| rna splicing | GO:0008380 | 83 | 0.877 | |
| mrna metabolic process | GO:0016071 | 124 | 0.713 | |
| defense response | GO:0006952 | 300 | 0.669 | |
| mrna splicing via spliceosome | GO:0000398 | 73 | 0.531 | |
| rna splicing via transesterification reactions | GO:0000375 | 73 | 0.524 | |
| rna splicing via transesterification reactions with bulged adenosine as nucleophile | GO:0000377 | 73 | 0.492 | |
| regulation of mrna splicing via spliceosome | GO:0048024 | 64 | 0.466 | |
| immune system process | GO:0002376 | 347 | 0.452 | |
| negative regulation of nucleobase containing compound metabolic process | GO:0045934 | 261 | 0.440 | |
| negative regulation of gene expression | GO:0010629 | 387 | 0.342 | |
| rna processing | GO:0006396 | 147 | 0.338 | |
| embryo development ending in birth or egg hatching | GO:0009792 | 152 | 0.317 | |
| intracellular transport | GO:0046907 | 228 | 0.301 | |
| mrna processing | GO:0006397 | 104 | 0.295 | |
| defense response to other organism | GO:0098542 | 225 | 0.250 | |
| negative regulation of rna metabolic process | GO:0051253 | 251 | 0.243 | |
| regulation of transcription from rna polymerase ii promoter | GO:0006357 | 378 | 0.236 | |
| vesicle mediated transport | GO:0016192 | 381 | 0.235 | |
| regulation of mrna metabolic process | GO:1903311 | 72 | 0.211 | |
| regulation of defense response | GO:0031347 | 102 | 0.202 | |
| development of primary sexual characteristics | GO:0045137 | 50 | 0.196 | |
| organelle assembly | GO:0070925 | 198 | 0.195 | |
| mrna catabolic process | GO:0006402 | 33 | 0.173 | |
| response to bacterium | GO:0009617 | 198 | 0.155 | |
| cellularization | GO:0007349 | 90 | 0.140 | |
| developmental programmed cell death | GO:0010623 | 138 | 0.139 | |
| mitotic spindle organization | GO:0007052 | 220 | 0.136 | |
| response to other organism | GO:0051707 | 293 | 0.122 | |
| alternative mrna splicing via spliceosome | GO:0000380 | 60 | 0.118 | |
| response to biotic stimulus | GO:0009607 | 294 | 0.116 | |
| gene silencing | GO:0016458 | 138 | 0.115 | |
| regulation of alternative mrna splicing via spliceosome | GO:0000381 | 60 | 0.110 | |
| regulation of mrna processing | GO:0050684 | 71 | 0.100 | |
| dna conformation change | GO:0071103 | 105 | 0.096 | |
| negative regulation of nucleic acid templated transcription | GO:1903507 | 240 | 0.090 | |
| negative regulation of nitrogen compound metabolic process | GO:0051172 | 265 | 0.079 | |
| gonad development | GO:0008406 | 50 | 0.076 | |
| regulation of cell cycle | GO:0051726 | 291 | 0.063 | |
| regulation of rna splicing | GO:0043484 | 69 | 0.062 | |
| regulation of gene expression epigenetic | GO:0040029 | 128 | 0.061 | |
| defense response to bacterium | GO:0042742 | 178 | 0.059 | |
| response to radiation | GO:0009314 | 155 | 0.053 | |
| gene silencing by rna | GO:0031047 | 57 | 0.052 | |
| innate immune response | GO:0045087 | 144 | 0.052 | |
| macromolecule catabolic process | GO:0009057 | 161 | 0.051 | |
| ribonucleoprotein complex subunit organization | GO:0071826 | 28 | 0.050 | |
| intracellular signal transduction | GO:0035556 | 300 | 0.044 | |
| response to external biotic stimulus | GO:0043207 | 293 | 0.042 | |
| immune response | GO:0006955 | 246 | 0.042 | |
| response to reactive oxygen species | GO:0000302 | 24 | 0.042 | |
| taxis | GO:0042330 | 304 | 0.040 | |
| protein dna complex subunit organization | GO:0071824 | 86 | 0.040 | |
| enzyme linked receptor protein signaling pathway | GO:0007167 | 179 | 0.038 | |
| dna dependent dna replication | GO:0006261 | 17 | 0.038 | |
| defense response to gram negative bacterium | GO:0050829 | 94 | 0.036 | |
| cell cell signaling involved in cell fate commitment | GO:0045168 | 210 | 0.036 | |
| golgi vesicle transport | GO:0048193 | 27 | 0.036 | |
| spindle organization | GO:0007051 | 253 | 0.035 | |
| tripartite regional subdivision | GO:0007351 | 103 | 0.035 | |
| eye photoreceptor cell development | GO:0042462 | 81 | 0.034 | |
| eye development | GO:0001654 | 323 | 0.033 | |
| phosphorylation | GO:0016310 | 294 | 0.032 | |
| establishment or maintenance of cell polarity | GO:0007163 | 167 | 0.031 | |
| mitotic dna integrity checkpoint | GO:0044774 | 75 | 0.030 | |
| reproductive behavior | GO:0019098 | 122 | 0.030 | |
| gland development | GO:0048732 | 191 | 0.029 | |
| rna interference | GO:0016246 | 27 | 0.029 | |
| male gamete generation | GO:0048232 | 201 | 0.029 | |
| regulation of immune response | GO:0050776 | 118 | 0.029 | |
| positive regulation of macromolecule metabolic process | GO:0010604 | 405 | 0.029 | |
| programmed cell death | GO:0012501 | 257 | 0.028 | |
| eggshell chorion assembly | GO:0007306 | 66 | 0.028 | |
| catabolic process | GO:0009056 | 409 | 0.027 | |
| cell fate specification | GO:0001708 | 71 | 0.027 | |
| salivary gland histolysis | GO:0035070 | 88 | 0.026 | |
| regulation of protein metabolic process | GO:0051246 | 256 | 0.026 | |
| multi organism behavior | GO:0051705 | 175 | 0.025 | |
| ribonucleoprotein complex biogenesis | GO:0022613 | 31 | 0.025 | |
| negative regulation of biosynthetic process | GO:0009890 | 277 | 0.024 | |
| lateral inhibition | GO:0046331 | 206 | 0.024 | |
| compound eye development | GO:0048749 | 307 | 0.024 | |
| reproductive structure development | GO:0048608 | 74 | 0.023 | |
| negative regulation of cellular metabolic process | GO:0031324 | 382 | 0.022 | |
| regulation of multi organism process | GO:0043900 | 131 | 0.022 | |
| regulation of innate immune response | GO:0045088 | 71 | 0.022 | |
| camera type eye development | GO:0043010 | 4 | 0.022 | |
| negative regulation of rna biosynthetic process | GO:1902679 | 240 | 0.021 | |
| larval development | GO:0002164 | 104 | 0.021 | |
| establishment of localization in cell | GO:0051649 | 402 | 0.021 | |
| eye morphogenesis | GO:0048592 | 260 | 0.021 | |
| asymmetric protein localization | GO:0008105 | 33 | 0.021 | |
| positive regulation of biosynthetic process | GO:0009891 | 316 | 0.021 | |
| positive regulation of cellular biosynthetic process | GO:0031328 | 316 | 0.021 | |
| posttranscriptional gene silencing by rna | GO:0035194 | 45 | 0.020 | |
| cell death | GO:0008219 | 279 | 0.020 | |
| single organism intracellular transport | GO:1902582 | 207 | 0.020 | |
| rrna processing | GO:0006364 | 3 | 0.020 | |
| photoreceptor cell development | GO:0042461 | 96 | 0.020 | |
| protein localization | GO:0008104 | 284 | 0.020 | |
| regulation of cell differentiation | GO:0045595 | 302 | 0.019 | |
| chemosensory behavior | GO:0007635 | 106 | 0.019 | |
| regulation of molecular function | GO:0065009 | 217 | 0.019 | |
| endocytosis | GO:0006897 | 310 | 0.019 | |
| positive regulation of nitrogen compound metabolic process | GO:0051173 | 354 | 0.019 | |
| organophosphate metabolic process | GO:0019637 | 195 | 0.019 | |
| peptidyl lysine acetylation | GO:0018394 | 39 | 0.018 | |
| response to hydrogen peroxide | GO:0042542 | 11 | 0.018 | |
| response to inorganic substance | GO:0010035 | 44 | 0.018 | |
| imaginal disc derived appendage development | GO:0048737 | 399 | 0.018 | |
| segmentation | GO:0035282 | 207 | 0.018 | |
| regulation of localization | GO:0032879 | 275 | 0.018 | |
| mitotic cell cycle checkpoint | GO:0007093 | 88 | 0.017 | |
| organic substance catabolic process | GO:1901575 | 308 | 0.017 | |
| spermatogenesis | GO:0007283 | 200 | 0.017 | |
| cell aging | GO:0007569 | 2 | 0.017 | |
| reproductive system development | GO:0061458 | 74 | 0.017 | |
| posttranscriptional gene silencing | GO:0016441 | 46 | 0.016 | |
| regulation of immune system process | GO:0002682 | 176 | 0.016 | |
| peptidyl amino acid modification | GO:0018193 | 105 | 0.016 | |
| positive regulation of immune response | GO:0050778 | 63 | 0.016 | |
| positive regulation of growth | GO:0045927 | 75 | 0.016 | |
| gene silencing by mirna | GO:0035195 | 22 | 0.016 | |
| transcription from rna polymerase ii promoter | GO:0006366 | 368 | 0.015 | |
| regulation of cellular localization | GO:0060341 | 136 | 0.015 | |
| negative regulation of transcription from rna polymerase ii promoter | GO:0000122 | 119 | 0.015 | |
| aromatic compound catabolic process | GO:0019439 | 166 | 0.015 | |
| negative regulation of intrinsic apoptotic signaling pathway | GO:2001243 | 1 | 0.015 | |
| positive regulation of epidermal growth factor activated receptor activity | GO:0045741 | 1 | 0.015 | |
| negative regulation of macromolecule biosynthetic process | GO:0010558 | 270 | 0.014 | |
| gland morphogenesis | GO:0022612 | 145 | 0.014 | |
| negative regulation of cell differentiation | GO:0045596 | 143 | 0.014 | |
| regulation of hemocyte proliferation | GO:0035206 | 37 | 0.013 | |
| exocrine system development | GO:0035272 | 162 | 0.013 | |
| organic substance transport | GO:0071702 | 257 | 0.013 | |
| dna integrity checkpoint | GO:0031570 | 81 | 0.012 | |
| imaginal disc derived appendage morphogenesis | GO:0035114 | 395 | 0.012 | |
| receptor mediated endocytosis | GO:0006898 | 21 | 0.012 | |
| salivary gland morphogenesis | GO:0007435 | 145 | 0.012 | |
| regulation of cellular protein metabolic process | GO:0032268 | 243 | 0.012 | |
| mitotic nuclear division | GO:0007067 | 213 | 0.012 | |
| positive regulation of intracellular transport | GO:0032388 | 42 | 0.012 | |
| translational elongation | GO:0006414 | 4 | 0.012 | |
| ncrna metabolic process | GO:0034660 | 43 | 0.012 | |
| positive regulation of defense response | GO:0031349 | 59 | 0.011 | |
| cellular macromolecule localization | GO:0070727 | 220 | 0.011 | |
| stem cell maintenance | GO:0019827 | 67 | 0.011 | |
| regulation of phosphatase activity | GO:0010921 | 3 | 0.011 | |
| post embryonic appendage morphogenesis | GO:0035120 | 385 | 0.011 | |
| macromolecular complex assembly | GO:0065003 | 256 | 0.011 | |
| imaginal disc pattern formation | GO:0007447 | 91 | 0.011 | |
| nucleoside phosphate metabolic process | GO:0006753 | 162 | 0.011 | |
| genitalia development | GO:0048806 | 26 | 0.011 | |
| cell division | GO:0051301 | 248 | 0.010 | |
| response to organic cyclic compound | GO:0014070 | 89 | 0.010 | |
| death | GO:0016265 | 284 | 0.010 | |
| salivary gland development | GO:0007431 | 162 | 0.010 | |