| organelle assembly | GO:0070925 | 198 | 0.120 | |
| rna processing | GO:0006396 | 147 | 0.100 | |
| rrna processing | GO:0006364 | 3 | 0.074 | |
| negative regulation of gene expression | GO:0010629 | 387 | 0.073 | |
| regulation of cell cycle process | GO:0010564 | 181 | 0.067 | |
| negative regulation of biosynthetic process | GO:0009890 | 277 | 0.050 | |
| phosphorylation | GO:0016310 | 294 | 0.047 | |
| organic substance transport | GO:0071702 | 257 | 0.047 | |
| protein modification process | GO:0036211 | 438 | 0.043 | |
| negative regulation of cellular macromolecule biosynthetic process | GO:2000113 | 267 | 0.043 | |
| positive regulation of cellular biosynthetic process | GO:0031328 | 316 | 0.041 | |
| protein complex biogenesis | GO:0070271 | 201 | 0.039 | |
| organelle fission | GO:0048285 | 340 | 0.037 | |
| body morphogenesis | GO:0010171 | 2 | 0.037 | |
| macromolecular complex assembly | GO:0065003 | 256 | 0.036 | |
| cellular protein modification process | GO:0006464 | 438 | 0.034 | |
| regulation of protein metabolic process | GO:0051246 | 256 | 0.034 | |
| ncrna metabolic process | GO:0034660 | 43 | 0.034 | |
| organic substance catabolic process | GO:1901575 | 308 | 0.034 | |
| imaginal disc derived wing morphogenesis | GO:0007476 | 337 | 0.033 | |
| macromolecule catabolic process | GO:0009057 | 161 | 0.033 | |
| regulation of mitotic cell cycle | GO:0007346 | 190 | 0.033 | |
| regulation of cell cycle | GO:0051726 | 291 | 0.032 | |
| imaginal disc derived appendage morphogenesis | GO:0035114 | 395 | 0.032 | |
| nuclear division | GO:0000280 | 332 | 0.031 | |
| protein phosphorylation | GO:0006468 | 169 | 0.030 | |
| wing disc morphogenesis | GO:0007472 | 344 | 0.030 | |
| response to other organism | GO:0051707 | 293 | 0.030 | |
| protein complex assembly | GO:0006461 | 200 | 0.029 | |
| appendage development | GO:0048736 | 401 | 0.028 | |
| development of primary sexual characteristics | GO:0045137 | 50 | 0.027 | |
| nuclear transport | GO:0051169 | 72 | 0.027 | |
| intracellular transport | GO:0046907 | 228 | 0.027 | |
| immune response | GO:0006955 | 246 | 0.026 | |
| regulation of cellular component biogenesis | GO:0044087 | 201 | 0.026 | |
| cell death | GO:0008219 | 279 | 0.025 | |
| negative regulation of nitrogen compound metabolic process | GO:0051172 | 265 | 0.024 | |
| actin filament based process | GO:0030029 | 220 | 0.024 | |
| transcription from rna polymerase ii promoter | GO:0006366 | 368 | 0.024 | |
| regulation of multicellular organismal development | GO:2000026 | 414 | 0.023 | |
| imaginal disc derived appendage development | GO:0048737 | 399 | 0.023 | |
| compound eye development | GO:0048749 | 307 | 0.023 | |
| spindle organization | GO:0007051 | 253 | 0.023 | |
| regulation of cellular protein metabolic process | GO:0032268 | 243 | 0.023 | |
| establishment of localization in cell | GO:0051649 | 402 | 0.023 | |
| organonitrogen compound metabolic process | GO:1901564 | 318 | 0.023 | |
| sex differentiation | GO:0007548 | 81 | 0.023 | |
| negative regulation of cellular metabolic process | GO:0031324 | 382 | 0.022 | |
| mitotic cell cycle checkpoint | GO:0007093 | 88 | 0.022 | |
| positive regulation of macromolecule metabolic process | GO:0010604 | 405 | 0.022 | |
| positive regulation of nitrogen compound metabolic process | GO:0051173 | 354 | 0.022 | |
| negative regulation of nucleobase containing compound metabolic process | GO:0045934 | 261 | 0.022 | |
| appendage morphogenesis | GO:0035107 | 397 | 0.022 | |
| positive regulation of developmental process | GO:0051094 | 143 | 0.021 | |
| positive regulation of signaling | GO:0023056 | 243 | 0.021 | |
| mitotic dna damage checkpoint | GO:0044773 | 74 | 0.021 | |
| reproductive structure development | GO:0048608 | 74 | 0.021 | |
| response to biotic stimulus | GO:0009607 | 294 | 0.020 | |
| regulation of response to stress | GO:0080134 | 200 | 0.020 | |
| larval development | GO:0002164 | 104 | 0.020 | |
| post embryonic appendage morphogenesis | GO:0035120 | 385 | 0.020 | |
| mrna splicing via spliceosome | GO:0000398 | 73 | 0.020 | |
| regulation of meiosis | GO:0040020 | 3 | 0.019 | |
| columnar cuboidal epithelial cell differentiation | GO:0002065 | 256 | 0.019 | |
| positive regulation of response to stimulus | GO:0048584 | 323 | 0.019 | |
| cell motility | GO:0048870 | 251 | 0.019 | |
| cytoplasmic transport | GO:0016482 | 130 | 0.019 | |
| embryo development ending in birth or egg hatching | GO:0009792 | 152 | 0.019 | |
| nucleobase containing compound catabolic process | GO:0034655 | 165 | 0.018 | |
| single organism intracellular transport | GO:1902582 | 207 | 0.018 | |
| regulation of phosphorus metabolic process | GO:0051174 | 210 | 0.018 | |
| programmed cell death | GO:0012501 | 257 | 0.018 | |
| negative regulation of cell cycle process | GO:0010948 | 109 | 0.018 | |
| cellular catabolic process | GO:0044248 | 372 | 0.018 | |
| vesicle mediated transport | GO:0016192 | 381 | 0.018 | |
| nephron epithelium morphogenesis | GO:0072088 | 3 | 0.018 | |
| defense response to bacterium | GO:0042742 | 178 | 0.018 | |
| cellular macromolecular complex assembly | GO:0034622 | 153 | 0.017 | |
| mrna metabolic process | GO:0016071 | 124 | 0.016 | |
| regulation of mitotic cell cycle phase transition | GO:1901990 | 130 | 0.016 | |
| ribonucleoprotein complex assembly | GO:0022618 | 23 | 0.016 | |
| defense response | GO:0006952 | 300 | 0.016 | |
| reproductive system development | GO:0061458 | 74 | 0.016 | |
| imaginal disc derived leg morphogenesis | GO:0007480 | 80 | 0.016 | |
| regulation of cell cycle phase transition | GO:1901987 | 130 | 0.016 | |
| negative regulation of response to stimulus | GO:0048585 | 258 | 0.016 | |
| organic cyclic compound catabolic process | GO:1901361 | 168 | 0.016 | |
| peptidyl amino acid modification | GO:0018193 | 105 | 0.016 | |
| rna localization | GO:0006403 | 115 | 0.016 | |
| negative regulation of transcription dna templated | GO:0045892 | 237 | 0.015 | |
| cellular component assembly involved in morphogenesis | GO:0010927 | 151 | 0.015 | |
| negative regulation of cell communication | GO:0010648 | 223 | 0.015 | |
| negative regulation of macromolecule biosynthetic process | GO:0010558 | 270 | 0.015 | |
| nucleobase containing compound transport | GO:0015931 | 56 | 0.015 | |
| cell migration | GO:0016477 | 238 | 0.015 | |
| regulation of catalytic activity | GO:0050790 | 185 | 0.015 | |
| cellular macromolecule catabolic process | GO:0044265 | 136 | 0.015 | |
| negative regulation of rna biosynthetic process | GO:1902679 | 240 | 0.015 | |
| regulation of defense response | GO:0031347 | 102 | 0.014 | |
| dorsal ventral pattern formation | GO:0009953 | 133 | 0.014 | |
| ncrna processing | GO:0034470 | 30 | 0.014 | |
| catabolic process | GO:0009056 | 409 | 0.014 | |
| regulation of organelle organization | GO:0033043 | 196 | 0.014 | |
| cellular protein localization | GO:0034613 | 160 | 0.014 | |
| phagocytosis | GO:0006909 | 215 | 0.014 | |
| immune system process | GO:0002376 | 347 | 0.014 | |
| regulation of immune system process | GO:0002682 | 176 | 0.013 | |
| defense response to other organism | GO:0098542 | 225 | 0.013 | |
| leg disc morphogenesis | GO:0007478 | 80 | 0.013 | |
| wing disc pattern formation | GO:0035222 | 66 | 0.013 | |
| mitotic cell cycle phase transition | GO:0044772 | 138 | 0.013 | |
| negative regulation of cellular biosynthetic process | GO:0031327 | 277 | 0.013 | |
| gonad development | GO:0008406 | 50 | 0.013 | |
| positive regulation of cell communication | GO:0010647 | 250 | 0.013 | |
| regulation of cellular amine metabolic process | GO:0033238 | 3 | 0.013 | |
| cell cycle phase transition | GO:0044770 | 140 | 0.013 | |
| striated muscle cell differentiation | GO:0051146 | 90 | 0.013 | |
| amine metabolic process | GO:0009308 | 12 | 0.012 | |
| negative regulation of mitotic cell cycle phase transition | GO:1901991 | 103 | 0.012 | |
| innate immune response | GO:0045087 | 144 | 0.012 | |
| response to external biotic stimulus | GO:0043207 | 293 | 0.012 | |
| heterocycle catabolic process | GO:0046700 | 166 | 0.012 | |
| positive regulation of multicellular organismal process | GO:0051240 | 143 | 0.012 | |
| regionalization | GO:0003002 | 416 | 0.012 | |
| regulation of innate immune response | GO:0045088 | 71 | 0.012 | |
| ribonucleoprotein complex biogenesis | GO:0022613 | 31 | 0.012 | |
| exocrine system development | GO:0035272 | 162 | 0.012 | |
| positive regulation of signal transduction | GO:0009967 | 223 | 0.012 | |
| compound eye morphogenesis | GO:0001745 | 249 | 0.011 | |
| cellular macromolecule localization | GO:0070727 | 220 | 0.011 | |
| rna phosphodiester bond hydrolysis | GO:0090501 | 17 | 0.011 | |
| regulation of cellular amino acid metabolic process | GO:0006521 | 0 | 0.011 | |
| protein maturation | GO:0051604 | 71 | 0.011 | |
| cell cycle checkpoint | GO:0000075 | 95 | 0.011 | |
| nucleocytoplasmic transport | GO:0006913 | 72 | 0.011 | |
| mitotic g2 dna damage checkpoint | GO:0007095 | 69 | 0.011 | |
| wing disc dorsal ventral pattern formation | GO:0048190 | 47 | 0.011 | |
| regulation of mrna splicing via spliceosome | GO:0048024 | 64 | 0.011 | |
| regulation of gene expression epigenetic | GO:0040029 | 128 | 0.011 | |
| cell proliferation | GO:0008283 | 299 | 0.011 | |
| rna interference | GO:0016246 | 27 | 0.011 | |
| regulation of neurogenesis | GO:0050767 | 158 | 0.011 | |
| protein transport | GO:0015031 | 155 | 0.011 | |
| positive regulation of nucleic acid templated transcription | GO:1903508 | 266 | 0.010 | |
| localization of cell | GO:0051674 | 257 | 0.010 | |
| endocytosis | GO:0006897 | 310 | 0.010 | |
| positive regulation of biosynthetic process | GO:0009891 | 316 | 0.010 | |
| centrosome organization | GO:0051297 | 163 | 0.010 | |
| response to bacterium | GO:0009617 | 198 | 0.010 | |
| heart development | GO:0007507 | 82 | 0.010 | |