| chromosome organization | GO:0051276 | 360 | 0.179 | |
| regulation of transcription from rna polymerase ii promoter | GO:0006357 | 378 | 0.079 | |
| mitotic nuclear division | GO:0007067 | 213 | 0.054 | |
| protein modification process | GO:0036211 | 438 | 0.053 | |
| negative regulation of gene expression | GO:0010629 | 387 | 0.052 | |
| intracellular signal transduction | GO:0035556 | 300 | 0.051 | |
| transcription from rna polymerase ii promoter | GO:0006366 | 368 | 0.050 | |
| dna metabolic process | GO:0006259 | 227 | 0.044 | Yeast |
| cellular protein modification process | GO:0006464 | 438 | 0.043 | |
| chromatin modification | GO:0016568 | 147 | 0.039 | |
| organic substance catabolic process | GO:1901575 | 308 | 0.032 | Yeast |
| negative regulation of rna metabolic process | GO:0051253 | 251 | 0.031 | |
| appendage development | GO:0048736 | 401 | 0.031 | |
| negative regulation of nucleic acid templated transcription | GO:1903507 | 240 | 0.031 | |
| negative regulation of cellular macromolecule biosynthetic process | GO:2000113 | 267 | 0.031 | |
| regulation of cell cycle process | GO:0010564 | 181 | 0.029 | |
| histone modification | GO:0016570 | 106 | 0.029 | |
| spindle organization | GO:0007051 | 253 | 0.029 | |
| dendrite morphogenesis | GO:0048813 | 199 | 0.028 | |
| organelle fission | GO:0048285 | 340 | 0.028 | |
| appendage morphogenesis | GO:0035107 | 397 | 0.027 | |
| negative regulation of signal transduction | GO:0009968 | 206 | 0.027 | |
| nuclear division | GO:0000280 | 332 | 0.027 | |
| regulation of mitotic cell cycle | GO:0007346 | 190 | 0.026 | |
| regulation of multicellular organismal development | GO:2000026 | 414 | 0.026 | |
| modification dependent protein catabolic process | GO:0019941 | 78 | 0.026 | |
| chromatin organization | GO:0006325 | 207 | 0.025 | |
| growth | GO:0040007 | 359 | 0.024 | |
| cellular catabolic process | GO:0044248 | 372 | 0.024 | Yeast |
| response to extracellular stimulus | GO:0009991 | 116 | 0.024 | |
| positive regulation of response to stimulus | GO:0048584 | 323 | 0.023 | |
| regulation of cell cycle | GO:0051726 | 291 | 0.023 | |
| negative regulation of biosynthetic process | GO:0009890 | 277 | 0.023 | |
| phosphorylation | GO:0016310 | 294 | 0.023 | |
| programmed cell death | GO:0012501 | 257 | 0.023 | |
| negative regulation of transcription dna templated | GO:0045892 | 237 | 0.022 | |
| regulation of intracellular signal transduction | GO:1902531 | 236 | 0.022 | |
| dendrite development | GO:0016358 | 204 | 0.022 | |
| positive regulation of signal transduction | GO:0009967 | 223 | 0.021 | |
| catabolic process | GO:0009056 | 409 | 0.021 | Yeast |
| negative regulation of macromolecule biosynthetic process | GO:0010558 | 270 | 0.021 | |
| regulation of cell death | GO:0010941 | 173 | 0.021 | |
| peptidyl amino acid modification | GO:0018193 | 105 | 0.021 | |
| cell death | GO:0008219 | 279 | 0.021 | |
| negative regulation of cell cycle process | GO:0010948 | 109 | 0.021 | |
| positive regulation of biosynthetic process | GO:0009891 | 316 | 0.020 | Yeast |
| ras protein signal transduction | GO:0007265 | 88 | 0.020 | |
| ubiquitin dependent protein catabolic process | GO:0006511 | 78 | 0.020 | |
| compound eye development | GO:0048749 | 307 | 0.019 | |
| mitotic spindle organization | GO:0007052 | 220 | 0.019 | |
| positive regulation of signaling | GO:0023056 | 243 | 0.019 | |
| cellular response to dna damage stimulus | GO:0006974 | 223 | 0.019 | |
| negative regulation of rna biosynthetic process | GO:1902679 | 240 | 0.019 | |
| negative regulation of signaling | GO:0023057 | 219 | 0.019 | |
| organelle assembly | GO:0070925 | 198 | 0.018 | |
| proteolysis involved in cellular protein catabolic process | GO:0051603 | 83 | 0.018 | |
| positive regulation of nucleic acid templated transcription | GO:1903508 | 266 | 0.018 | |
| cell proliferation | GO:0008283 | 299 | 0.017 | |
| negative regulation of nitrogen compound metabolic process | GO:0051172 | 265 | 0.017 | |
| gene silencing | GO:0016458 | 138 | 0.017 | |
| mitotic cell cycle phase transition | GO:0044772 | 138 | 0.017 | |
| embryonic development via the syncytial blastoderm | GO:0001700 | 148 | 0.017 | |
| developmental growth | GO:0048589 | 280 | 0.017 | |
| cellular macromolecular complex assembly | GO:0034622 | 153 | 0.016 | |
| death | GO:0016265 | 284 | 0.016 | |
| proteasome mediated ubiquitin dependent protein catabolic process | GO:0043161 | 54 | 0.016 | |
| heterocycle catabolic process | GO:0046700 | 166 | 0.016 | Yeast |
| regulation of organelle organization | GO:0033043 | 196 | 0.016 | Yeast |
| immune system process | GO:0002376 | 347 | 0.016 | |
| regulation of microtubule depolymerization | GO:0031114 | 24 | 0.016 | |
| macromolecular complex assembly | GO:0065003 | 256 | 0.016 | |
| positive regulation of transcription from rna polymerase ii promoter | GO:0045944 | 204 | 0.016 | |
| neurological system process | GO:0050877 | 358 | 0.015 | |
| ribonucleoside catabolic process | GO:0042454 | 112 | 0.015 | |
| purine nucleoside triphosphate catabolic process | GO:0009146 | 108 | 0.015 | |
| response to abiotic stimulus | GO:0009628 | 341 | 0.015 | |
| regulation of cell differentiation | GO:0045595 | 302 | 0.015 | |
| nucleoside phosphate catabolic process | GO:1901292 | 110 | 0.015 | |
| positive regulation of rna biosynthetic process | GO:1902680 | 266 | 0.015 | |
| organonitrogen compound metabolic process | GO:1901564 | 318 | 0.014 | |
| small gtpase mediated signal transduction | GO:0007264 | 88 | 0.014 | |
| imaginal disc derived wing morphogenesis | GO:0007476 | 337 | 0.014 | |
| regulation of ras protein signal transduction | GO:0046578 | 93 | 0.014 | |
| positive regulation of transcription dna templated | GO:0045893 | 266 | 0.014 | |
| negative regulation of protein depolymerization | GO:1901880 | 23 | 0.014 | |
| eye development | GO:0001654 | 323 | 0.014 | |
| gland development | GO:0048732 | 191 | 0.014 | |
| imaginal disc derived appendage morphogenesis | GO:0035114 | 395 | 0.014 | |
| cell fate determination | GO:0001709 | 91 | 0.014 | |
| positive regulation of cell communication | GO:0010647 | 250 | 0.014 | |
| exocrine system development | GO:0035272 | 162 | 0.013 | |
| proteasomal protein catabolic process | GO:0010498 | 59 | 0.013 | |
| chromosome segregation | GO:0007059 | 157 | 0.013 | |
| negative regulation of response to stimulus | GO:0048585 | 258 | 0.013 | |
| sister chromatid segregation | GO:0000819 | 92 | 0.013 | |
| cellular nitrogen compound catabolic process | GO:0044270 | 165 | 0.013 | Yeast |
| spindle assembly | GO:0051225 | 80 | 0.013 | |
| cell cycle phase transition | GO:0044770 | 140 | 0.013 | |
| negative regulation of nucleobase containing compound metabolic process | GO:0045934 | 261 | 0.013 | |
| salivary gland morphogenesis | GO:0007435 | 145 | 0.013 | |
| cell division | GO:0051301 | 248 | 0.013 | |
| regulation of nervous system development | GO:0051960 | 248 | 0.013 | |
| female meiotic division | GO:0007143 | 70 | 0.013 | |
| vesicle mediated transport | GO:0016192 | 381 | 0.013 | |
| apoptotic process | GO:0006915 | 159 | 0.013 | |
| nucleoside triphosphate catabolic process | GO:0009143 | 108 | 0.013 | |
| aging | GO:0007568 | 143 | 0.013 | |
| regulation of programmed cell death | GO:0043067 | 152 | 0.012 | |
| purine nucleotide metabolic process | GO:0006163 | 146 | 0.012 | |
| negative regulation of cell communication | GO:0010648 | 223 | 0.012 | |
| nucleobase containing compound catabolic process | GO:0034655 | 165 | 0.012 | Yeast |
| imaginal disc derived appendage development | GO:0048737 | 399 | 0.012 | |
| covalent chromatin modification | GO:0016569 | 106 | 0.012 | |
| carbohydrate derivative metabolic process | GO:1901135 | 217 | 0.012 | |
| compound eye morphogenesis | GO:0001745 | 249 | 0.012 | |
| protein dna complex subunit organization | GO:0071824 | 86 | 0.012 | |
| post embryonic appendage morphogenesis | GO:0035120 | 385 | 0.012 | |
| purine containing compound metabolic process | GO:0072521 | 155 | 0.012 | |
| negative regulation of mitotic cell cycle phase transition | GO:1901991 | 103 | 0.012 | |
| wing disc morphogenesis | GO:0007472 | 344 | 0.012 | |
| taxis | GO:0042330 | 304 | 0.012 | |
| gland morphogenesis | GO:0022612 | 145 | 0.012 | |
| organophosphate metabolic process | GO:0019637 | 195 | 0.012 | |
| oocyte differentiation | GO:0009994 | 145 | 0.012 | |
| purine ribonucleoside catabolic process | GO:0046130 | 112 | 0.011 | |
| purine ribonucleotide metabolic process | GO:0009150 | 145 | 0.011 | |
| regulation of small gtpase mediated signal transduction | GO:0051056 | 93 | 0.011 | |
| embryo development ending in birth or egg hatching | GO:0009792 | 152 | 0.011 | |
| nucleoside metabolic process | GO:0009116 | 127 | 0.011 | |
| ribonucleoside triphosphate metabolic process | GO:0009199 | 119 | 0.011 | |
| positive regulation of developmental process | GO:0051094 | 143 | 0.011 | |
| carbohydrate derivative catabolic process | GO:1901136 | 118 | 0.011 | |
| regulation of molecular function | GO:0065009 | 217 | 0.011 | |
| regionalization | GO:0003002 | 416 | 0.011 | |
| negative regulation of cell death | GO:0060548 | 81 | 0.011 | |
| positive regulation of gene expression | GO:0010628 | 290 | 0.011 | |
| regulation of cellular amine metabolic process | GO:0033238 | 3 | 0.011 | |
| ribose phosphate metabolic process | GO:0019693 | 145 | 0.011 | |
| phagocytosis | GO:0006909 | 215 | 0.011 | |
| purine containing compound catabolic process | GO:0072523 | 112 | 0.011 | |
| nucleotide catabolic process | GO:0009166 | 109 | 0.011 | |
| ribonucleoside triphosphate catabolic process | GO:0009203 | 108 | 0.011 | |
| nucleoside catabolic process | GO:0009164 | 112 | 0.011 | |
| ribonucleoside metabolic process | GO:0009119 | 127 | 0.011 | |
| regulation of gene expression epigenetic | GO:0040029 | 128 | 0.011 | |
| regulation of cell development | GO:0060284 | 215 | 0.011 | |
| microtubule cytoskeleton organization involved in mitosis | GO:1902850 | 52 | 0.010 | |
| purine nucleoside catabolic process | GO:0006152 | 112 | 0.010 | |
| protein catabolic process | GO:0030163 | 101 | 0.010 | |
| sensory organ morphogenesis | GO:0090596 | 260 | 0.010 | |
| anatomical structure homeostasis | GO:0060249 | 97 | 0.010 | |
| stem cell division | GO:0017145 | 69 | 0.010 | |
| locomotory behavior | GO:0007626 | 176 | 0.010 | |
| respiratory system development | GO:0060541 | 213 | 0.010 | |
| establishment or maintenance of cell polarity | GO:0007163 | 167 | 0.010 | |
| negative regulation of cell cycle phase transition | GO:1901988 | 103 | 0.010 | |
| negative regulation of organelle organization | GO:0010639 | 56 | 0.010 | |
| organic cyclic compound catabolic process | GO:1901361 | 168 | 0.010 | Yeast |
| purine ribonucleoside metabolic process | GO:0046128 | 127 | 0.010 | |