| chromosome organization | GO:0051276 | 360 | 0.094 | |
| establishment of localization in cell | GO:0051649 | 402 | 0.062 | |
| response to biotic stimulus | GO:0009607 | 294 | 0.060 | |
| regulation of cell cycle | GO:0051726 | 291 | 0.055 | |
| spindle organization | GO:0007051 | 253 | 0.054 | |
| regulation of organelle organization | GO:0033043 | 196 | 0.053 | |
| protein dna complex subunit organization | GO:0071824 | 86 | 0.051 | |
| negative regulation of gene expression | GO:0010629 | 387 | 0.050 | |
| microtubule organizing center organization | GO:0031023 | 168 | 0.050 | |
| rna processing | GO:0006396 | 147 | 0.046 | |
| cellular response to dna damage stimulus | GO:0006974 | 223 | 0.045 | |
| chromatin organization | GO:0006325 | 207 | 0.044 | |
| cellular protein modification process | GO:0006464 | 438 | 0.042 | |
| response to oxygen containing compound | GO:1901700 | 200 | 0.041 | |
| cellular macromolecular complex assembly | GO:0034622 | 153 | 0.039 | |
| cellular macromolecule localization | GO:0070727 | 220 | 0.037 | |
| posttranscriptional regulation of gene expression | GO:0010608 | 145 | 0.037 | |
| endocytosis | GO:0006897 | 310 | 0.037 | |
| transcription from rna polymerase ii promoter | GO:0006366 | 368 | 0.036 | |
| defense response to other organism | GO:0098542 | 225 | 0.036 | |
| dna metabolic process | GO:0006259 | 227 | 0.034 | |
| positive regulation of developmental process | GO:0051094 | 143 | 0.033 | |
| mitotic dna integrity checkpoint | GO:0044774 | 75 | 0.033 | |
| response to organic substance | GO:0010033 | 284 | 0.031 | |
| negative regulation of rna metabolic process | GO:0051253 | 251 | 0.031 | |
| tube morphogenesis | GO:0035239 | 191 | 0.030 | |
| regulation of multicellular organismal development | GO:2000026 | 414 | 0.030 | |
| protein dna complex assembly | GO:0065004 | 63 | 0.029 | |
| localization of cell | GO:0051674 | 257 | 0.029 | |
| meiotic nuclear division | GO:0007126 | 151 | 0.029 | |
| positive regulation of macromolecule metabolic process | GO:0010604 | 405 | 0.029 | |
| meiotic cell cycle | GO:0051321 | 171 | 0.028 | |
| single organism biosynthetic process | GO:0044711 | 206 | 0.028 | |
| body morphogenesis | GO:0010171 | 2 | 0.028 | |
| regionalization | GO:0003002 | 416 | 0.028 | |
| macromolecular complex assembly | GO:0065003 | 256 | 0.027 | |
| chromatin modification | GO:0016568 | 147 | 0.026 | |
| regulation of molecular function | GO:0065009 | 217 | 0.026 | |
| macromolecule methylation | GO:0043414 | 45 | 0.025 | |
| negative regulation of biosynthetic process | GO:0009890 | 277 | 0.024 | |
| growth | GO:0040007 | 359 | 0.024 | |
| response to external biotic stimulus | GO:0043207 | 293 | 0.024 | |
| single organism intracellular transport | GO:1902582 | 207 | 0.023 | |
| protein localization | GO:0008104 | 284 | 0.023 | |
| response to other organism | GO:0051707 | 293 | 0.023 | |
| response to bacterium | GO:0009617 | 198 | 0.023 | |
| negative regulation of cellular metabolic process | GO:0031324 | 382 | 0.023 | |
| positive regulation of gene expression | GO:0010628 | 290 | 0.023 | |
| protein complex assembly | GO:0006461 | 200 | 0.023 | |
| regulation of developmental growth | GO:0048638 | 174 | 0.023 | |
| connective tissue development | GO:0061448 | 3 | 0.022 | |
| regulation of cellular protein metabolic process | GO:0032268 | 243 | 0.022 | |
| histone modification | GO:0016570 | 106 | 0.022 | |
| regulation of intracellular signal transduction | GO:1902531 | 236 | 0.022 | |
| regulation of protein metabolic process | GO:0051246 | 256 | 0.022 | |
| peptidyl amino acid modification | GO:0018193 | 105 | 0.022 | |
| regulation of meiosis | GO:0040020 | 3 | 0.022 | |
| response to abiotic stimulus | GO:0009628 | 341 | 0.021 | |
| dna repair | GO:0006281 | 54 | 0.021 | |
| organic substance catabolic process | GO:1901575 | 308 | 0.020 | |
| embryo development ending in birth or egg hatching | GO:0009792 | 152 | 0.020 | |
| methylation | GO:0032259 | 47 | 0.020 | |
| vesicle mediated transport | GO:0016192 | 381 | 0.020 | |
| protein modification process | GO:0036211 | 438 | 0.020 | |
| intracellular transport | GO:0046907 | 228 | 0.020 | |
| positive regulation of response to stimulus | GO:0048584 | 323 | 0.019 | |
| developmental growth | GO:0048589 | 280 | 0.019 | |
| axis specification | GO:0009798 | 167 | 0.019 | |
| morphogenesis of an epithelium | GO:0002009 | 276 | 0.019 | |
| positive regulation of signaling | GO:0023056 | 243 | 0.019 | |
| axon guidance | GO:0007411 | 233 | 0.019 | |
| cellular macromolecule catabolic process | GO:0044265 | 136 | 0.018 | |
| immune system process | GO:0002376 | 347 | 0.018 | |
| ribonucleoprotein complex assembly | GO:0022618 | 23 | 0.018 | |
| cellular nitrogen compound catabolic process | GO:0044270 | 165 | 0.018 | |
| positive regulation of macromolecule biosynthetic process | GO:0010557 | 283 | 0.017 | |
| enzyme linked receptor protein signaling pathway | GO:0007167 | 179 | 0.017 | |
| cellular response to chemical stimulus | GO:0070887 | 199 | 0.017 | |
| negative regulation of macromolecule biosynthetic process | GO:0010558 | 270 | 0.017 | |
| negative regulation of nitrogen compound metabolic process | GO:0051172 | 265 | 0.017 | |
| carboxylic acid metabolic process | GO:0019752 | 92 | 0.017 | |
| cell proliferation | GO:0008283 | 299 | 0.016 | |
| macromolecule catabolic process | GO:0009057 | 161 | 0.016 | |
| digestive system development | GO:0055123 | 149 | 0.016 | |
| regulation of immune system process | GO:0002682 | 176 | 0.016 | |
| proteolysis | GO:0006508 | 192 | 0.016 | |
| organelle fission | GO:0048285 | 340 | 0.016 | |
| positive regulation of transcription dna templated | GO:0045893 | 266 | 0.016 | |
| embryonic morphogenesis | GO:0048598 | 206 | 0.015 | |
| positive regulation of signal transduction | GO:0009967 | 223 | 0.015 | |
| regulation of localization | GO:0032879 | 275 | 0.015 | |
| imaginal disc derived appendage development | GO:0048737 | 399 | 0.015 | |
| establishment or maintenance of cell polarity | GO:0007163 | 167 | 0.015 | |
| positive regulation of cellular component organization | GO:0051130 | 156 | 0.015 | |
| protein complex biogenesis | GO:0070271 | 201 | 0.015 | |
| negative regulation of cell communication | GO:0010648 | 223 | 0.015 | |
| organelle assembly | GO:0070925 | 198 | 0.014 | |
| ubiquitin dependent protein catabolic process | GO:0006511 | 78 | 0.014 | |
| mitotic spindle organization | GO:0007052 | 220 | 0.014 | |
| response to lipopolysaccharide | GO:0032496 | 4 | 0.014 | |
| regulation of dna metabolic process | GO:0051052 | 34 | 0.014 | |
| negative regulation of cellular macromolecule biosynthetic process | GO:2000113 | 267 | 0.014 | |
| organonitrogen compound metabolic process | GO:1901564 | 318 | 0.014 | |
| regulation of cell cycle process | GO:0010564 | 181 | 0.014 | |
| intracellular signal transduction | GO:0035556 | 300 | 0.014 | |
| positive regulation of multicellular organismal process | GO:0051240 | 143 | 0.013 | |
| regulation of mitotic cell cycle | GO:0007346 | 190 | 0.013 | |
| mitotic cell cycle phase transition | GO:0044772 | 138 | 0.013 | |
| positive regulation of biosynthetic process | GO:0009891 | 316 | 0.013 | |
| regulation of response to stress | GO:0080134 | 200 | 0.013 | |
| ncrna metabolic process | GO:0034660 | 43 | 0.013 | |
| positive regulation of protein metabolic process | GO:0051247 | 128 | 0.013 | |
| small molecule metabolic process | GO:0044281 | 305 | 0.013 | |
| translation | GO:0006412 | 69 | 0.013 | |
| nuclear division | GO:0000280 | 332 | 0.013 | |
| oocyte axis specification | GO:0007309 | 108 | 0.013 | |
| tube development | GO:0035295 | 244 | 0.013 | |
| centrosome organization | GO:0051297 | 163 | 0.013 | |
| nucleosome organization | GO:0034728 | 59 | 0.012 | |
| negative regulation of transcription dna templated | GO:0045892 | 237 | 0.012 | |
| negative regulation of cellular biosynthetic process | GO:0031327 | 277 | 0.012 | |
| regulation of cell differentiation | GO:0045595 | 302 | 0.012 | |
| cellular amino acid metabolic process | GO:0006520 | 61 | 0.012 | |
| nuclear pore organization | GO:0006999 | 1 | 0.012 | |
| regulation of growth | GO:0040008 | 233 | 0.012 | |
| regulation of phosphate metabolic process | GO:0019220 | 210 | 0.012 | |
| cell division | GO:0051301 | 248 | 0.012 | |
| organic cyclic compound catabolic process | GO:1901361 | 168 | 0.012 | |
| response to nitrogen compound | GO:1901698 | 90 | 0.012 | |
| somatic muscle development | GO:0007525 | 66 | 0.012 | |
| epithelial cell differentiation | GO:0030855 | 322 | 0.011 | |
| positive regulation of cell communication | GO:0010647 | 250 | 0.011 | |
| single organism cellular localization | GO:1902580 | 180 | 0.011 | |
| organic acid metabolic process | GO:0006082 | 103 | 0.011 | |
| histone methylation | GO:0016571 | 40 | 0.011 | |
| protein modification by small protein conjugation or removal | GO:0070647 | 106 | 0.011 | |
| regulation of cellular ketone metabolic process | GO:0010565 | 3 | 0.011 | |
| protein alkylation | GO:0008213 | 43 | 0.011 | |
| oxoacid metabolic process | GO:0043436 | 103 | 0.011 | |
| regulation of cell proliferation | GO:0042127 | 163 | 0.011 | |
| cellular catabolic process | GO:0044248 | 372 | 0.011 | |
| negative regulation of response to stimulus | GO:0048585 | 258 | 0.011 | |
| appendage development | GO:0048736 | 401 | 0.010 | |
| positive regulation of developmental growth | GO:0048639 | 62 | 0.010 | |
| regulation of transcription from rna polymerase ii promoter | GO:0006357 | 378 | 0.010 | |
| eye development | GO:0001654 | 323 | 0.010 | |
| posttranscriptional gene silencing | GO:0016441 | 46 | 0.010 | |
| phagocytosis | GO:0006909 | 215 | 0.010 | |
| negative regulation of signal transduction | GO:0009968 | 206 | 0.010 | |
| nucleobase containing compound catabolic process | GO:0034655 | 165 | 0.010 | |
| regulation of cellular component biogenesis | GO:0044087 | 201 | 0.010 | |
| cytoplasmic transport | GO:0016482 | 130 | 0.010 | |
