| modification dependent protein catabolic process | GO:0019941 | 78 | 0.982 | Yeast |
| modification dependent macromolecule catabolic process | GO:0043632 | 79 | 0.969 | Yeast |
| proteolysis involved in cellular protein catabolic process | GO:0051603 | 83 | 0.953 | Yeast |
| ubiquitin dependent protein catabolic process | GO:0006511 | 78 | 0.939 | Yeast |
| cellular response to dna damage stimulus | GO:0006974 | 223 | 0.888 | |
| proteasomal protein catabolic process | GO:0010498 | 59 | 0.829 | Yeast |
| protein catabolic process | GO:0030163 | 101 | 0.806 | Yeast |
| proteolysis | GO:0006508 | 192 | 0.805 | Yeast |
| cellular protein catabolic process | GO:0044257 | 83 | 0.779 | Yeast |
| proteasome mediated ubiquitin dependent protein catabolic process | GO:0043161 | 54 | 0.777 | Yeast |
| cellular macromolecule catabolic process | GO:0044265 | 136 | 0.723 | Yeast |
| cellular catabolic process | GO:0044248 | 372 | 0.618 | Yeast |
| regulation of proteasomal ubiquitin dependent protein catabolic process | GO:0032434 | 37 | 0.588 | |
| macromolecule catabolic process | GO:0009057 | 161 | 0.518 | Yeast |
| catabolic process | GO:0009056 | 409 | 0.296 | Yeast |
| organic substance catabolic process | GO:1901575 | 308 | 0.237 | Yeast |
| mitotic cell cycle phase transition | GO:0044772 | 138 | 0.233 | |
| regulation of mitotic cell cycle phase transition | GO:1901990 | 130 | 0.215 | |
| organelle assembly | GO:0070925 | 198 | 0.183 | |
| regulation of mitotic cell cycle | GO:0007346 | 190 | 0.179 | |
| cell cycle phase transition | GO:0044770 | 140 | 0.167 | |
| macromolecular complex assembly | GO:0065003 | 256 | 0.156 | |
| mitotic spindle elongation | GO:0000022 | 81 | 0.148 | |
| multicellular organismal aging | GO:0010259 | 140 | 0.147 | Worm |
| body morphogenesis | GO:0010171 | 2 | 0.136 | |
| determination of adult lifespan | GO:0008340 | 137 | 0.128 | Worm |
| negative regulation of mitotic cell cycle | GO:0045930 | 109 | 0.116 | |
| larval development | GO:0002164 | 104 | 0.112 | Worm |
| g2 dna damage checkpoint | GO:0031572 | 69 | 0.109 | |
| mitotic dna damage checkpoint | GO:0044773 | 74 | 0.108 | |
| regulation of cell cycle process | GO:0010564 | 181 | 0.105 | |
| negative regulation of mitotic cell cycle phase transition | GO:1901991 | 103 | 0.097 | |
| embryo development ending in birth or egg hatching | GO:0009792 | 152 | 0.093 | Worm |
| dna templated transcription initiation | GO:0006352 | 25 | 0.093 | |
| dna repair | GO:0006281 | 54 | 0.092 | |
| lateral inhibition | GO:0046331 | 206 | 0.089 | |
| mitotic g2 m transition checkpoint | GO:0044818 | 70 | 0.088 | |
| negative regulation of cell cycle process | GO:0010948 | 109 | 0.087 | |
| negative regulation of cell cycle | GO:0045786 | 116 | 0.086 | |
| protein complex assembly | GO:0006461 | 200 | 0.086 | |
| regulation of proteolysis | GO:0030162 | 87 | 0.083 | |
| regulation of organelle organization | GO:0033043 | 196 | 0.079 | |
| nuclear division | GO:0000280 | 332 | 0.076 | |
| response to oxidative stress | GO:0006979 | 86 | 0.075 | |
| ribonucleoside catabolic process | GO:0042454 | 112 | 0.070 | |
| dna damage checkpoint | GO:0000077 | 78 | 0.066 | |
| mitotic spindle organization | GO:0007052 | 220 | 0.066 | |
| regionalization | GO:0003002 | 416 | 0.055 | |
| organelle fission | GO:0048285 | 340 | 0.051 | |
| cellular nitrogen compound catabolic process | GO:0044270 | 165 | 0.050 | |
| ribose phosphate metabolic process | GO:0019693 | 145 | 0.050 | |
| multi multicellular organism process | GO:0044706 | 123 | 0.049 | |
| regulation of cell cycle | GO:0051726 | 291 | 0.049 | |
| mitotic g2 dna damage checkpoint | GO:0007095 | 69 | 0.048 | |
| camera type eye development | GO:0043010 | 4 | 0.048 | |
| dna templated transcriptional preinitiation complex assembly | GO:0070897 | 20 | 0.047 | |
| carbohydrate derivative catabolic process | GO:1901136 | 118 | 0.046 | |
| eye photoreceptor cell differentiation | GO:0001754 | 145 | 0.043 | |
| negative regulation of developmental process | GO:0051093 | 201 | 0.043 | |
| negative regulation of cell cycle phase transition | GO:1901988 | 103 | 0.042 | |
| morphogenesis of an epithelium | GO:0002009 | 276 | 0.041 | |
| cellular protein modification process | GO:0006464 | 438 | 0.039 | |
| regulation of cellular protein metabolic process | GO:0032268 | 243 | 0.039 | |
| cell cycle checkpoint | GO:0000075 | 95 | 0.039 | |
| cellular macromolecular complex assembly | GO:0034622 | 153 | 0.038 | |
| regulation of endopeptidase activity | GO:0052548 | 36 | 0.037 | |
| multi organism reproductive behavior | GO:0044705 | 121 | 0.036 | |
| protein complex biogenesis | GO:0070271 | 201 | 0.036 | |
| protein dna complex subunit organization | GO:0071824 | 86 | 0.036 | |
| synaptic transmission | GO:0007268 | 288 | 0.036 | |
| protein deneddylation | GO:0000338 | 8 | 0.034 | |
| stem cell differentiation | GO:0048863 | 117 | 0.034 | |
| regulation of notch signaling pathway | GO:0008593 | 100 | 0.034 | |
| cellular response to oxygen containing compound | GO:1901701 | 79 | 0.033 | |
| protein modification by small protein conjugation or removal | GO:0070647 | 106 | 0.032 | |
| positive regulation of proteolysis | GO:0045862 | 52 | 0.030 | |
| regulation of molecular function | GO:0065009 | 217 | 0.029 | |
| mitotic nuclear division | GO:0007067 | 213 | 0.029 | |
| regulation of transcription from rna polymerase ii promoter | GO:0006357 | 378 | 0.028 | |
| dna integrity checkpoint | GO:0031570 | 81 | 0.028 | |
| purine nucleoside catabolic process | GO:0006152 | 112 | 0.028 | |
| nucleoside phosphate catabolic process | GO:1901292 | 110 | 0.028 | |
| positive regulation of response to stimulus | GO:0048584 | 323 | 0.027 | |
| heterocycle catabolic process | GO:0046700 | 166 | 0.027 | |
| negative regulation of transcription dna templated | GO:0045892 | 237 | 0.027 | |
| transcription from rna polymerase ii promoter | GO:0006366 | 368 | 0.026 | |
| regulation of proteolysis involved in cellular protein catabolic process | GO:1903050 | 44 | 0.026 | |
| multicellular organismal reproductive behavior | GO:0033057 | 110 | 0.026 | |
| negative regulation of purine nucleotide catabolic process | GO:0033122 | 1 | 0.026 | |
| regulation of cell cycle phase transition | GO:1901987 | 130 | 0.026 | |
| oviposition | GO:0018991 | 19 | 0.025 | |
| organonitrogen compound metabolic process | GO:1901564 | 318 | 0.025 | |
| ribonucleoside triphosphate catabolic process | GO:0009203 | 108 | 0.025 | |
| cellular component assembly involved in morphogenesis | GO:0010927 | 151 | 0.025 | |
| positive regulation of proteasomal ubiquitin dependent protein catabolic process | GO:0032436 | 19 | 0.024 | |
| mitotic dna integrity checkpoint | GO:0044774 | 75 | 0.024 | |
| cell cell signaling involved in cell fate commitment | GO:0045168 | 210 | 0.024 | |
| regulation of striated muscle contraction | GO:0006942 | 2 | 0.023 | |
| positive regulation of peptidase activity | GO:0010952 | 29 | 0.023 | |
| positive regulation of macromolecule metabolic process | GO:0010604 | 405 | 0.022 | |
| positive regulation of transcription dna templated | GO:0045893 | 266 | 0.022 | |
| regulation of chromosome organization | GO:0033044 | 64 | 0.022 | |
| small molecule metabolic process | GO:0044281 | 305 | 0.022 | |
| rna polymerase ii transcriptional preinitiation complex assembly | GO:0051123 | 20 | 0.020 | |
| regulation of vesicle mediated transport | GO:0060627 | 59 | 0.020 | |
| peptidyl amino acid modification | GO:0018193 | 105 | 0.019 | |
| positive regulation of cellular protein metabolic process | GO:0032270 | 118 | 0.019 | |
| positive regulation of nucleic acid templated transcription | GO:1903508 | 266 | 0.019 | |
| actin cytoskeleton organization | GO:0030036 | 206 | 0.019 | |
| positive regulation of cellular component organization | GO:0051130 | 156 | 0.019 | |
| mitotic cell cycle checkpoint | GO:0007093 | 88 | 0.019 | |
| negative regulation of phosphatase activity | GO:0010923 | 3 | 0.019 | |
| purine ribonucleoside triphosphate catabolic process | GO:0009207 | 108 | 0.019 | |
| notch receptor processing | GO:0007220 | 13 | 0.018 | |
| nucleoside catabolic process | GO:0009164 | 112 | 0.018 | |
| regulation of catalytic activity | GO:0050790 | 185 | 0.018 | |
| chemotaxis | GO:0006935 | 249 | 0.018 | |
| protein modification process | GO:0036211 | 438 | 0.018 | |
| nucleoside phosphate metabolic process | GO:0006753 | 162 | 0.018 | |
| molting cycle | GO:0042303 | 56 | 0.018 | |
| cell division | GO:0051301 | 248 | 0.018 | |
| reproductive behavior | GO:0019098 | 122 | 0.018 | |
| negative regulation of intrinsic apoptotic signaling pathway | GO:2001243 | 1 | 0.017 | |
| vesicle mediated transport | GO:0016192 | 381 | 0.017 | |
| endocytosis | GO:0006897 | 310 | 0.017 | |
| cell motility | GO:0048870 | 251 | 0.017 | |
| regulation of cellular protein catabolic process | GO:1903362 | 44 | 0.017 | |
| dna templated transcription elongation | GO:0006354 | 18 | 0.017 | |
| transcription initiation from rna polymerase ii promoter | GO:0006367 | 25 | 0.016 | |
| proteasome assembly | GO:0043248 | 2 | 0.016 | |
| columnar cuboidal epithelial cell development | GO:0002066 | 249 | 0.016 | |
| spindle organization | GO:0007051 | 253 | 0.016 | |
| intracellular transport | GO:0046907 | 228 | 0.016 | |
| dna metabolic process | GO:0006259 | 227 | 0.016 | |
| single organism catabolic process | GO:0044712 | 228 | 0.015 | |
| response to other organism | GO:0051707 | 293 | 0.015 | |
| regulation of phosphatase activity | GO:0010921 | 3 | 0.015 | |
| positive regulation of proteasomal protein catabolic process | GO:1901800 | 20 | 0.015 | |
| organonitrogen compound catabolic process | GO:1901565 | 128 | 0.015 | |
| negative regulation of response to stimulus | GO:0048585 | 258 | 0.014 | |
| chromosome segregation | GO:0007059 | 157 | 0.014 | |
| aromatic compound catabolic process | GO:0019439 | 166 | 0.014 | |
| purine ribonucleotide catabolic process | GO:0009154 | 109 | 0.014 | |
| epithelial cell differentiation | GO:0030855 | 322 | 0.014 | |
| protein modification by small protein conjugation | GO:0032446 | 79 | 0.014 | |
| purine ribonucleoside catabolic process | GO:0046130 | 112 | 0.014 | |
| phospholipid transport | GO:0015914 | 2 | 0.014 | |
| cellular response to nutrient | GO:0031670 | 1 | 0.013 | |
| cellular protein complex assembly | GO:0043623 | 71 | 0.013 | |
| positive regulation of catabolic process | GO:0009896 | 105 | 0.013 | |
| response to organic substance | GO:0010033 | 284 | 0.013 | |
| purine nucleoside triphosphate catabolic process | GO:0009146 | 108 | 0.013 | |
| spindle assembly | GO:0051225 | 80 | 0.013 | |
| purine ribonucleotide metabolic process | GO:0009150 | 145 | 0.013 | |
| negative regulation of cellular protein metabolic process | GO:0032269 | 85 | 0.013 | |
| response to external biotic stimulus | GO:0043207 | 293 | 0.012 | |
| regulation of gtpase activity | GO:0043087 | 44 | 0.012 | |
| chromatin organization | GO:0006325 | 207 | 0.012 | |
| positive regulation of cellular component biogenesis | GO:0044089 | 80 | 0.012 | |
| meiotic cell cycle | GO:0051321 | 171 | 0.012 | |
| negative regulation of transcription factor import into nucleus | GO:0042992 | 4 | 0.012 | |
| imaginal disc derived wing morphogenesis | GO:0007476 | 337 | 0.012 | |
| negative regulation of cellular macromolecule biosynthetic process | GO:2000113 | 267 | 0.012 | |
| digestive tract morphogenesis | GO:0048546 | 127 | 0.011 | |
| regulation of response to stress | GO:0080134 | 200 | 0.011 | |
| positive regulation of endopeptidase activity | GO:0010950 | 26 | 0.011 | |
| neuron projection guidance | GO:0097485 | 241 | 0.011 | |
| cellular response to chemical stimulus | GO:0070887 | 199 | 0.011 | |
| negative regulation of nucleic acid templated transcription | GO:1903507 | 240 | 0.011 | |
| regulation of atp catabolic process | GO:1903289 | 4 | 0.011 | |
| neurological system process | GO:0050877 | 358 | 0.011 | |
| cell migration | GO:0016477 | 238 | 0.011 | |
| spindle assembly involved in mitosis | GO:0090307 | 50 | 0.011 | |
| positive regulation of cellular biosynthetic process | GO:0031328 | 316 | 0.011 | |
| regulation of cellular catabolic process | GO:0031329 | 157 | 0.010 | |
| regulation of cellular response to stress | GO:0080135 | 89 | 0.010 | |
| organophosphate catabolic process | GO:0046434 | 112 | 0.010 | |
| amine metabolic process | GO:0009308 | 12 | 0.010 | |
| regulation of hemocyte proliferation | GO:0035206 | 37 | 0.010 | |
| nucleoside metabolic process | GO:0009116 | 127 | 0.010 | |
| peptidyl serine phosphorylation | GO:0018105 | 7 | 0.010 | |
| positive regulation of catalytic activity | GO:0043085 | 118 | 0.010 | |