| chromatin organization | GO:0006325 | 207 | 0.742 | Yeast |
| negative regulation of cellular metabolic process | GO:0031324 | 382 | 0.618 | Yeast |
| negative regulation of rna biosynthetic process | GO:1902679 | 240 | 0.576 | Yeast |
| negative regulation of biosynthetic process | GO:0009890 | 277 | 0.569 | Yeast |
| negative regulation of gene expression epigenetic | GO:0045814 | 77 | 0.295 | Yeast |
| negative regulation of gene expression | GO:0010629 | 387 | 0.287 | Yeast |
| chromatin assembly or disassembly | GO:0006333 | 52 | 0.274 | Yeast |
| positive regulation of macromolecule biosynthetic process | GO:0010557 | 283 | 0.250 | |
| chromatin silencing | GO:0006342 | 76 | 0.234 | Yeast |
| negative regulation of cellular biosynthetic process | GO:0031327 | 277 | 0.226 | Yeast |
| negative regulation of nucleobase containing compound metabolic process | GO:0045934 | 261 | 0.199 | Yeast |
| negative regulation of cellular macromolecule biosynthetic process | GO:2000113 | 267 | 0.175 | Yeast |
| chromosome organization | GO:0051276 | 360 | 0.167 | Yeast |
| negative regulation of transcription dna templated | GO:0045892 | 237 | 0.166 | Yeast |
| negative regulation of macromolecule biosynthetic process | GO:0010558 | 270 | 0.160 | Yeast |
| negative regulation of nitrogen compound metabolic process | GO:0051172 | 265 | 0.153 | Yeast |
| regulation of gene expression epigenetic | GO:0040029 | 128 | 0.142 | Yeast |
| negative regulation of nucleic acid templated transcription | GO:1903507 | 240 | 0.128 | Yeast |
| heterochromatin organization | GO:0070828 | 25 | 0.108 | Yeast |
| positive regulation of gene expression | GO:0010628 | 290 | 0.105 | |
| cellular catabolic process | GO:0044248 | 372 | 0.104 | Yeast |
| dna metabolic process | GO:0006259 | 227 | 0.099 | Yeast |
| chromatin modification | GO:0016568 | 147 | 0.097 | Yeast |
| positive regulation of rna metabolic process | GO:0051254 | 271 | 0.090 | |
| negative regulation of rna metabolic process | GO:0051253 | 251 | 0.090 | Yeast |
| regulation of cell differentiation | GO:0045595 | 302 | 0.090 | |
| regulation of cell cycle process | GO:0010564 | 181 | 0.087 | |
| regulation of protein metabolic process | GO:0051246 | 256 | 0.076 | |
| cellular macromolecular complex assembly | GO:0034622 | 153 | 0.064 | |
| single organism catabolic process | GO:0044712 | 228 | 0.056 | Yeast |
| rna processing | GO:0006396 | 147 | 0.056 | |
| nucleoside phosphate metabolic process | GO:0006753 | 162 | 0.054 | Yeast |
| negative regulation of developmental process | GO:0051093 | 201 | 0.053 | |
| atp dependent chromatin remodeling | GO:0043044 | 22 | 0.051 | Yeast |
| dna conformation change | GO:0071103 | 105 | 0.051 | Yeast |
| regulation of cellular protein metabolic process | GO:0032268 | 243 | 0.051 | |
| programmed cell death | GO:0012501 | 257 | 0.050 | |
| positive regulation of macromolecule metabolic process | GO:0010604 | 405 | 0.050 | |
| gene silencing | GO:0016458 | 138 | 0.049 | Yeast |
| positive regulation of rna biosynthetic process | GO:1902680 | 266 | 0.045 | |
| immune system development | GO:0002520 | 57 | 0.045 | |
| positive regulation of biosynthetic process | GO:0009891 | 316 | 0.039 | |
| organonitrogen compound metabolic process | GO:1901564 | 318 | 0.038 | Yeast |
| organonitrogen compound catabolic process | GO:1901565 | 128 | 0.037 | Yeast |
| positive regulation of nucleic acid templated transcription | GO:1903508 | 266 | 0.036 | |
| cellular macromolecule localization | GO:0070727 | 220 | 0.036 | |
| single organism cellular localization | GO:1902580 | 180 | 0.034 | |
| positive regulation of endopeptidase activity | GO:0010950 | 26 | 0.033 | |
| hematopoietic or lymphoid organ development | GO:0048534 | 57 | 0.032 | |
| negative regulation of transcription from rna polymerase ii promoter | GO:0000122 | 119 | 0.031 | |
| regulation of cell proliferation | GO:0042127 | 163 | 0.031 | |
| regulation of cell cycle | GO:0051726 | 291 | 0.031 | |
| connective tissue development | GO:0061448 | 3 | 0.029 | |
| stem cell maintenance | GO:0019827 | 67 | 0.029 | |
| transcription from rna polymerase ii promoter | GO:0006366 | 368 | 0.028 | |
| regulation of translation | GO:0006417 | 56 | 0.028 | |
| regulation of peptidase activity | GO:0052547 | 39 | 0.028 | |
| catabolic process | GO:0009056 | 409 | 0.028 | Yeast |
| negative regulation of neurotransmitter secretion | GO:0046929 | 2 | 0.028 | |
| ovarian follicle cell cell adhesion | GO:0007299 | 4 | 0.028 | |
| positive regulation of cellular biosynthetic process | GO:0031328 | 316 | 0.028 | |
| positive regulation of nucleobase containing compound metabolic process | GO:0045935 | 332 | 0.026 | |
| organic substance catabolic process | GO:1901575 | 308 | 0.026 | Yeast |
| positive regulation of transcription dna templated | GO:0045893 | 266 | 0.026 | |
| response to dsrna | GO:0043331 | 15 | 0.025 | |
| stem cell differentiation | GO:0048863 | 117 | 0.025 | |
| regulation of organelle organization | GO:0033043 | 196 | 0.025 | |
| nucleotide metabolic process | GO:0009117 | 161 | 0.025 | Yeast |
| negative regulation of cell differentiation | GO:0045596 | 143 | 0.024 | |
| positive regulation of proteolysis | GO:0045862 | 52 | 0.024 | |
| oxoacid metabolic process | GO:0043436 | 103 | 0.023 | |
| cellular nitrogen compound catabolic process | GO:0044270 | 165 | 0.023 | Yeast |
| ribonucleotide metabolic process | GO:0009259 | 145 | 0.023 | Yeast |
| cell death | GO:0008219 | 279 | 0.023 | |
| glycosyl compound metabolic process | GO:1901657 | 127 | 0.023 | Yeast |
| nuclear division | GO:0000280 | 332 | 0.023 | |
| mrna metabolic process | GO:0016071 | 124 | 0.022 | |
| purine nucleotide metabolic process | GO:0006163 | 146 | 0.021 | Yeast |
| regulation of transcription from rna polymerase ii promoter | GO:0006357 | 378 | 0.021 | |
| regulation of meiosis | GO:0040020 | 3 | 0.021 | |
| response to nitrogen compound | GO:1901698 | 90 | 0.020 | |
| nucleoside monophosphate metabolic process | GO:0009123 | 52 | 0.020 | Yeast |
| purine ribonucleoside triphosphate metabolic process | GO:0009205 | 119 | 0.020 | Yeast |
| purine nucleoside metabolic process | GO:0042278 | 127 | 0.020 | Yeast |
| regulation of cellular catabolic process | GO:0031329 | 157 | 0.020 | |
| regulation of endopeptidase activity | GO:0052548 | 36 | 0.020 | |
| organic acid metabolic process | GO:0006082 | 103 | 0.020 | |
| regulation of cellular ketone metabolic process | GO:0010565 | 3 | 0.020 | |
| purine ribonucleoside monophosphate metabolic process | GO:0009167 | 50 | 0.020 | Yeast |
| production of small rna involved in gene silencing by rna | GO:0070918 | 15 | 0.019 | |
| positive regulation of hydrolase activity | GO:0051345 | 78 | 0.019 | |
| purine nucleoside monophosphate metabolic process | GO:0009126 | 50 | 0.019 | Yeast |
| positive regulation of catalytic activity | GO:0043085 | 118 | 0.019 | |
| ribonucleoside monophosphate metabolic process | GO:0009161 | 51 | 0.019 | Yeast |
| small molecule metabolic process | GO:0044281 | 305 | 0.019 | Yeast |
| protein localization | GO:0008104 | 284 | 0.019 | |
| nucleobase containing compound catabolic process | GO:0034655 | 165 | 0.019 | Yeast |
| purine ribonucleotide catabolic process | GO:0009154 | 109 | 0.019 | Yeast |
| regulation of multicellular organismal development | GO:2000026 | 414 | 0.018 | |
| establishment of protein localization | GO:0045184 | 163 | 0.018 | |
| cell proliferation | GO:0008283 | 299 | 0.018 | |
| mitotic dna damage checkpoint | GO:0044773 | 74 | 0.018 | |
| carbohydrate derivative metabolic process | GO:1901135 | 217 | 0.018 | Yeast |
| regulation of response to stress | GO:0080134 | 200 | 0.017 | |
| single organism biosynthetic process | GO:0044711 | 206 | 0.017 | |
| organelle assembly | GO:0070925 | 198 | 0.017 | |
| purine ribonucleoside triphosphate catabolic process | GO:0009207 | 108 | 0.017 | Yeast |
| ribonucleoside triphosphate metabolic process | GO:0009199 | 119 | 0.017 | Yeast |
| apoptotic process | GO:0006915 | 159 | 0.016 | |
| regulation of apoptotic process | GO:0042981 | 130 | 0.016 | |
| protein transport | GO:0015031 | 155 | 0.016 | |
| immune system process | GO:0002376 | 347 | 0.016 | |
| cellular response to dsrna | GO:0071359 | 15 | 0.016 | |
| intracellular protein transport | GO:0006886 | 104 | 0.016 | |
| cellular amino acid metabolic process | GO:0006520 | 61 | 0.016 | |
| cellular ketone metabolic process | GO:0042180 | 24 | 0.015 | |
| nucleobase containing small molecule metabolic process | GO:0055086 | 174 | 0.015 | Yeast |
| response to organic substance | GO:0010033 | 284 | 0.015 | |
| protein modification by small protein conjugation | GO:0032446 | 79 | 0.015 | |
| nucleocytoplasmic transport | GO:0006913 | 72 | 0.015 | |
| positive regulation of nitrogen compound metabolic process | GO:0051173 | 354 | 0.015 | |
| nucleoside triphosphate catabolic process | GO:0009143 | 108 | 0.015 | Yeast |
| regulation of hydrolase activity | GO:0051336 | 97 | 0.015 | |
| alpha amino 3 hydroxy 5 methyl 4 isoxazole propionate selective glutamate receptor clustering | GO:0097113 | 2 | 0.015 | |
| negative regulation of multicellular organismal process | GO:0051241 | 142 | 0.015 | |
| regulation of mrna processing | GO:0050684 | 71 | 0.014 | |
| protein targeting to nucleus | GO:0044744 | 51 | 0.014 | |
| regulation of molecular function | GO:0065009 | 217 | 0.014 | |
| regulation of localization | GO:0032879 | 275 | 0.014 | |
| ribonucleoside metabolic process | GO:0009119 | 127 | 0.014 | Yeast |
| regulation of g1 s transition of mitotic cell cycle | GO:2000045 | 23 | 0.014 | |
| formation of a compartment boundary | GO:0060288 | 4 | 0.014 | |
| carboxylic acid metabolic process | GO:0019752 | 92 | 0.013 | |
| histone methylation | GO:0016571 | 40 | 0.013 | |
| neurological system process | GO:0050877 | 358 | 0.013 | |
| cellular response to dna damage stimulus | GO:0006974 | 223 | 0.013 | Yeast |
| positive regulation of programmed cell death | GO:0043068 | 62 | 0.013 | |
| positive regulation of cellular catabolic process | GO:0031331 | 95 | 0.013 | |
| amine metabolic process | GO:0009308 | 12 | 0.013 | |
| nucleoside metabolic process | GO:0009116 | 127 | 0.013 | Yeast |
| positive regulation of cellular protein metabolic process | GO:0032270 | 118 | 0.013 | |
| axonogenesis | GO:0007409 | 290 | 0.012 | |
| protein localization to organelle | GO:0033365 | 82 | 0.012 | |
| single organism intracellular transport | GO:1902582 | 207 | 0.012 | |
| purine containing compound metabolic process | GO:0072521 | 155 | 0.012 | Yeast |
| heterocycle catabolic process | GO:0046700 | 166 | 0.012 | Yeast |
| nucleoside triphosphate metabolic process | GO:0009141 | 120 | 0.012 | Yeast |
| nucleosome organization | GO:0034728 | 59 | 0.012 | |
| ribonucleotide catabolic process | GO:0009261 | 109 | 0.012 | Yeast |
| ribose phosphate metabolic process | GO:0019693 | 145 | 0.012 | Yeast |
| mrna processing | GO:0006397 | 104 | 0.012 | |
| multi organism behavior | GO:0051705 | 175 | 0.012 | |
| cellular amine metabolic process | GO:0044106 | 12 | 0.012 | |
| proteolysis | GO:0006508 | 192 | 0.012 | |
| protein targeting | GO:0006605 | 64 | 0.012 | |
| posttranscriptional regulation of gene expression | GO:0010608 | 145 | 0.012 | |
| purine nucleoside catabolic process | GO:0006152 | 112 | 0.011 | Yeast |
| vesicle mediated transport | GO:0016192 | 381 | 0.011 | |
| protein ubiquitination | GO:0016567 | 70 | 0.011 | |
| atp metabolic process | GO:0046034 | 49 | 0.011 | Yeast |
| regulation of proteolysis | GO:0030162 | 87 | 0.011 | |
| phosphatidylinositol mediated signaling | GO:0048015 | 4 | 0.011 | |
| intracellular transport | GO:0046907 | 228 | 0.011 | |
| exocrine system development | GO:0035272 | 162 | 0.011 | |
| endocytosis | GO:0006897 | 310 | 0.011 | |
| regulation of alternative mrna splicing via spliceosome | GO:0000381 | 60 | 0.011 | |
| protein alkylation | GO:0008213 | 43 | 0.011 | |
| rna localization | GO:0006403 | 115 | 0.011 | |
| tube morphogenesis | GO:0035239 | 191 | 0.011 | |
| macromolecular complex assembly | GO:0065003 | 256 | 0.010 | Yeast |
| ribonucleoprotein complex subunit organization | GO:0071826 | 28 | 0.010 | |
| cellular protein modification process | GO:0006464 | 438 | 0.010 | |
| response to oxygen containing compound | GO:1901700 | 200 | 0.010 | |
| positive regulation of apoptotic process | GO:0043065 | 47 | 0.010 | |
| negative regulation of cell cycle | GO:0045786 | 116 | 0.010 | |
| nucleoside catabolic process | GO:0009164 | 112 | 0.010 | Yeast |
| positive regulation of intracellular transport | GO:0032388 | 42 | 0.010 | |
| regulation of growth | GO:0040008 | 233 | 0.010 | |