chemical stimulus | GO:0070887 | 199 | 0.019 | |
| regulation of proteolysis | GO:0030162 | 87 | 0.019 | |
| proteolysis involved in cellular protein catabolic process | GO:0051603 | 83 | 0.019 | |
| open tracheal system development | GO:0007424 | 204 | 0.018 | |
| negative regulation of nitrogen compound metabolic process | GO:0051172 | 265 | 0.018 | |
| epithelial cell differentiation | GO:0030855 | 322 | 0.018 | |
| mitotic nuclear division | GO:0007067 | 213 | 0.017 | |
| larval development | GO:0002164 | 104 | 0.017 | |
| transcription from rna polymerase ii promoter | GO:0006366 | 368 | 0.017 | |
| wing disc morphogenesis | GO:0007472 | 344 | 0.017 | |
| imaginal disc derived appendage morphogenesis | GO:0035114 | 395 | 0.017 | |
| negative regulation of transmembrane receptor protein serine threonine kinase signaling pathway | GO:0090101 | 18 | 0.017 | |
| epiboly | GO:0090504 | 2 | 0.017 | |
| positive regulation of macromolecule biosynthetic process | GO:0010557 | 283 | 0.017 | |
| regulation of meiosis | GO:0040020 | 3 | 0.017 | |
| positive regulation of phosphorus metabolic process | GO:0010562 | 139 | 0.017 | |
| morphogenesis of an epithelium | GO:0002009 | 276 | 0.017 | |
| establishment of localization in cell | GO:0051649 | 402 | 0.016 | |
| regulation of synapse assembly | GO:0051963 | 94 | 0.016 | |
| posttranscriptional gene silencing by rna | GO:0035194 | 45 | 0.016 | |
| actin cytoskeleton organization | GO:0030036 | 206 | 0.016 | |
| positive regulation of cell communication | GO:0010647 | 250 | 0.016 | |
| regulation of protein metabolic process | GO:0051246 | 256 | 0.016 | |
| meiotic nuclear division | GO:0007126 | 151 | 0.016 | |
| wnt signaling pathway | GO:0016055 | 98 | 0.016 | |
| ovarian follicle cell development | GO:0030707 | 248 | 0.016 | |
| metal ion transport | GO:0030001 | 74 | 0.016 | |
| camera type eye development | GO:0043010 | 4 | 0.016 | |
| protein secretion | GO:0009306 | 45 | 0.016 | |
| negative regulation of phosphorus metabolic process | GO:0010563 | 45 | 0.016 | |
| cation homeostasis | GO:0055080 | 51 | 0.015 | |
| cell cycle comprising mitosis without cytokinesis | GO:0033301 | 25 | 0.015 | |
| positive regulation of apoptotic signaling pathway | GO:2001235 | 4 | 0.015 | |
| regulation of behavior | GO:0050795 | 75 | 0.015 | |
| negative regulation of protein metabolic process | GO:0051248 | 85 | 0.015 | |
| appendage morphogenesis | GO:0035107 | 397 | 0.015 | |
| positive regulation of intracellular signal transduction | GO:1902533 | 116 | 0.015 | |
| mitotic cell cycle phase transition | GO:0044772 | 138 | 0.014 | |
| sensory organ morphogenesis | GO:0090596 | 260 | 0.014 | |
| sensory perception of mechanical stimulus | GO:0050954 | 72 | 0.014 | |
| rna polymerase ii transcriptional preinitiation complex assembly | GO:0051123 | 20 | 0.014 | |
| spermatogenesis | GO:0007283 | 200 | 0.014 | |
| negative regulation of cellular macromolecule biosynthetic process | GO:2000113 | 267 | 0.014 | |
| regulation of phosphorus metabolic process | GO:0051174 | 210 | 0.014 | |
| regulation of mapk cascade | GO:0043408 | 92 | 0.014 | |
| multi organism behavior | GO:0051705 | 175 | 0.014 | |
| proteasomal protein catabolic process | GO:0010498 | 59 | 0.014 | |
| respiratory system development | GO:0060541 | 213 | 0.013 | |
| cell cell signaling involved in cell fate commitment | GO:0045168 | 210 | 0.013 | |
| protein modification by small protein conjugation | GO:0032446 | 79 | 0.013 | |
| regulation of cellular localization | GO:0060341 | 136 | 0.013 | |
| mitotic dna damage checkpoint | GO:0044773 | 74 | 0.013 | |
| male meiosis | GO:0007140 | 52 | 0.013 | |
| neurological system process | GO:0050877 | 358 | 0.013 | |
| compound eye photoreceptor cell differentiation | GO:0001751 | 140 | 0.013 | |
| taxis | GO:0042330 | 304 | 0.013 | |
| sensory perception of pain | GO:0019233 | 4 | 0.013 | |
| regulation of phosphate metabolic process | GO:0019220 | 210 | 0.013 | |
| monovalent inorganic cation homeostasis | GO:0055067 | 7 | 0.012 | |
| cell cycle phase transition | GO:0044770 | 140 | 0.012 | |
| regulation of programmed cell death | GO:0043067 | 152 | 0.012 | |
| regulation of wnt signaling pathway | GO:0030111 | 68 | 0.012 | |
| positive regulation of transcription dna templated | GO:0045893 | 266 | 0.012 | |
| negative regulation of gene expression | GO:0010629 | 387 | 0.012 | |
| g2 dna damage checkpoint | GO:0031572 | 69 | 0.012 | |
| regulation of cell differentiation | GO:0045595 | 302 | 0.012 | |
| negative regulation of cell cycle phase transition | GO:1901988 | 103 | 0.011 | |
| regulation of response to stress | GO:0080134 | 200 | 0.011 | |
| protein maturation | GO:0051604 | 71 | 0.011 | |
| photoreceptor cell development | GO:0042461 | 96 | 0.011 | |
| regulation of molecular function | GO:0065009 | 217 | 0.011 | |
| cellular macromolecule catabolic process | GO:0044265 | 136 | 0.011 | |
| regulation of erbb signaling pathway | GO:1901184 | 42 | 0.011 | |
| detection of mechanical stimulus involved in sensory perception of pain | GO:0050966 | 2 | 0.011 | |
| ubiquitin dependent protein catabolic process | GO:0006511 | 78 | 0.011 | |
| negative regulation of rna biosynthetic process | GO:1902679 | 240 | 0.011 | |
| protein transport | GO:0015031 | 155 | 0.011 | |
| mesenchymal cell development | GO:0014031 | 1 | 0.011 | |
| apoptotic process | GO:0006915 | 159 | 0.011 | |
| mesenchymal cell differentiation | GO:0048762 | 1 | 0.011 | |
| mitotic g2 m transition checkpoint | GO:0044818 | 70 | 0.011 | |
| positive regulation of nucleobase containing compound metabolic process | GO:0045935 | 332 | 0.011 | |
| cognition | GO:0050890 | 141 | 0.011 | |
| internal protein amino acid acetylation | GO:0006475 | 38 | 0.010 | |
| internal peptidyl lysine acetylation | GO:0018393 | 38 | 0.010 | |
| chromosome organization | GO:0051276 | 360 | 0.010 | |
| negative regulation of mitotic cell cycle | GO:0045930 | 109 | 0.010 | |
| ameboidal type cell migration | GO:0001667 | 151 | 0.010 | |
| regulation of cell cycle phase transition | GO:1901987 | 130 | 0.010 | |
| membrane organization | GO:0061024 | 112 | 0.010 | |
| protein ubiquitination | GO:0016567 | 70 | 0.010 | |