| chromosome organization | GO:0051276 | 360 | 0.623 | |
| dna metabolic process | GO:0006259 | 227 | 0.581 | |
| chorion containing eggshell formation | GO:0007304 | 105 | 0.326 | |
| nuclear division | GO:0000280 | 332 | 0.289 | |
| negative regulation of cellular biosynthetic process | GO:0031327 | 277 | 0.289 | |
| positive regulation of nitrogen compound metabolic process | GO:0051173 | 354 | 0.264 | |
| organelle fission | GO:0048285 | 340 | 0.249 | |
| positive regulation of cellular biosynthetic process | GO:0031328 | 316 | 0.231 | |
| covalent chromatin modification | GO:0016569 | 106 | 0.225 | |
| chromatin organization | GO:0006325 | 207 | 0.221 | |
| eggshell chorion assembly | GO:0007306 | 66 | 0.198 | |
| columnar cuboidal epithelial cell development | GO:0002066 | 249 | 0.198 | |
| negative regulation of cellular macromolecule biosynthetic process | GO:2000113 | 267 | 0.180 | |
| regionalization | GO:0003002 | 416 | 0.179 | |
| dna replication | GO:0006260 | 48 | 0.179 | |
| epithelial cell differentiation | GO:0030855 | 322 | 0.178 | |
| axonogenesis | GO:0007409 | 290 | 0.177 | |
| chromosome condensation | GO:0030261 | 41 | 0.176 | |
| eggshell formation | GO:0030703 | 105 | 0.168 | |
| dna endoreduplication | GO:0042023 | 22 | 0.167 | |
| columnar cuboidal epithelial cell differentiation | GO:0002065 | 256 | 0.167 | |
| regulation of mitotic cell cycle | GO:0007346 | 190 | 0.163 | |
| negative regulation of transcription dna templated | GO:0045892 | 237 | 0.160 | |
| dendrite development | GO:0016358 | 204 | 0.155 | |
| chromatin modification | GO:0016568 | 147 | 0.151 | |
| negative regulation of nitrogen compound metabolic process | GO:0051172 | 265 | 0.143 | |
| regulation of cellular amino acid metabolic process | GO:0006521 | 0 | 0.142 | |
| imaginal disc derived appendage morphogenesis | GO:0035114 | 395 | 0.120 | |
| negative regulation of biosynthetic process | GO:0009890 | 277 | 0.118 | |
| compound eye photoreceptor cell differentiation | GO:0001751 | 140 | 0.115 | |
| negative regulation of cellular metabolic process | GO:0031324 | 382 | 0.115 | |
| dendrite morphogenesis | GO:0048813 | 199 | 0.108 | |
| cell cycle dna replication | GO:0044786 | 23 | 0.100 | |
| negative regulation of nucleobase containing compound metabolic process | GO:0045934 | 261 | 0.100 | |
| growth | GO:0040007 | 359 | 0.096 | |
| ovarian follicle cell development | GO:0030707 | 248 | 0.095 | |
| response to abiotic stimulus | GO:0009628 | 341 | 0.094 | |
| cellular component assembly involved in morphogenesis | GO:0010927 | 151 | 0.093 | |
| establishment or maintenance of cell polarity | GO:0007163 | 167 | 0.088 | |
| dorsal appendage formation | GO:0046843 | 47 | 0.088 | |
| dna conformation change | GO:0071103 | 105 | 0.084 | |
| mitotic sister chromatid segregation | GO:0000070 | 87 | 0.082 | |
| mitotic nuclear division | GO:0007067 | 213 | 0.081 | |
| positive regulation of biosynthetic process | GO:0009891 | 316 | 0.081 | |
| cell motility | GO:0048870 | 251 | 0.079 | |
| histone modification | GO:0016570 | 106 | 0.076 | |
| regulation of cell development | GO:0060284 | 215 | 0.076 | |
| negative regulation of nucleic acid templated transcription | GO:1903507 | 240 | 0.075 | |
| gene silencing | GO:0016458 | 138 | 0.074 | |
| spermatogenesis | GO:0007283 | 200 | 0.074 | |
| appendage development | GO:0048736 | 401 | 0.071 | |
| negative regulation of rna biosynthetic process | GO:1902679 | 240 | 0.071 | |
| positive regulation of macromolecule metabolic process | GO:0010604 | 405 | 0.070 | |
| epithelial cell development | GO:0002064 | 274 | 0.068 | |
| nucleobase containing compound catabolic process | GO:0034655 | 165 | 0.068 | |
| meiotic cell cycle | GO:0051321 | 171 | 0.067 | |
| positive regulation of nucleobase containing compound metabolic process | GO:0045935 | 332 | 0.064 | |
| muscle structure development | GO:0061061 | 224 | 0.063 | |
| positive regulation of macromolecule biosynthetic process | GO:0010557 | 283 | 0.063 | |
| chromosome segregation | GO:0007059 | 157 | 0.063 | |
| negative regulation of macromolecule biosynthetic process | GO:0010558 | 270 | 0.062 | |
| intracellular signal transduction | GO:0035556 | 300 | 0.061 | |
| dna packaging | GO:0006323 | 91 | 0.060 | |
| muscle organ development | GO:0007517 | 127 | 0.060 | |
| negative regulation of rna metabolic process | GO:0051253 | 251 | 0.059 | |
| sister chromatid segregation | GO:0000819 | 92 | 0.058 | |
| localization of cell | GO:0051674 | 257 | 0.057 | |
| dna repair | GO:0006281 | 54 | 0.057 | |
| spindle organization | GO:0007051 | 253 | 0.056 | |
| negative regulation of gene expression | GO:0010629 | 387 | 0.056 | |
| mitotic cell cycle phase transition | GO:0044772 | 138 | 0.053 | |
| male gamete generation | GO:0048232 | 201 | 0.051 | |
| peptidyl amino acid modification | GO:0018193 | 105 | 0.051 | |
| regulation of cell cycle process | GO:0010564 | 181 | 0.050 | |
| post embryonic appendage morphogenesis | GO:0035120 | 385 | 0.048 | |
| regulation of dna metabolic process | GO:0051052 | 34 | 0.047 | |
| positive regulation of gene expression | GO:0010628 | 290 | 0.046 | |
| appendage morphogenesis | GO:0035107 | 397 | 0.046 | |
| positive regulation of signaling | GO:0023056 | 243 | 0.045 | |
| embryonic pattern specification | GO:0009880 | 174 | 0.044 | |
| wing disc morphogenesis | GO:0007472 | 344 | 0.044 | |
| regulation of gene expression epigenetic | GO:0040029 | 128 | 0.043 | |
| mrna metabolic process | GO:0016071 | 124 | 0.043 | |
| imaginal disc derived appendage development | GO:0048737 | 399 | 0.043 | |
| negative regulation of signaling | GO:0023057 | 219 | 0.041 | |
| organic substance catabolic process | GO:1901575 | 308 | 0.041 | |
| segmentation | GO:0035282 | 207 | 0.039 | |
| regulation of g1 s transition of mitotic cell cycle | GO:2000045 | 23 | 0.039 | |
| regulation of organelle organization | GO:0033043 | 196 | 0.039 | |
| transcription from rna polymerase ii promoter | GO:0006366 | 368 | 0.038 | |
| heterochromatin organization | GO:0070828 | 25 | 0.037 | |
| enzyme linked receptor protein signaling pathway | GO:0007167 | 179 | 0.037 | |
| karyosome formation | GO:0030717 | 22 | 0.036 | |
| regulation of cellular ketone metabolic process | GO:0010565 | 3 | 0.035 | |
| mrna processing | GO:0006397 | 104 | 0.035 | |
| regulation of phosphorus metabolic process | GO:0051174 | 210 | 0.035 | |
| imaginal disc derived wing morphogenesis | GO:0007476 | 337 | 0.035 | |
| centrosome organization | GO:0051297 | 163 | 0.034 | |
| microtubule organizing center organization | GO:0031023 | 168 | 0.034 | |
| regulation of dna replication | GO:0006275 | 13 | 0.034 | |
| organelle assembly | GO:0070925 | 198 | 0.033 | |
| mitotic chromosome condensation | GO:0007076 | 22 | 0.032 | |
| dna methylation or demethylation | GO:0044728 | 4 | 0.031 | |
| regulation of cell differentiation | GO:0045595 | 302 | 0.031 | |
| posttranscriptional gene silencing by rna | GO:0035194 | 45 | 0.031 | |
| sex differentiation | GO:0007548 | 81 | 0.031 | |
| negative regulation of mitotic cell cycle phase transition | GO:1901991 | 103 | 0.030 | |
| gene silencing by rna | GO:0031047 | 57 | 0.029 | |
| cellular response to dna damage stimulus | GO:0006974 | 223 | 0.029 | |
| protein complex biogenesis | GO:0070271 | 201 | 0.028 | |
| axon development | GO:0061564 | 297 | 0.027 | |
| mitotic dna integrity checkpoint | GO:0044774 | 75 | 0.027 | |
| oocyte dorsal ventral axis specification | GO:0007310 | 34 | 0.027 | |
| body morphogenesis | GO:0010171 | 2 | 0.027 | |
| regulation of cell cycle g1 s phase transition | GO:1902806 | 23 | 0.027 | |
| positive regulation of transcription dna templated | GO:0045893 | 266 | 0.027 | |
| embryo development ending in birth or egg hatching | GO:0009792 | 152 | 0.027 | |
| single organismal cell cell adhesion | GO:0016337 | 45 | 0.026 | |
| ameboidal type cell migration | GO:0001667 | 151 | 0.026 | |
| cellular catabolic process | GO:0044248 | 372 | 0.025 | |
| nucleosome organization | GO:0034728 | 59 | 0.025 | |
| regulation of neurogenesis | GO:0050767 | 158 | 0.025 | |
| cell cycle phase transition | GO:0044770 | 140 | 0.025 | |
| protein complex assembly | GO:0006461 | 200 | 0.024 | |
| heterocycle catabolic process | GO:0046700 | 166 | 0.024 | |
| mitotic g2 m transition checkpoint | GO:0044818 | 70 | 0.024 | |
| single organism catabolic process | GO:0044712 | 228 | 0.023 | |
| sensory organ morphogenesis | GO:0090596 | 260 | 0.023 | |
| regulation of response to stress | GO:0080134 | 200 | 0.023 | |
| oocyte axis specification | GO:0007309 | 108 | 0.023 | |
| programmed cell death | GO:0012501 | 257 | 0.023 | |
| negative regulation of cell cycle process | GO:0010948 | 109 | 0.023 | |
| macromolecular complex assembly | GO:0065003 | 256 | 0.022 | |
| cell proliferation | GO:0008283 | 299 | 0.022 | |
| photoreceptor cell differentiation | GO:0046530 | 170 | 0.021 | |
| regulation of phosphate metabolic process | GO:0019220 | 210 | 0.021 | |
| eye photoreceptor cell differentiation | GO:0001754 | 145 | 0.021 | |
| small molecule metabolic process | GO:0044281 | 305 | 0.020 | |
| regulation of mitotic cell cycle phase transition | GO:1901990 | 130 | 0.020 | |
| regulation of neuron projection development | GO:0010975 | 69 | 0.020 | |
| positive regulation of developmental process | GO:0051094 | 143 | 0.020 | |
| dna dependent dna replication | GO:0006261 | 17 | 0.020 | |
| negative regulation of response to stimulus | GO:0048585 | 258 | 0.020 | |
| negative regulation of cell cycle | GO:0045786 | 116 | 0.020 | |
| regulation of localization | GO:0032879 | 275 | 0.020 | |
| regulation of nervous system development | GO:0051960 | 248 | 0.020 | |
| leg disc morphogenesis | GO:0007478 | 80 | 0.020 | |
| amine metabolic process | GO:0009308 | 12 | 0.020 | |
| single organism biosynthetic process | GO:0044711 | 206 | 0.020 | |
| gland development | GO:0048732 | 191 | 0.020 | |
| posttranscriptional gene silencing | GO:0016441 | 46 | 0.019 | |
| mitotic spindle organization | GO:0007052 | 220 | 0.019 | |
| exocrine system development | GO:0035272 | 162 | 0.019 | |
| regulation of phosphorylation | GO:0042325 | 147 | 0.019 | |
| oocyte development | GO:0048599 | 124 | 0.019 | |
| negative regulation of mitotic cell cycle | GO:0045930 | 109 | 0.019 | |
| regulation of multi organism process | GO:0043900 | 131 | 0.019 | |
| aromatic compound catabolic process | GO:0019439 | 166 | 0.019 | |
| organic cyclic compound catabolic process | GO:1901361 | 168 | 0.018 | |
| regulation of cellular amine metabolic process | GO:0033238 | 3 | 0.018 | |
| protein alkylation | GO:0008213 | 43 | 0.018 | |
| response to organophosphorus | GO:0046683 | 2 | 0.018 | |
| tissue migration | GO:0090130 | 155 | 0.018 | |
| regulation of anatomical structure morphogenesis | GO:0022603 | 242 | 0.018 | |
| dorsal ventral axis specification | GO:0009950 | 66 | 0.018 | |
| negative regulation of transcription from rna polymerase ii promoter | GO:0000122 | 119 | 0.018 | |
| regulation of cell cycle phase transition | GO:1901987 | 130 | 0.018 | |
| peptidyl lysine modification | GO:0018205 | 57 | 0.018 | |
| developmental maturation | GO:0021700 | 172 | 0.018 | |
| respiratory system development | GO:0060541 | 213 | 0.017 | |
| biological adhesion | GO:0022610 | 138 | 0.017 | |
| regulation of cell cycle | GO:0051726 | 291 | 0.017 | |
| oocyte construction | GO:0007308 | 112 | 0.017 | |
| regulation of intracellular signal transduction | GO:1902531 | 236 | 0.017 | |
| regulation of neuron differentiation | GO:0045664 | 103 | 0.017 | |
| protein dna complex subunit organization | GO:0071824 | 86 | 0.017 | |
| organonitrogen compound metabolic process | GO:1901564 | 318 | 0.017 | |
| cellular macromolecular complex assembly | GO:0034622 | 153 | 0.016 | |
| cell division | GO:0051301 | 248 | 0.016 | |
| developmental programmed cell death | GO:0010623 | 138 | 0.016 | |
| positive regulation of rna biosynthetic process | GO:1902680 | 266 | 0.016 | |
| phosphorylation | GO:0016310 | 294 | 0.016 | |
| regulation of cell proliferation | GO:0042127 | 163 | 0.016 | |
| gland morphogenesis | GO:0022612 | 145 | 0.016 | |
| positive regulation of phosphorus metabolic process | GO:0010562 | 139 | 0.016 | |
| positive regulation of nucleic acid templated transcription | GO:1903508 | 266 | 0.016 | |
| anterior posterior axis specification | GO:0009948 | 109 | 0.016 | |
| histone lysine methylation | GO:0034968 | 32 | 0.016 | |
| regulation of programmed cell death | GO:0043067 | 152 | 0.016 | |
| spindle assembly involved in mitosis | GO:0090307 | 50 | 0.016 | |
| nucleotide catabolic process | GO:0009166 | 109 | 0.015 | |
| neuron projection guidance | GO:0097485 | 241 | 0.015 | |
| maternal determination of anterior posterior axis embryo | GO:0008358 | 74 | 0.015 | |
| regulation of gene silencing | GO:0060968 | 63 | 0.015 | |
| transmembrane receptor protein tyrosine kinase signaling pathway | GO:0007169 | 116 | 0.015 | |
| negative regulation of signal transduction | GO:0009968 | 206 | 0.015 | |
| imaginal disc derived wing vein specification | GO:0007474 | 48 | 0.015 | |
| methylation | GO:0032259 | 47 | 0.015 | |
| regulation of notch signaling pathway | GO:0008593 | 100 | 0.015 | |
| apoptotic process | GO:0006915 | 159 | 0.015 | |
| chromatin remodeling | GO:0006338 | 72 | 0.015 | |
| tripartite regional subdivision | GO:0007351 | 103 | 0.014 | |
| chromosome separation | GO:0051304 | 42 | 0.014 | |
| axon guidance | GO:0007411 | 233 | 0.014 | |
| protein modification process | GO:0036211 | 438 | 0.014 | |
| signal transduction in response to dna damage | GO:0042770 | 3 | 0.014 | |
| protein localization | GO:0008104 | 284 | 0.014 | |
| histone methylation | GO:0016571 | 40 | 0.014 | |
| tube morphogenesis | GO:0035239 | 191 | 0.014 | |
| telencephalon development | GO:0021537 | 2 | 0.014 | |
| cell maturation | GO:0048469 | 144 | 0.014 | |
| protein methylation | GO:0006479 | 43 | 0.014 | |
| posttranscriptional regulation of gene expression | GO:0010608 | 145 | 0.014 | |
| stem cell differentiation | GO:0048863 | 117 | 0.014 | |
| rna processing | GO:0006396 | 147 | 0.014 | |
| phagocytosis | GO:0006909 | 215 | 0.014 | |
| cellular amine metabolic process | GO:0044106 | 12 | 0.014 | |
| internal protein amino acid acetylation | GO:0006475 | 38 | 0.014 | |
| macromolecule methylation | GO:0043414 | 45 | 0.014 | |
| circulatory system development | GO:0072359 | 82 | 0.014 | |
| regulation of cellular response to stress | GO:0080135 | 89 | 0.013 | |
| regulation of transcription from rna polymerase ii promoter | GO:0006357 | 378 | 0.013 | |
| sperm motility | GO:0030317 | 12 | 0.013 | |
| regulation of cell death | GO:0010941 | 173 | 0.013 | |
| reproductive structure development | GO:0048608 | 74 | 0.013 | |
| macromolecule catabolic process | GO:0009057 | 161 | 0.013 | |
| ras protein signal transduction | GO:0007265 | 88 | 0.013 | |
| internal peptidyl lysine acetylation | GO:0018393 | 38 | 0.013 | |
| cell fate determination | GO:0001709 | 91 | 0.013 | |
| eye photoreceptor cell development | GO:0042462 | 81 | 0.012 | |
| camera type eye development | GO:0043010 | 4 | 0.012 | |
| chromatin assembly or disassembly | GO:0006333 | 52 | 0.012 | |
| regulation of cell projection organization | GO:0031344 | 92 | 0.012 | |
| meiosis i | GO:0007127 | 59 | 0.012 | |
| purine nucleoside triphosphate catabolic process | GO:0009146 | 108 | 0.012 | |
| kidney development | GO:0001822 | 3 | 0.012 | |
| regulation of microtubule based process | GO:0032886 | 49 | 0.012 | |
| cellular protein modification process | GO:0006464 | 438 | 0.012 | |
| snrna 3 end processing | GO:0034472 | 14 | 0.012 | |
| mitotic g2 dna damage checkpoint | GO:0007095 | 69 | 0.012 | |
| nuclear dna replication | GO:0033260 | 1 | 0.012 | |
| purine nucleotide metabolic process | GO:0006163 | 146 | 0.012 | |
| positive regulation of signal transduction | GO:0009967 | 223 | 0.012 | |
| carbohydrate derivative catabolic process | GO:1901136 | 118 | 0.012 | |
| somatic muscle development | GO:0007525 | 66 | 0.012 | |
| leg disc development | GO:0035218 | 92 | 0.012 | |
| organonitrogen compound catabolic process | GO:1901565 | 128 | 0.012 | |
| eye development | GO:0001654 | 323 | 0.012 | |
| purine ribonucleoside catabolic process | GO:0046130 | 112 | 0.012 | |
| small gtpase mediated signal transduction | GO:0007264 | 88 | 0.012 | |
| meiotic nuclear division | GO:0007126 | 151 | 0.011 | |
| anterior posterior pattern specification | GO:0009952 | 136 | 0.011 | |
| meiotic cell cycle process | GO:1903046 | 132 | 0.011 | |
| dna recombination | GO:0006310 | 32 | 0.011 | |
| snrna processing | GO:0016180 | 14 | 0.011 | |
| purine ribonucleoside metabolic process | GO:0046128 | 127 | 0.011 | |
| rna polymerase ii transcriptional preinitiation complex assembly | GO:0051123 | 20 | 0.011 | |
| reproductive system development | GO:0061458 | 74 | 0.011 | |
| negative regulation of g1 s transition of mitotic cell cycle | GO:2000134 | 13 | 0.011 | |
| salivary gland morphogenesis | GO:0007435 | 145 | 0.011 | |
| regulation of reproductive process | GO:2000241 | 54 | 0.011 | |
| purine containing compound metabolic process | GO:0072521 | 155 | 0.011 | |
| dna biosynthetic process | GO:0071897 | 24 | 0.011 | |
| developmental growth | GO:0048589 | 280 | 0.011 | |
| negative regulation of cell communication | GO:0010648 | 223 | 0.011 | |
| positive regulation of phosphate metabolic process | GO:0045937 | 139 | 0.011 | |
| rna splicing via transesterification reactions with bulged adenosine as nucleophile | GO:0000377 | 73 | 0.010 | |
| signal transduction by phosphorylation | GO:0023014 | 107 | 0.010 | |
| positive regulation of phosphorylation | GO:0042327 | 87 | 0.010 | |
| death | GO:0016265 | 284 | 0.010 | |
| establishment of localization in cell | GO:0051649 | 402 | 0.010 | |
| positive regulation of protein metabolic process | GO:0051247 | 128 | 0.010 | |
