| chromosome organization | GO:0051276 | 360 | 0.671 | |
| protein dna complex subunit organization | GO:0071824 | 86 | 0.344 | |
| negative regulation of nucleobase containing compound metabolic process | GO:0045934 | 261 | 0.331 | |
| transcription from rna polymerase ii promoter | GO:0006366 | 368 | 0.300 | |
| positive regulation of rna metabolic process | GO:0051254 | 271 | 0.261 | |
| negative regulation of cellular biosynthetic process | GO:0031327 | 277 | 0.244 | |
| protein complex assembly | GO:0006461 | 200 | 0.234 | |
| positive regulation of macromolecule biosynthetic process | GO:0010557 | 283 | 0.220 | |
| macromolecular complex assembly | GO:0065003 | 256 | 0.218 | |
| chromatin organization | GO:0006325 | 207 | 0.213 | |
| cellular protein modification process | GO:0006464 | 438 | 0.202 | |
| regulation of transcription from rna polymerase ii promoter | GO:0006357 | 378 | 0.198 | |
| positive regulation of transcription dna templated | GO:0045893 | 266 | 0.178 | |
| positive regulation of cellular biosynthetic process | GO:0031328 | 316 | 0.166 | |
| positive regulation of nucleic acid templated transcription | GO:1903508 | 266 | 0.156 | |
| negative regulation of macromolecule biosynthetic process | GO:0010558 | 270 | 0.154 | |
| chromatin modification | GO:0016568 | 147 | 0.153 | |
| phosphorylation | GO:0016310 | 294 | 0.153 | |
| positive regulation of rna biosynthetic process | GO:1902680 | 266 | 0.149 | |
| negative regulation of nitrogen compound metabolic process | GO:0051172 | 265 | 0.148 | |
| negative regulation of cellular metabolic process | GO:0031324 | 382 | 0.147 | |
| negative regulation of rna metabolic process | GO:0051253 | 251 | 0.144 | |
| intracellular signal transduction | GO:0035556 | 300 | 0.143 | |
| protein complex biogenesis | GO:0070271 | 201 | 0.133 | |
| positive regulation of nucleobase containing compound metabolic process | GO:0045935 | 332 | 0.132 | |
| positive regulation of gene expression | GO:0010628 | 290 | 0.124 | |
| positive regulation of transcription from rna polymerase ii promoter | GO:0045944 | 204 | 0.124 | |
| negative regulation of rna biosynthetic process | GO:1902679 | 240 | 0.123 | |
| protein dna complex assembly | GO:0065004 | 63 | 0.119 | |
| regulation of intracellular signal transduction | GO:1902531 | 236 | 0.108 | |
| cellular macromolecular complex assembly | GO:0034622 | 153 | 0.105 | |
| negative regulation of cellular macromolecule biosynthetic process | GO:2000113 | 267 | 0.103 | |
| positive regulation of signaling | GO:0023056 | 243 | 0.101 | |
| histone modification | GO:0016570 | 106 | 0.095 | |
| negative regulation of nucleic acid templated transcription | GO:1903507 | 240 | 0.085 | |
| dna metabolic process | GO:0006259 | 227 | 0.085 | |
| positive regulation of signal transduction | GO:0009967 | 223 | 0.084 | |
| positive regulation of cell communication | GO:0010647 | 250 | 0.084 | |
| covalent chromatin modification | GO:0016569 | 106 | 0.084 | |
| regulation of small gtpase mediated signal transduction | GO:0051056 | 93 | 0.082 | |
| regulation of mapk cascade | GO:0043408 | 92 | 0.080 | |
| negative regulation of transcription dna templated | GO:0045892 | 237 | 0.074 | |
| regulation of response to stress | GO:0080134 | 200 | 0.073 | |
| signal transduction by phosphorylation | GO:0023014 | 107 | 0.073 | |
| dna templated transcription initiation | GO:0006352 | 25 | 0.069 | |
| positive regulation of response to stimulus | GO:0048584 | 323 | 0.069 | |
| cellular catabolic process | GO:0044248 | 372 | 0.068 | |
| dna conformation change | GO:0071103 | 105 | 0.068 | |
| mrna metabolic process | GO:0016071 | 124 | 0.067 | |
| nuclear division | GO:0000280 | 332 | 0.065 | |
| regulation of multicellular organismal development | GO:2000026 | 414 | 0.064 | |
| negative regulation of biosynthetic process | GO:0009890 | 277 | 0.063 | |
| negative regulation of gene expression | GO:0010629 | 387 | 0.062 | |
| immune system process | GO:0002376 | 347 | 0.062 | |
| protein modification process | GO:0036211 | 438 | 0.060 | |
| positive regulation of macromolecule metabolic process | GO:0010604 | 405 | 0.058 | |
| ras protein signal transduction | GO:0007265 | 88 | 0.056 | |
| regulation of cellular component biogenesis | GO:0044087 | 201 | 0.056 | |
| small gtpase mediated signal transduction | GO:0007264 | 88 | 0.055 | |
| regulation of phosphorylation | GO:0042325 | 147 | 0.054 | |
| regulation of gene expression epigenetic | GO:0040029 | 128 | 0.054 | |
| positive regulation of nitrogen compound metabolic process | GO:0051173 | 354 | 0.054 | |
| microtubule cytoskeleton organization involved in mitosis | GO:1902850 | 52 | 0.050 | |
| protein phosphorylation | GO:0006468 | 169 | 0.050 | |
| imaginal disc derived appendage morphogenesis | GO:0035114 | 395 | 0.047 | |
| aromatic compound catabolic process | GO:0019439 | 166 | 0.047 | |
| organelle fission | GO:0048285 | 340 | 0.047 | |
| gene silencing | GO:0016458 | 138 | 0.045 | |
| negative regulation of transcription from rna polymerase ii promoter | GO:0000122 | 119 | 0.044 | |
| positive regulation of biosynthetic process | GO:0009891 | 316 | 0.044 | |
| chromatin remodeling | GO:0006338 | 72 | 0.044 | |
| regulation of protein metabolic process | GO:0051246 | 256 | 0.043 | |
| organonitrogen compound metabolic process | GO:1901564 | 318 | 0.043 | |
| growth | GO:0040007 | 359 | 0.043 | |
| mrna processing | GO:0006397 | 104 | 0.040 | |
| imaginal disc derived appendage development | GO:0048737 | 399 | 0.039 | |
| positive regulation of phosphorylation | GO:0042327 | 87 | 0.039 | |
| regulation of phosphate metabolic process | GO:0019220 | 210 | 0.039 | |
| positive regulation of intracellular signal transduction | GO:1902533 | 116 | 0.036 | |
| oocyte differentiation | GO:0009994 | 145 | 0.035 | |
| establishment or maintenance of cell polarity | GO:0007163 | 167 | 0.035 | |
| phagocytosis | GO:0006909 | 215 | 0.035 | |
| apoptotic signaling pathway | GO:0097190 | 27 | 0.033 | |
| heterocycle catabolic process | GO:0046700 | 166 | 0.033 | |
| segmentation | GO:0035282 | 207 | 0.033 | |
| positive regulation of erk1 and erk2 cascade | GO:0070374 | 36 | 0.032 | |
| regulation of cellular ketone metabolic process | GO:0010565 | 3 | 0.032 | |
| anterior posterior pattern specification | GO:0009952 | 136 | 0.031 | |
| rna polymerase ii transcriptional preinitiation complex assembly | GO:0051123 | 20 | 0.031 | |
| appendage morphogenesis | GO:0035107 | 397 | 0.030 | |
| axonogenesis | GO:0007409 | 290 | 0.030 | |
| erk1 and erk2 cascade | GO:0070371 | 39 | 0.029 | |
| regulation of cellular protein metabolic process | GO:0032268 | 243 | 0.028 | |
| mapk cascade | GO:0000165 | 107 | 0.028 | |
| localization of cell | GO:0051674 | 257 | 0.028 | |
| nucleoside catabolic process | GO:0009164 | 112 | 0.028 | |
| regulation of phosphorus metabolic process | GO:0051174 | 210 | 0.027 | |
| regulation of cellular amino acid metabolic process | GO:0006521 | 0 | 0.027 | |
| small molecule metabolic process | GO:0044281 | 305 | 0.026 | |
| cellular response to dna damage stimulus | GO:0006974 | 223 | 0.026 | |
| cellular amine metabolic process | GO:0044106 | 12 | 0.026 | |
| regulation of molecular function | GO:0065009 | 217 | 0.026 | |
| macromolecule methylation | GO:0043414 | 45 | 0.026 | |
| mitotic nuclear division | GO:0007067 | 213 | 0.026 | |
| organic substance catabolic process | GO:1901575 | 308 | 0.025 | |
| methylation | GO:0032259 | 47 | 0.025 | |
| peptidyl amino acid modification | GO:0018193 | 105 | 0.025 | |
| regulation of cellular amine metabolic process | GO:0033238 | 3 | 0.025 | |
| dna alkylation | GO:0006305 | 4 | 0.024 | |
| regulation of ras protein signal transduction | GO:0046578 | 93 | 0.024 | |
| regulation of cell differentiation | GO:0045595 | 302 | 0.024 | |
| regulation of mrna processing | GO:0050684 | 71 | 0.023 | |
| regulation of catalytic activity | GO:0050790 | 185 | 0.022 | |
| protein localization | GO:0008104 | 284 | 0.022 | |
| regulation of anatomical structure morphogenesis | GO:0022603 | 242 | 0.022 | |
| epithelial cell development | GO:0002064 | 274 | 0.022 | |
| catabolic process | GO:0009056 | 409 | 0.021 | |
| purine nucleoside monophosphate metabolic process | GO:0009126 | 50 | 0.021 | |
| peptidyl lysine modification | GO:0018205 | 57 | 0.021 | |
| positive regulation of mapk cascade | GO:0043410 | 63 | 0.021 | |
| negative regulation of signaling | GO:0023057 | 219 | 0.021 | |
| regulation of localization | GO:0032879 | 275 | 0.021 | |
| post embryonic appendage morphogenesis | GO:0035120 | 385 | 0.021 | |
| epithelial cell differentiation | GO:0030855 | 322 | 0.020 | |
| positive regulation of multicellular organismal process | GO:0051240 | 143 | 0.020 | |
| negative regulation of gene expression epigenetic | GO:0045814 | 77 | 0.020 | |
| anatomical structure homeostasis | GO:0060249 | 97 | 0.020 | |
| transcription initiation from rna polymerase ii promoter | GO:0006367 | 25 | 0.020 | |
| regionalization | GO:0003002 | 416 | 0.020 | |
| regulation of cell cycle process | GO:0010564 | 181 | 0.019 | |
| rna processing | GO:0006396 | 147 | 0.019 | |
| tissue morphogenesis | GO:0048729 | 297 | 0.019 | |
| atp catabolic process | GO:0006200 | 38 | 0.019 | |
| negative regulation of cell cycle | GO:0045786 | 116 | 0.019 | |
| chromatin silencing | GO:0006342 | 76 | 0.019 | |
| purine ribonucleoside triphosphate metabolic process | GO:0009205 | 119 | 0.018 | |
| cell division | GO:0051301 | 248 | 0.018 | |
| nucleoside monophosphate metabolic process | GO:0009123 | 52 | 0.018 | |
| regulation of cellular response to stress | GO:0080135 | 89 | 0.018 | |
| atp metabolic process | GO:0046034 | 49 | 0.018 | |
| protein alkylation | GO:0008213 | 43 | 0.018 | |
| gland development | GO:0048732 | 191 | 0.018 | |
| purine ribonucleoside monophosphate catabolic process | GO:0009169 | 38 | 0.018 | |
| embryonic pattern specification | GO:0009880 | 174 | 0.018 | |
| embryonic axis specification | GO:0000578 | 107 | 0.018 | |
| appendage development | GO:0048736 | 401 | 0.017 | |
| purine nucleoside monophosphate catabolic process | GO:0009128 | 38 | 0.017 | |
| negative regulation of response to stimulus | GO:0048585 | 258 | 0.017 | |
| negative regulation of developmental process | GO:0051093 | 201 | 0.017 | |
| nucleobase containing compound catabolic process | GO:0034655 | 165 | 0.017 | |
| cell proliferation | GO:0008283 | 299 | 0.017 | |
| dendrite development | GO:0016358 | 204 | 0.016 | |
| single organism behavior | GO:0044708 | 391 | 0.016 | |
| blastoderm segmentation | GO:0007350 | 159 | 0.016 | |
| protein acylation | GO:0043543 | 42 | 0.016 | |
| oxoacid metabolic process | GO:0043436 | 103 | 0.016 | |
| glycosyl compound metabolic process | GO:1901657 | 127 | 0.016 | |
| purine ribonucleoside monophosphate metabolic process | GO:0009167 | 50 | 0.016 | |
| ribonucleoside monophosphate catabolic process | GO:0009158 | 39 | 0.016 | |
| cellular protein complex assembly | GO:0043623 | 71 | 0.015 | |
| histone lysine methylation | GO:0034968 | 32 | 0.015 | |
| organic cyclic compound catabolic process | GO:1901361 | 168 | 0.015 | |
| positive regulation of phosphorus metabolic process | GO:0010562 | 139 | 0.015 | |
| carbohydrate derivative metabolic process | GO:1901135 | 217 | 0.015 | |
| camera type eye development | GO:0043010 | 4 | 0.015 | |
| dna methylation | GO:0006306 | 4 | 0.015 | |
| tripartite regional subdivision | GO:0007351 | 103 | 0.015 | |
| dna templated transcriptional preinitiation complex assembly | GO:0070897 | 20 | 0.015 | |
| death | GO:0016265 | 284 | 0.015 | |
| spindle organization | GO:0007051 | 253 | 0.015 | |
| response to organic substance | GO:0010033 | 284 | 0.015 | |
| cell migration | GO:0016477 | 238 | 0.015 | |
| homeostatic process | GO:0042592 | 199 | 0.015 | |
| dna packaging | GO:0006323 | 91 | 0.014 | |
| centrosome organization | GO:0051297 | 163 | 0.014 | |
| imaginal disc derived wing morphogenesis | GO:0007476 | 337 | 0.014 | |
| positive regulation of phosphate metabolic process | GO:0045937 | 139 | 0.014 | |
| carboxylic acid metabolic process | GO:0019752 | 92 | 0.014 | |
| enzyme linked receptor protein signaling pathway | GO:0007167 | 179 | 0.013 | |
| wing disc morphogenesis | GO:0007472 | 344 | 0.013 | |
| positive regulation of cellular component organization | GO:0051130 | 156 | 0.013 | |
| regulation of organelle organization | GO:0033043 | 196 | 0.013 | |
| regulation of cell cycle | GO:0051726 | 291 | 0.013 | |
| regulation of erk1 and erk2 cascade | GO:0070372 | 39 | 0.013 | |
| negative regulation of signal transduction | GO:0009968 | 206 | 0.013 | |
| cellular amino acid metabolic process | GO:0006520 | 61 | 0.013 | |
| negative regulation of transcription factor import into nucleus | GO:0042992 | 4 | 0.013 | |
| nucleoside triphosphate catabolic process | GO:0009143 | 108 | 0.013 | |
| production of molecular mediator of immune response | GO:0002440 | 46 | 0.013 | |
| cellular nitrogen compound catabolic process | GO:0044270 | 165 | 0.013 | |
| histone methylation | GO:0016571 | 40 | 0.013 | |
| endocytosis | GO:0006897 | 310 | 0.013 | |
| body morphogenesis | GO:0010171 | 2 | 0.012 | |
| cellular response to chemical stimulus | GO:0070887 | 199 | 0.012 | |
| purine ribonucleoside triphosphate catabolic process | GO:0009207 | 108 | 0.012 | |
| axon guidance | GO:0007411 | 233 | 0.012 | |
| eggshell formation | GO:0030703 | 105 | 0.012 | |
| negative regulation of erk1 and erk2 cascade | GO:0070373 | 3 | 0.012 | |
| nucleotide metabolic process | GO:0009117 | 161 | 0.012 | |
| cellular macromolecule localization | GO:0070727 | 220 | 0.012 | |
| negative regulation of cell cycle process | GO:0010948 | 109 | 0.012 | |
| dephosphorylation | GO:0016311 | 51 | 0.012 | |
| columnar cuboidal epithelial cell development | GO:0002066 | 249 | 0.012 | |
| axon development | GO:0061564 | 297 | 0.012 | |
| single organism nuclear import | GO:1902593 | 51 | 0.012 | |
| chromosome segregation | GO:0007059 | 157 | 0.012 | |
| taxis | GO:0042330 | 304 | 0.012 | |
| cellular protein localization | GO:0034613 | 160 | 0.011 | |
| regulation of mitotic cell cycle | GO:0007346 | 190 | 0.011 | |
| mitotic spindle organization | GO:0007052 | 220 | 0.011 | |
| response to oxidative stress | GO:0006979 | 86 | 0.011 | |
| anterior posterior axis specification | GO:0009948 | 109 | 0.011 | |
| regulation of organ morphogenesis | GO:2000027 | 78 | 0.011 | |
| positive regulation of protein metabolic process | GO:0051247 | 128 | 0.011 | |
| nucleosome organization | GO:0034728 | 59 | 0.011 | |
| anterior posterior axis specification embryo | GO:0008595 | 103 | 0.011 | |
| microtubule organizing center organization | GO:0031023 | 168 | 0.011 | |
| regulation of transcription by chromatin organization | GO:0034401 | 3 | 0.011 | |
| negative regulation of mitotic cell cycle phase transition | GO:1901991 | 103 | 0.011 | |
| terminal region determination | GO:0007362 | 25 | 0.011 | |
| ribonucleoside monophosphate metabolic process | GO:0009161 | 51 | 0.011 | |
| tube morphogenesis | GO:0035239 | 191 | 0.011 | |
| mitotic sister chromatid segregation | GO:0000070 | 87 | 0.011 | |
| purine nucleoside metabolic process | GO:0042278 | 127 | 0.011 | |
| response to abiotic stimulus | GO:0009628 | 341 | 0.011 | |
| positive regulation of cellular component biogenesis | GO:0044089 | 80 | 0.010 | |
| positive regulation of small gtpase mediated signal transduction | GO:0051057 | 43 | 0.010 | |
| organic acid metabolic process | GO:0006082 | 103 | 0.010 | |
| regulation of protein modification process | GO:0031399 | 112 | 0.010 | |
| locomotory behavior | GO:0007626 | 176 | 0.010 | |
| morphogenesis of an epithelium | GO:0002009 | 276 | 0.010 | |