| establishment of localization in cell | GO:0051649 | 402 | 0.209 | |
| regulation of localization | GO:0032879 | 275 | 0.173 | |
| protein localization | GO:0008104 | 284 | 0.166 | |
| protein modification process | GO:0036211 | 438 | 0.107 | |
| establishment of protein localization | GO:0045184 | 163 | 0.106 | |
| response to topologically incorrect protein | GO:0035966 | 10 | 0.095 | |
| response to abiotic stimulus | GO:0009628 | 341 | 0.073 | |
| organic substance transport | GO:0071702 | 257 | 0.071 | |
| cellular protein modification process | GO:0006464 | 438 | 0.067 | |
| vesicle mediated transport | GO:0016192 | 381 | 0.059 | |
| protein transport | GO:0015031 | 155 | 0.054 | |
| secretion by cell | GO:0032940 | 101 | 0.051 | |
| positive regulation of transport | GO:0051050 | 92 | 0.050 | |
| regulation of transport | GO:0051049 | 181 | 0.047 | |
| peptidyl amino acid modification | GO:0018193 | 105 | 0.045 | |
| response to unfolded protein | GO:0006986 | 9 | 0.042 | |
| single organism behavior | GO:0044708 | 391 | 0.039 | |
| single organism intracellular transport | GO:1902582 | 207 | 0.037 | |
| regulation of intracellular signal transduction | GO:1902531 | 236 | 0.036 | |
| cellular catabolic process | GO:0044248 | 372 | 0.035 | Mouse |
| cellular amino acid metabolic process | GO:0006520 | 61 | 0.035 | |
| neurological system process | GO:0050877 | 358 | 0.035 | |
| secretion | GO:0046903 | 109 | 0.034 | |
| endocytosis | GO:0006897 | 310 | 0.032 | |
| response to organic substance | GO:0010033 | 284 | 0.031 | |
| meiotic cell cycle process | GO:1903046 | 132 | 0.030 | |
| regulation of lipid storage | GO:0010883 | 22 | 0.029 | |
| carboxylic acid metabolic process | GO:0019752 | 92 | 0.027 | |
| maintenance of location | GO:0051235 | 73 | 0.027 | |
| positive regulation of response to stimulus | GO:0048584 | 323 | 0.027 | |
| single organism carbohydrate metabolic process | GO:0044723 | 72 | 0.027 | |
| small molecule metabolic process | GO:0044281 | 305 | 0.027 | |
| positive regulation of transcription from rna polymerase ii promoter | GO:0045944 | 204 | 0.027 | |
| intracellular signal transduction | GO:0035556 | 300 | 0.026 | |
| cellular response to chemical stimulus | GO:0070887 | 199 | 0.026 | |
| glycoprotein biosynthetic process | GO:0009101 | 41 | 0.025 | |
| male meiosis cytokinesis | GO:0007112 | 26 | 0.024 | |
| response to decreased oxygen levels | GO:0036293 | 58 | 0.024 | |
| regionalization | GO:0003002 | 416 | 0.024 | |
| phagocytosis | GO:0006909 | 215 | 0.023 | |
| cellular protein localization | GO:0034613 | 160 | 0.023 | |
| response to biotic stimulus | GO:0009607 | 294 | 0.023 | |
| adult behavior | GO:0030534 | 137 | 0.023 | |
| organonitrogen compound metabolic process | GO:1901564 | 318 | 0.022 | |
| cellular response to unfolded protein | GO:0034620 | 9 | 0.022 | |
| response to bacterium | GO:0009617 | 198 | 0.022 | |
| cytoplasmic transport | GO:0016482 | 130 | 0.022 | |
| open tracheal system development | GO:0007424 | 204 | 0.022 | |
| regulation of vesicle mediated transport | GO:0060627 | 59 | 0.022 | |
| mrna metabolic process | GO:0016071 | 124 | 0.021 | |
| protein glycosylation | GO:0006486 | 32 | 0.020 | |
| positive regulation of cellular component organization | GO:0051130 | 156 | 0.020 | |
| cellular macromolecule localization | GO:0070727 | 220 | 0.020 | |
| intracellular protein transport | GO:0006886 | 104 | 0.020 | |
| carbohydrate metabolic process | GO:0005975 | 82 | 0.019 | |
| lipid storage | GO:0019915 | 38 | 0.019 | |
| dorsal ventral pattern formation | GO:0009953 | 133 | 0.019 | |
| carbohydrate derivative biosynthetic process | GO:1901137 | 85 | 0.018 | |
| intracellular transport | GO:0046907 | 228 | 0.018 | |
| lipid localization | GO:0010876 | 54 | 0.017 | |
| transcription from rna polymerase ii promoter | GO:0006366 | 368 | 0.017 | |
| oxoacid metabolic process | GO:0043436 | 103 | 0.017 | |
| locomotory behavior | GO:0007626 | 176 | 0.017 | |
| carbohydrate derivative metabolic process | GO:1901135 | 217 | 0.017 | |
| response to starvation | GO:0042594 | 97 | 0.016 | |
| response to hypoxia | GO:0001666 | 53 | 0.016 | |
| synaptic transmission | GO:0007268 | 288 | 0.016 | |
| regulation of cell differentiation | GO:0045595 | 302 | 0.016 | |
| programmed cell death | GO:0012501 | 257 | 0.016 | |
| protein secretion | GO:0009306 | 45 | 0.016 | |
| organic acid metabolic process | GO:0006082 | 103 | 0.015 | |
| cell motility | GO:0048870 | 251 | 0.015 | |
| golgi organization | GO:0007030 | 66 | 0.015 | |
| cellular response to topologically incorrect protein | GO:0035967 | 10 | 0.015 | |
| golgi vesicle transport | GO:0048193 | 27 | 0.015 | |
| positive regulation of rna biosynthetic process | GO:1902680 | 266 | 0.015 | |
| positive regulation of transcription dna templated | GO:0045893 | 266 | 0.015 | |
| tube morphogenesis | GO:0035239 | 191 | 0.015 | |
| peptidyl proline hydroxylation | GO:0019511 | 1 | 0.015 | |
| protein localization to organelle | GO:0033365 | 82 | 0.015 | |
| death | GO:0016265 | 284 | 0.014 | |
| positive regulation of signal transduction | GO:0009967 | 223 | 0.014 | |
| urogenital system development | GO:0001655 | 72 | 0.014 | |
| response to other organism | GO:0051707 | 293 | 0.014 | |
| glycoprotein metabolic process | GO:0009100 | 41 | 0.014 | |
| olfactory behavior | GO:0042048 | 97 | 0.014 | |
| regulation of cell development | GO:0060284 | 215 | 0.014 | |
| catabolic process | GO:0009056 | 409 | 0.013 | Mouse |
| endomembrane system organization | GO:0010256 | 119 | 0.013 | |
| er associated ubiquitin dependent protein catabolic process | GO:0030433 | 3 | 0.013 | |
| regulation of cellular localization | GO:0060341 | 136 | 0.013 | |
| single organism membrane organization | GO:0044802 | 93 | 0.013 | |
| localization of cell | GO:0051674 | 257 | 0.013 | |
| apoptotic cell clearance | GO:0043277 | 14 | 0.013 | |
| response to oxygen levels | GO:0070482 | 59 | 0.013 | |
| cellular response to organic substance | GO:0071310 | 132 | 0.013 | |
| defense response to bacterium | GO:0042742 | 178 | 0.013 | |
| positive regulation of biosynthetic process | GO:0009891 | 316 | 0.012 | |
| cellular response to lipopolysaccharide | GO:0071222 | 3 | 0.012 | |
| olfactory learning | GO:0008355 | 56 | 0.012 | |
| negative regulation of cell communication | GO:0010648 | 223 | 0.012 | |
| regulation of transcription from rna polymerase ii promoter | GO:0006357 | 378 | 0.012 | |
| larval development | GO:0002164 | 104 | 0.012 | |
| camera type eye development | GO:0043010 | 4 | 0.012 | |
| cell death | GO:0008219 | 279 | 0.012 | |
| wing disc morphogenesis | GO:0007472 | 344 | 0.012 | |
| positive regulation of nitrogen compound metabolic process | GO:0051173 | 354 | 0.012 | |
| homeostatic process | GO:0042592 | 199 | 0.012 | |
| regulation of tube size open tracheal system | GO:0035151 | 43 | 0.012 | |
| negative regulation of cell development | GO:0010721 | 62 | 0.012 | |
| gland development | GO:0048732 | 191 | 0.012 | |
| proteasomal protein catabolic process | GO:0010498 | 59 | 0.011 | |
| muscle structure development | GO:0061061 | 224 | 0.011 | |
| positive regulation of cell communication | GO:0010647 | 250 | 0.011 | |
| response to oxygen containing compound | GO:1901700 | 200 | 0.011 | |
| developmental maturation | GO:0021700 | 172 | 0.011 | |
| regulation of catalytic activity | GO:0050790 | 185 | 0.011 | |
| regulation of secretion | GO:0051046 | 44 | 0.011 | |
| o glycan processing | GO:0016266 | 3 | 0.011 | |
| regulation of phosphate metabolic process | GO:0019220 | 210 | 0.011 | |
| cellular response to external stimulus | GO:0071496 | 66 | 0.011 | |
| regulation of protein secretion | GO:0050708 | 13 | 0.011 | |
| regulation of response to stress | GO:0080134 | 200 | 0.011 | |
| oocyte differentiation | GO:0009994 | 145 | 0.011 | |
| regulation of multicellular organismal development | GO:2000026 | 414 | 0.011 | |
| regulation of cellular catabolic process | GO:0031329 | 157 | 0.011 | |
| positive regulation of cell motility | GO:2000147 | 3 | 0.010 | |
| regulation of molecular function | GO:0065009 | 217 | 0.010 | |
| membrane organization | GO:0061024 | 112 | 0.010 | |
| regulation of protein transport | GO:0051223 | 57 | 0.010 | |
| nucleobase containing small molecule metabolic process | GO:0055086 | 174 | 0.010 | |
| response to lipopolysaccharide | GO:0032496 | 4 | 0.010 | |
| cellular response to biotic stimulus | GO:0071216 | 4 | 0.010 | |
| organic substance catabolic process | GO:1901575 | 308 | 0.010 | Mouse |
| axonogenesis | GO:0007409 | 290 | 0.010 | |
| embryonic organ development | GO:0048568 | 50 | 0.010 | |
