| rna processing | GO:0006396 | 147 | 0.241 | |
| organelle assembly | GO:0070925 | 198 | 0.195 | Yeast |
| tissue morphogenesis | GO:0048729 | 297 | 0.143 | |
| negative regulation of cellular metabolic process | GO:0031324 | 382 | 0.135 | Mouse |
| regulation of protein metabolic process | GO:0051246 | 256 | 0.114 | Mouse |
| regulation of multicellular organismal development | GO:2000026 | 414 | 0.097 | |
| cell division | GO:0051301 | 248 | 0.094 | |
| regulation of anatomical structure morphogenesis | GO:0022603 | 242 | 0.086 | |
| ribosomal large subunit biogenesis | GO:0042273 | 1 | 0.080 | Yeast Mouse |
| protein modification process | GO:0036211 | 438 | 0.076 | |
| catabolic process | GO:0009056 | 409 | 0.073 | |
| organic substance catabolic process | GO:1901575 | 308 | 0.072 | |
| phosphorylation | GO:0016310 | 294 | 0.072 | |
| regulation of cellular protein metabolic process | GO:0032268 | 243 | 0.069 | Mouse |
| organelle fission | GO:0048285 | 340 | 0.065 | |
| cellular component assembly involved in morphogenesis | GO:0010927 | 151 | 0.061 | |
| axon development | GO:0061564 | 297 | 0.052 | |
| cell motility | GO:0048870 | 251 | 0.051 | |
| cellular catabolic process | GO:0044248 | 372 | 0.047 | |
| macromolecular complex assembly | GO:0065003 | 256 | 0.046 | Yeast |
| positive regulation of macromolecule metabolic process | GO:0010604 | 405 | 0.045 | |
| regulation of response to stress | GO:0080134 | 200 | 0.045 | |
| establishment or maintenance of cell polarity | GO:0007163 | 167 | 0.044 | |
| organonitrogen compound metabolic process | GO:1901564 | 318 | 0.041 | |
| cell migration | GO:0016477 | 238 | 0.040 | |
| cellular protein modification process | GO:0006464 | 438 | 0.040 | |
| localization of cell | GO:0051674 | 257 | 0.039 | |
| establishment of tissue polarity | GO:0007164 | 87 | 0.038 | |
| endocytosis | GO:0006897 | 310 | 0.038 | Worm |
| response to bacterium | GO:0009617 | 198 | 0.038 | |
| vesicle mediated transport | GO:0016192 | 381 | 0.037 | Worm |
| protein complex assembly | GO:0006461 | 200 | 0.037 | |
| notch signaling pathway | GO:0007219 | 120 | 0.037 | Mouse |
| small molecule metabolic process | GO:0044281 | 305 | 0.037 | |
| regulation of cyclin dependent protein serine threonine kinase activity | GO:0000079 | 3 | 0.035 | |
| organic substance transport | GO:0071702 | 257 | 0.035 | |
| cell proliferation | GO:0008283 | 299 | 0.034 | |
| rrna processing | GO:0006364 | 3 | 0.034 | |
| regulation of phosphate metabolic process | GO:0019220 | 210 | 0.032 | |
| rna methylation | GO:0001510 | 2 | 0.032 | |
| morphogenesis of an epithelium | GO:0002009 | 276 | 0.032 | |
| ncrna metabolic process | GO:0034660 | 43 | 0.031 | |
| protein phosphorylation | GO:0006468 | 169 | 0.030 | |
| regulation of phosphorus metabolic process | GO:0051174 | 210 | 0.030 | |
| regulation of molecular function | GO:0065009 | 217 | 0.030 | Mouse |
| carboxylic acid metabolic process | GO:0019752 | 92 | 0.029 | |
| positive regulation of rna metabolic process | GO:0051254 | 271 | 0.029 | |
| wing disc morphogenesis | GO:0007472 | 344 | 0.029 | |
| purine ribonucleoside monophosphate metabolic process | GO:0009167 | 50 | 0.028 | |
| larval development | GO:0002164 | 104 | 0.028 | Worm |
| negative regulation of gene expression | GO:0010629 | 387 | 0.028 | Mouse |
| positive regulation of cellular biosynthetic process | GO:0031328 | 316 | 0.027 | |
| regulation of mitotic cell cycle | GO:0007346 | 190 | 0.027 | Mouse |
| regulation of transport | GO:0051049 | 181 | 0.027 | |
| protein complex biogenesis | GO:0070271 | 201 | 0.027 | |
| regulation of nervous system development | GO:0051960 | 248 | 0.026 | |
| regulation of phosphorylation | GO:0042325 | 147 | 0.026 | |
| axonogenesis | GO:0007409 | 290 | 0.025 | |
| camera type eye development | GO:0043010 | 4 | 0.024 | |
| nuclear export | GO:0051168 | 24 | 0.024 | |
| morphogenesis of a polarized epithelium | GO:0001738 | 93 | 0.024 | |
| body morphogenesis | GO:0010171 | 2 | 0.024 | |
| actin cytoskeleton organization | GO:0030036 | 206 | 0.024 | |
| single organism catabolic process | GO:0044712 | 228 | 0.024 | |
| cytoplasmic transport | GO:0016482 | 130 | 0.023 | |
| negative regulation of biosynthetic process | GO:0009890 | 277 | 0.023 | |
| positive regulation of response to stimulus | GO:0048584 | 323 | 0.023 | Mouse |
| positive regulation of gene expression | GO:0010628 | 290 | 0.023 | |
| protein localization | GO:0008104 | 284 | 0.022 | |
| negative regulation of macromolecule biosynthetic process | GO:0010558 | 270 | 0.022 | |
| purine ribonucleoside triphosphate metabolic process | GO:0009205 | 119 | 0.022 | |
| phagocytosis | GO:0006909 | 215 | 0.022 | |
| embryo development ending in birth or egg hatching | GO:0009792 | 152 | 0.021 | Mouse |
| negative regulation of nucleic acid templated transcription | GO:1903507 | 240 | 0.021 | |
| ribose phosphate metabolic process | GO:0019693 | 145 | 0.021 | |
| protein prenylation | GO:0018342 | 3 | 0.021 | |
| regulation of programmed cell death | GO:0043067 | 152 | 0.020 | Mouse |
| negative regulation of rna biosynthetic process | GO:1902679 | 240 | 0.020 | |
| actin filament based process | GO:0030029 | 220 | 0.020 | |
| defense response to bacterium | GO:0042742 | 178 | 0.020 | |
| regulation of protein modification process | GO:0031399 | 112 | 0.020 | |
| dendrite development | GO:0016358 | 204 | 0.019 | |
| chromosome organization | GO:0051276 | 360 | 0.019 | |
| regulation of cell development | GO:0060284 | 215 | 0.019 | |
| regulation of organelle organization | GO:0033043 | 196 | 0.019 | |
| negative regulation of nitrogen compound metabolic process | GO:0051172 | 265 | 0.019 | |
| positive regulation of cell cycle process | GO:0090068 | 28 | 0.019 | |
| hindbrain development | GO:0030902 | 2 | 0.019 | |
| organic acid metabolic process | GO:0006082 | 103 | 0.019 | |
| cellular nitrogen compound catabolic process | GO:0044270 | 165 | 0.018 | |
| negative regulation of rna metabolic process | GO:0051253 | 251 | 0.018 | |
| establishment of protein localization | GO:0045184 | 163 | 0.018 | |
| epidermal cell differentiation | GO:0009913 | 51 | 0.018 | |
| oxidation reduction process | GO:0055114 | 123 | 0.018 | |
| regulation of cell division | GO:0051302 | 72 | 0.018 | |
| cellular macromolecular complex assembly | GO:0034622 | 153 | 0.018 | Yeast |
| macromolecule catabolic process | GO:0009057 | 161 | 0.018 | |
| neuromuscular junction development | GO:0007528 | 149 | 0.018 | |
| transcription from rna polymerase ii promoter | GO:0006366 | 368 | 0.018 | |
| organelle localization | GO:0051640 | 148 | 0.018 | |
| positive regulation of nitrogen compound metabolic process | GO:0051173 | 354 | 0.018 | |
| skeletal muscle fiber development | GO:0048741 | 3 | 0.018 | |
| cellular amino acid metabolic process | GO:0006520 | 61 | 0.017 | |
| positive regulation of cell communication | GO:0010647 | 250 | 0.017 | Mouse |
| nuclear division | GO:0000280 | 332 | 0.017 | |
| purine containing compound catabolic process | GO:0072523 | 112 | 0.017 | |
| positive regulation of histone deacetylation | GO:0031065 | 2 | 0.017 | |
| snrna metabolic process | GO:0016073 | 14 | 0.017 | |
| amine metabolic process | GO:0009308 | 12 | 0.017 | |
| oxoacid metabolic process | GO:0043436 | 103 | 0.016 | |
| establishment of localization in cell | GO:0051649 | 402 | 0.016 | |
| carbohydrate derivative metabolic process | GO:1901135 | 217 | 0.016 | |
| post embryonic appendage morphogenesis | GO:0035120 | 385 | 0.016 | |
| positive regulation of multicellular organismal process | GO:0051240 | 143 | 0.016 | |
| protein transport | GO:0015031 | 155 | 0.016 | |
| regulation of cellular component size | GO:0032535 | 98 | 0.016 | |
| maintenance of protein location | GO:0045185 | 28 | 0.016 | |
| response to external biotic stimulus | GO:0043207 | 293 | 0.016 | |
| defense response | GO:0006952 | 300 | 0.016 | |
| response to other organism | GO:0051707 | 293 | 0.015 | |
| aromatic compound catabolic process | GO:0019439 | 166 | 0.015 | |
| cellular macromolecule catabolic process | GO:0044265 | 136 | 0.015 | |
| membrane organization | GO:0061024 | 112 | 0.015 | |
| dendrite morphogenesis | GO:0048813 | 199 | 0.015 | |
| cellular macromolecule localization | GO:0070727 | 220 | 0.015 | |
| ncrna processing | GO:0034470 | 30 | 0.015 | |
| trna modification | GO:0006400 | 2 | 0.015 | |
| establishment of planar polarity | GO:0001736 | 87 | 0.015 | |
| kidney development | GO:0001822 | 3 | 0.015 | |
| purine nucleotide metabolic process | GO:0006163 | 146 | 0.015 | |
| nucleotide metabolic process | GO:0009117 | 161 | 0.015 | |
| ion transport | GO:0006811 | 145 | 0.015 | |
| establishment of cell polarity | GO:0030010 | 40 | 0.015 | |
| single organism intracellular transport | GO:1902582 | 207 | 0.015 | |
| regulation of neurogenesis | GO:0050767 | 158 | 0.014 | |
| taxis | GO:0042330 | 304 | 0.014 | |
| epidermis development | GO:0008544 | 65 | 0.014 | |
| developmental growth | GO:0048589 | 280 | 0.014 | |
| appendage morphogenesis | GO:0035107 | 397 | 0.014 | |
| proteasomal protein catabolic process | GO:0010498 | 59 | 0.014 | |
| positive regulation of rna biosynthetic process | GO:1902680 | 266 | 0.014 | |
| regulation of cell cycle process | GO:0010564 | 181 | 0.014 | |
| negative regulation of cellular biosynthetic process | GO:0031327 | 277 | 0.014 | |
| regulation of immune response | GO:0050776 | 118 | 0.014 | |
| epithelial cell differentiation | GO:0030855 | 322 | 0.014 | |
| regulation of cellular component biogenesis | GO:0044087 | 201 | 0.013 | |
| nephron morphogenesis | GO:0072028 | 3 | 0.013 | |
| organic cyclic compound catabolic process | GO:1901361 | 168 | 0.013 | |
| ribonucleoprotein complex biogenesis | GO:0022613 | 31 | 0.013 | Yeast Mouse |
| golgi organization | GO:0007030 | 66 | 0.013 | |
| regulation of protein kinase activity | GO:0045859 | 51 | 0.013 | |
| regulation of catalytic activity | GO:0050790 | 185 | 0.013 | Mouse |
| negative regulation of cellular macromolecule biosynthetic process | GO:2000113 | 267 | 0.013 | |
| actin filament organization | GO:0007015 | 126 | 0.013 | |
| regulation of localization | GO:0032879 | 275 | 0.013 | |
| digestive system development | GO:0055123 | 149 | 0.013 | |
| cellular protein complex disassembly | GO:0043624 | 35 | 0.013 | |
| cellular response to dna damage stimulus | GO:0006974 | 223 | 0.013 | |
| nuclear rna surveillance | GO:0071027 | 3 | 0.013 | |
| organophosphate metabolic process | GO:0019637 | 195 | 0.013 | |
| regulation of transferase activity | GO:0051338 | 58 | 0.013 | |
| hair cell differentiation | GO:0035315 | 47 | 0.013 | |
| heterocycle catabolic process | GO:0046700 | 166 | 0.013 | |
| positive regulation of molecular function | GO:0044093 | 136 | 0.013 | |
| rna localization | GO:0006403 | 115 | 0.013 | |
| purine ribonucleoside monophosphate catabolic process | GO:0009169 | 38 | 0.012 | |
| regulation of notch signaling pathway | GO:0008593 | 100 | 0.012 | |
| regulation of cellular localization | GO:0060341 | 136 | 0.012 | |
| positive regulation of protein deacetylation | GO:0090312 | 2 | 0.012 | |
| rna 3 end processing | GO:0031123 | 45 | 0.012 | |
| atp metabolic process | GO:0046034 | 49 | 0.012 | |
| imaginal disc derived wing morphogenesis | GO:0007476 | 337 | 0.012 | |
| regulation of immune system process | GO:0002682 | 176 | 0.012 | |
| protein complex disassembly | GO:0043241 | 36 | 0.012 | |
| regulation of cell morphogenesis | GO:0022604 | 163 | 0.012 | |
| chemotaxis | GO:0006935 | 249 | 0.012 | |
| endomembrane system organization | GO:0010256 | 119 | 0.012 | |
| nucleobase containing small molecule metabolic process | GO:0055086 | 174 | 0.012 | |
| nucleoside phosphate metabolic process | GO:0006753 | 162 | 0.012 | |
| cation transmembrane transport | GO:0098655 | 88 | 0.011 | |
| positive regulation of nucleic acid templated transcription | GO:1903508 | 266 | 0.011 | |
| cation transport | GO:0006812 | 110 | 0.011 | |
| regulation of protein depolymerization | GO:1901879 | 27 | 0.011 | |
| cell cycle phase transition | GO:0044770 | 140 | 0.011 | |
| regulation of histone deacetylation | GO:0031063 | 2 | 0.011 | |
| nucleocytoplasmic transport | GO:0006913 | 72 | 0.011 | |
| striated muscle myosin thick filament assembly | GO:0071688 | 3 | 0.011 | |
| regulation of embryonic development | GO:0045995 | 68 | 0.011 | |
| regulation of mrna splicing via spliceosome | GO:0048024 | 64 | 0.011 | |
| cell death | GO:0008219 | 279 | 0.011 | Mouse |
| immune system process | GO:0002376 | 347 | 0.011 | |
| striated muscle cell differentiation | GO:0051146 | 90 | 0.011 | |
| purine containing compound metabolic process | GO:0072521 | 155 | 0.011 | |
| somatic stem cell division | GO:0048103 | 37 | 0.011 | |
| regulation of cellular response to stress | GO:0080135 | 89 | 0.011 | |
| gliogenesis | GO:0042063 | 80 | 0.011 | |
| nucleoside catabolic process | GO:0009164 | 112 | 0.011 | |
| multicellular organismal reproductive behavior | GO:0033057 | 110 | 0.011 | |
| regulation of protein phosphorylation | GO:0001932 | 64 | 0.011 | |
| snrna 3 end processing | GO:0034472 | 14 | 0.011 | |
| trna processing | GO:0008033 | 3 | 0.010 | |
| regulation of multi organism process | GO:0043900 | 131 | 0.010 | |
| negative regulation of epithelial cell proliferation | GO:0050680 | 4 | 0.010 | |
| positive regulation of transcription dna templated | GO:0045893 | 266 | 0.010 | |
| positive regulation of signal transduction | GO:0009967 | 223 | 0.010 | Mouse |
| positive regulation of developmental process | GO:0051094 | 143 | 0.010 | |
| purine nucleoside monophosphate metabolic process | GO:0009126 | 50 | 0.010 | |
