| dna metabolic process | GO:0006259 | 227 | 0.305 | |
| protein modification process | GO:0036211 | 438 | 0.182 | |
| regulation of mitotic cell cycle phase transition | GO:1901990 | 130 | 0.137 | |
| cellular protein modification process | GO:0006464 | 438 | 0.117 | |
| negative regulation of gene expression | GO:0010629 | 387 | 0.114 | |
| regulation of cell cycle process | GO:0010564 | 181 | 0.107 | |
| macromolecular complex assembly | GO:0065003 | 256 | 0.107 | |
| cellular response to dna damage stimulus | GO:0006974 | 223 | 0.104 | |
| chromatin modification | GO:0016568 | 147 | 0.104 | |
| negative regulation of nucleobase containing compound metabolic process | GO:0045934 | 261 | 0.095 | |
| chromosome organization | GO:0051276 | 360 | 0.091 | |
| cellular response to chemical stimulus | GO:0070887 | 199 | 0.074 | |
| imaginal disc derived appendage development | GO:0048737 | 399 | 0.067 | |
| regulation of mitotic cell cycle | GO:0007346 | 190 | 0.066 | |
| posttranscriptional regulation of gene expression | GO:0010608 | 145 | 0.065 | |
| response to organic substance | GO:0010033 | 284 | 0.065 | |
| immune system process | GO:0002376 | 347 | 0.062 | |
| vesicle mediated transport | GO:0016192 | 381 | 0.061 | |
| chromatin organization | GO:0006325 | 207 | 0.061 | |
| phosphorylation | GO:0016310 | 294 | 0.054 | |
| mitotic dna damage checkpoint | GO:0044773 | 74 | 0.054 | |
| immune response | GO:0006955 | 246 | 0.051 | |
| immune system development | GO:0002520 | 57 | 0.048 | |
| cell cycle dna replication | GO:0044786 | 23 | 0.048 | |
| homeostatic process | GO:0042592 | 199 | 0.046 | |
| microtubule organizing center organization | GO:0031023 | 168 | 0.044 | |
| hemopoiesis | GO:0030097 | 46 | 0.043 | |
| tube morphogenesis | GO:0035239 | 191 | 0.043 | |
| transcription from rna polymerase ii promoter | GO:0006366 | 368 | 0.043 | |
| dna replication | GO:0006260 | 48 | 0.043 | |
| cell fate determination | GO:0001709 | 91 | 0.043 | |
| dna repair | GO:0006281 | 54 | 0.042 | |
| protein complex assembly | GO:0006461 | 200 | 0.041 | |
| cell proliferation | GO:0008283 | 299 | 0.038 | |
| hematopoietic or lymphoid organ development | GO:0048534 | 57 | 0.037 | |
| g2 dna damage checkpoint | GO:0031572 | 69 | 0.035 | |
| endocytosis | GO:0006897 | 310 | 0.034 | |
| negative regulation of macromolecule biosynthetic process | GO:0010558 | 270 | 0.034 | |
| intracellular signal transduction | GO:0035556 | 300 | 0.034 | |
| cellular catabolic process | GO:0044248 | 372 | 0.034 | |
| chromatin remodeling | GO:0006338 | 72 | 0.033 | |
| mitotic cell cycle phase transition | GO:0044772 | 138 | 0.032 | |
| gene silencing | GO:0016458 | 138 | 0.032 | |
| cardiovascular system development | GO:0072358 | 82 | 0.032 | |
| negative regulation of mitotic cell cycle phase transition | GO:1901991 | 103 | 0.032 | |
| appendage morphogenesis | GO:0035107 | 397 | 0.031 | |
| regulation of multicellular organismal development | GO:2000026 | 414 | 0.031 | |
| negative regulation of nucleic acid templated transcription | GO:1903507 | 240 | 0.030 | |
| nuclear dna replication | GO:0033260 | 1 | 0.030 | |
| phagocytosis | GO:0006909 | 215 | 0.030 | |
| mitotic g2 m transition checkpoint | GO:0044818 | 70 | 0.029 | |
| response to radiation | GO:0009314 | 155 | 0.029 | |
| post embryonic appendage morphogenesis | GO:0035120 | 385 | 0.028 | |
| covalent chromatin modification | GO:0016569 | 106 | 0.027 | |
| imaginal disc derived wing morphogenesis | GO:0007476 | 337 | 0.027 | |
| positive regulation of signaling | GO:0023056 | 243 | 0.027 | |
| eye pigmentation | GO:0048069 | 43 | 0.027 | |
| regulation of immune system process | GO:0002682 | 176 | 0.026 | |
| wound healing | GO:0042060 | 75 | 0.026 | |
| cellular macromolecular complex assembly | GO:0034622 | 153 | 0.025 | |
| gland development | GO:0048732 | 191 | 0.025 | |
| histone modification | GO:0016570 | 106 | 0.025 | |
| histone methylation | GO:0016571 | 40 | 0.025 | |
| cell death | GO:0008219 | 279 | 0.025 | |
| protein complex biogenesis | GO:0070271 | 201 | 0.025 | |
| macromolecule methylation | GO:0043414 | 45 | 0.024 | |
| positive regulation of cysteine type endopeptidase activity | GO:2001056 | 24 | 0.024 | |
| tube development | GO:0035295 | 244 | 0.024 | |
| negative regulation of cellular biosynthetic process | GO:0031327 | 277 | 0.024 | |
| developmental growth | GO:0048589 | 280 | 0.023 | |
| negative regulation of rna metabolic process | GO:0051253 | 251 | 0.023 | |
| imaginal disc derived appendage morphogenesis | GO:0035114 | 395 | 0.023 | |
| mitotic spindle organization | GO:0007052 | 220 | 0.023 | |
| response to light stimulus | GO:0009416 | 124 | 0.023 | |
| spindle organization | GO:0007051 | 253 | 0.023 | |
| positive regulation of macromolecule metabolic process | GO:0010604 | 405 | 0.022 | |
| regulation of gene expression epigenetic | GO:0040029 | 128 | 0.021 | |
| single organism biosynthetic process | GO:0044711 | 206 | 0.021 | |
| cell cycle checkpoint | GO:0000075 | 95 | 0.021 | |
| epithelial tube morphogenesis | GO:0060562 | 88 | 0.021 | |
| response to endogenous stimulus | GO:0009719 | 119 | 0.020 | |
| humoral immune response | GO:0006959 | 117 | 0.019 | |
| cell cell signaling involved in cell fate commitment | GO:0045168 | 210 | 0.019 | |
| establishment of localization in cell | GO:0051649 | 402 | 0.019 | |
| positive regulation of programmed cell death | GO:0043068 | 62 | 0.019 | |
| response to oxygen containing compound | GO:1901700 | 200 | 0.019 | |
| small gtpase mediated signal transduction | GO:0007264 | 88 | 0.018 | |
| cellular response to organic substance | GO:0071310 | 132 | 0.018 | |
| wing disc morphogenesis | GO:0007472 | 344 | 0.018 | |
| negative regulation of nitrogen compound metabolic process | GO:0051172 | 265 | 0.018 | |
| regulation of cell cycle phase transition | GO:1901987 | 130 | 0.017 | |
| dna geometric change | GO:0032392 | 16 | 0.017 | |
| positive regulation of response to stimulus | GO:0048584 | 323 | 0.017 | |
| dna damage checkpoint | GO:0000077 | 78 | 0.017 | |
| exocrine system development | GO:0035272 | 162 | 0.017 | |
| circulatory system development | GO:0072359 | 82 | 0.016 | |
| morphogenesis of an epithelium | GO:0002009 | 276 | 0.016 | |
| regulation of molecular function | GO:0065009 | 217 | 0.016 | |
| transmembrane receptor protein serine threonine kinase signaling pathway | GO:0007178 | 65 | 0.016 | |
| somatic muscle development | GO:0007525 | 66 | 0.016 | |
| regulation of protein metabolic process | GO:0051246 | 256 | 0.016 | |
| negative regulation of cellular macromolecule biosynthetic process | GO:2000113 | 267 | 0.016 | |
| negative regulation of transcription dna templated | GO:0045892 | 237 | 0.016 | |
| histone lysine methylation | GO:0034968 | 32 | 0.016 | |
| mapk cascade | GO:0000165 | 107 | 0.015 | |
| regulation of dna replication | GO:0006275 | 13 | 0.015 | |
| rna processing | GO:0006396 | 147 | 0.015 | |
| mitotic dna integrity checkpoint | GO:0044774 | 75 | 0.015 | |
| appendage development | GO:0048736 | 401 | 0.015 | |
| positive regulation of cellular biosynthetic process | GO:0031328 | 316 | 0.015 | |
| dna endoreduplication | GO:0042023 | 22 | 0.015 | |
| regulation of phosphatase activity | GO:0010921 | 3 | 0.015 | |
| cellular macromolecule catabolic process | GO:0044265 | 136 | 0.015 | |
| neural precursor cell proliferation | GO:0061351 | 75 | 0.015 | |
| macromolecule catabolic process | GO:0009057 | 161 | 0.015 | |
| single organism intracellular transport | GO:1902582 | 207 | 0.014 | |
| regulation of cellular protein metabolic process | GO:0032268 | 243 | 0.014 | |
| aging | GO:0007568 | 143 | 0.014 | |
| catabolic process | GO:0009056 | 409 | 0.014 | |
| smoothened signaling pathway | GO:0007224 | 49 | 0.014 | |
| protein catabolic process | GO:0030163 | 101 | 0.014 | |
| positive regulation of intracellular signal transduction | GO:1902533 | 116 | 0.014 | |
| muscle organ development | GO:0007517 | 127 | 0.014 | |
| protein dna complex subunit organization | GO:0071824 | 86 | 0.014 | |
| response to organonitrogen compound | GO:0010243 | 75 | 0.014 | |
| regulation of cell cycle | GO:0051726 | 291 | 0.013 | |
| programmed cell death | GO:0012501 | 257 | 0.013 | |
| regulation of response to stress | GO:0080134 | 200 | 0.013 | |
| mitotic g2 dna damage checkpoint | GO:0007095 | 69 | 0.013 | |
| regulation of mapk cascade | GO:0043408 | 92 | 0.013 | |
| carboxylic acid metabolic process | GO:0019752 | 92 | 0.013 | |
| activation of cysteine type endopeptidase activity involved in apoptotic process | GO:0006919 | 16 | 0.013 | |
| proteolysis | GO:0006508 | 192 | 0.013 | |
| central nervous system development | GO:0007417 | 201 | 0.012 | |
| positive regulation of transport | GO:0051050 | 92 | 0.012 | |
| multicellular organismal aging | GO:0010259 | 140 | 0.012 | |
| regulation of phosphorus metabolic process | GO:0051174 | 210 | 0.012 | |
| regulation of small gtpase mediated signal transduction | GO:0051056 | 93 | 0.012 | |
| peptidyl amino acid modification | GO:0018193 | 105 | 0.012 | |
| organic substance transport | GO:0071702 | 257 | 0.012 | |
| protein alkylation | GO:0008213 | 43 | 0.012 | |
| response to oxidative stress | GO:0006979 | 86 | 0.012 | |
| protein transport | GO:0015031 | 155 | 0.012 | |
| regulation of cell proliferation | GO:0042127 | 163 | 0.012 | |
| reproductive structure development | GO:0048608 | 74 | 0.011 | |
| cellular response to oxygen containing compound | GO:1901701 | 79 | 0.011 | |
| posttranscriptional gene silencing | GO:0016441 | 46 | 0.011 | |
| cellular protein catabolic process | GO:0044257 | 83 | 0.011 | |
| organelle fission | GO:0048285 | 340 | 0.011 | |
| digestive tract morphogenesis | GO:0048546 | 127 | 0.011 | |
| negative regulation of cell cycle process | GO:0010948 | 109 | 0.011 | |
| positive regulation of proteolysis | GO:0045862 | 52 | 0.011 | |
| regulation of anatomical structure morphogenesis | GO:0022603 | 242 | 0.011 | |
| nuclear pore organization | GO:0006999 | 1 | 0.010 | |
| negative regulation of cell cycle | GO:0045786 | 116 | 0.010 | |
| organic substance catabolic process | GO:1901575 | 308 | 0.010 | |
| cellular response to endogenous stimulus | GO:0071495 | 80 | 0.010 | |
| dna dependent dna replication | GO:0006261 | 17 | 0.010 | |
| regulation of apoptotic process | GO:0042981 | 130 | 0.010 | |
| stem cell differentiation | GO:0048863 | 117 | 0.010 | |
