| tissue morphogenesis | GO:0048729 | 297 | 0.821 | |
| epithelial cell differentiation | GO:0030855 | 322 | 0.739 | |
| regionalization | GO:0003002 | 416 | 0.703 | |
| negative regulation of cell communication | GO:0010648 | 223 | 0.663 | |
| neuroblast development | GO:0014019 | 13 | 0.647 | |
| positive regulation of transcription from rna polymerase ii promoter | GO:0045944 | 204 | 0.590 | |
| gastrulation | GO:0007369 | 70 | 0.564 | |
| negative regulation of cellular biosynthetic process | GO:0031327 | 277 | 0.564 | |
| regulation of transcription from rna polymerase ii promoter | GO:0006357 | 378 | 0.552 | |
| positive regulation of macromolecule metabolic process | GO:0010604 | 405 | 0.531 | |
| negative regulation of nucleobase containing compound metabolic process | GO:0045934 | 261 | 0.510 | |
| positive regulation of gene expression | GO:0010628 | 290 | 0.503 | |
| negative regulation of transcription dna templated | GO:0045892 | 237 | 0.482 | |
| negative regulation of rna biosynthetic process | GO:1902679 | 240 | 0.469 | |
| positive regulation of nucleic acid templated transcription | GO:1903508 | 266 | 0.465 | |
| regulation of apoptotic process | GO:0042981 | 130 | 0.389 | Fly |
| embryonic development via the syncytial blastoderm | GO:0001700 | 148 | 0.385 | |
| cell death | GO:0008219 | 279 | 0.381 | Fly |
| regulation of cell differentiation | GO:0045595 | 302 | 0.374 | |
| phosphorylation | GO:0016310 | 294 | 0.368 | |
| leg disc development | GO:0035218 | 92 | 0.357 | |
| segmentation | GO:0035282 | 207 | 0.345 | |
| positive regulation of rna metabolic process | GO:0051254 | 271 | 0.331 | |
| digestive system development | GO:0055123 | 149 | 0.301 | |
| death | GO:0016265 | 284 | 0.295 | Fly |
| epidermal cell differentiation | GO:0009913 | 51 | 0.288 | |
| positive regulation of biosynthetic process | GO:0009891 | 316 | 0.286 | |
| dendrite morphogenesis | GO:0048813 | 199 | 0.284 | |
| imaginal disc derived appendage morphogenesis | GO:0035114 | 395 | 0.271 | |
| regulation of multicellular organismal development | GO:2000026 | 414 | 0.244 | |
| leg disc morphogenesis | GO:0007478 | 80 | 0.238 | |
| negative regulation of signaling | GO:0023057 | 219 | 0.238 | |
| forebrain development | GO:0030900 | 2 | 0.230 | |
| appendage morphogenesis | GO:0035107 | 397 | 0.227 | |
| positive regulation of macromolecule biosynthetic process | GO:0010557 | 283 | 0.222 | |
| imaginal disc derived leg morphogenesis | GO:0007480 | 80 | 0.209 | |
| mapk cascade | GO:0000165 | 107 | 0.200 | |
| intracellular signal transduction | GO:0035556 | 300 | 0.195 | |
| hair cell differentiation | GO:0035315 | 47 | 0.191 | |
| positive regulation of rna biosynthetic process | GO:1902680 | 266 | 0.177 | |
| chorion containing eggshell formation | GO:0007304 | 105 | 0.173 | |
| axis specification | GO:0009798 | 167 | 0.166 | |
| epidermis development | GO:0008544 | 65 | 0.161 | |
| negative regulation of g1 s transition of mitotic cell cycle | GO:2000134 | 13 | 0.160 | |
| regulation of cell death | GO:0010941 | 173 | 0.152 | Fly |
| eye antennal disc development | GO:0035214 | 60 | 0.137 | |
| establishment of imaginal disc derived wing hair orientation | GO:0001737 | 24 | 0.136 | |
| regulation of organ morphogenesis | GO:2000027 | 78 | 0.130 | |
| imaginal disc derived wing hair organization | GO:0035317 | 45 | 0.126 | |
| neuroblast differentiation | GO:0014016 | 29 | 0.123 | |
| negative regulation of rna metabolic process | GO:0051253 | 251 | 0.120 | |
| central nervous system development | GO:0007417 | 201 | 0.114 | |
| non sensory hair organization | GO:0035316 | 47 | 0.109 | |
| sensory organ morphogenesis | GO:0090596 | 260 | 0.105 | |
| anterior posterior axis specification | GO:0009948 | 109 | 0.104 | |
| regulation of localization | GO:0032879 | 275 | 0.103 | |
| response to alcohol | GO:0097305 | 95 | 0.100 | |
| regulation of cell development | GO:0060284 | 215 | 0.098 | |
| negative regulation of gene expression | GO:0010629 | 387 | 0.098 | |
| developmental growth | GO:0048589 | 280 | 0.095 | |
| actin filament based process | GO:0030029 | 220 | 0.094 | |
| negative regulation of response to stimulus | GO:0048585 | 258 | 0.094 | |
| protein modification process | GO:0036211 | 438 | 0.093 | |
| regulation of neurogenesis | GO:0050767 | 158 | 0.090 | |
| axonogenesis | GO:0007409 | 290 | 0.088 | |
| cell proliferation | GO:0008283 | 299 | 0.088 | Fly |
| positive regulation of transcription dna templated | GO:0045893 | 266 | 0.086 | |
| skin development | GO:0043588 | 65 | 0.084 | |
| positive regulation of cellular protein metabolic process | GO:0032270 | 118 | 0.079 | |
| axon guidance | GO:0007411 | 233 | 0.075 | |
| dendrite guidance | GO:0070983 | 21 | 0.074 | |
| regulation of mitotic spindle checkpoint | GO:1903504 | 1 | 0.073 | |
| regulation of dendrite morphogenesis | GO:0048814 | 28 | 0.070 | |
| stem cell fate determination | GO:0048867 | 15 | 0.069 | |
| positive regulation of cellular biosynthetic process | GO:0031328 | 316 | 0.067 | |
| cell migration | GO:0016477 | 238 | 0.067 | |
| dendrite development | GO:0016358 | 204 | 0.066 | |
| establishment or maintenance of apical basal cell polarity | GO:0035088 | 34 | 0.063 | |
| cellular catabolic process | GO:0044248 | 372 | 0.062 | |
| kidney development | GO:0001822 | 3 | 0.059 | |
| establishment or maintenance of cell polarity | GO:0007163 | 167 | 0.058 | |
| cell cell signaling involved in cell fate commitment | GO:0045168 | 210 | 0.057 | |
| regulation of cellular catabolic process | GO:0031329 | 157 | 0.056 | |
| establishment or maintenance of bipolar cell polarity | GO:0061245 | 34 | 0.056 | |
| negative regulation of nitrogen compound metabolic process | GO:0051172 | 265 | 0.056 | |
| response to light stimulus | GO:0009416 | 124 | 0.055 | |
| positive regulation of retinal cell programmed cell death | GO:0046670 | 9 | 0.055 | |
| limb morphogenesis | GO:0035108 | 1 | 0.055 | |
| retina morphogenesis in camera type eye | GO:0060042 | 2 | 0.055 | |
| negative regulation of signal transduction | GO:0009968 | 206 | 0.054 | |
| wing disc morphogenesis | GO:0007472 | 344 | 0.054 | |
| eye development | GO:0001654 | 323 | 0.054 | |
| programmed cell death | GO:0012501 | 257 | 0.053 | Fly |
| negative regulation of heart induction by canonical wnt signaling pathway | GO:0003136 | 3 | 0.053 | |
| reproductive structure development | GO:0048608 | 74 | 0.051 | |
| multicellular organismal reproductive behavior | GO:0033057 | 110 | 0.050 | |
| compound eye morphogenesis | GO:0001745 | 249 | 0.050 | |
| hindbrain development | GO:0030902 | 2 | 0.050 | |
| blastoderm segmentation | GO:0007350 | 159 | 0.050 | |
| regulation of imaginal disc derived wing size | GO:0044719 | 20 | 0.049 | |
| defense response | GO:0006952 | 300 | 0.049 | |
| enteroendocrine cell differentiation | GO:0035883 | 1 | 0.048 | |
| negative regulation of cell differentiation | GO:0045596 | 143 | 0.048 | |
| positive regulation of nitrogen compound metabolic process | GO:0051173 | 354 | 0.048 | |
| organic substance catabolic process | GO:1901575 | 308 | 0.046 | |
| renal system development | GO:0072001 | 72 | 0.046 | |
| negative regulation of heart induction | GO:1901320 | 3 | 0.045 | |
| cellular response to endogenous stimulus | GO:0071495 | 80 | 0.045 | |
| establishment of tissue polarity | GO:0007164 | 87 | 0.045 | |
| regulation of establishment of protein localization | GO:0070201 | 61 | 0.045 | |
| establishment of cell polarity | GO:0030010 | 40 | 0.045 | |
| developmental maturation | GO:0021700 | 172 | 0.045 | Fly |
| cellular response to chemical stimulus | GO:0070887 | 199 | 0.045 | |
| response to abiotic stimulus | GO:0009628 | 341 | 0.044 | |
| neuron maturation | GO:0042551 | 31 | 0.044 | Fly |
| negative regulation of cellular macromolecule biosynthetic process | GO:2000113 | 267 | 0.044 | |
| taxis | GO:0042330 | 304 | 0.043 | |
| protein phosphorylation | GO:0006468 | 169 | 0.042 | |
| establishment of ommatidial planar polarity | GO:0042067 | 49 | 0.041 | |
| regulation of dendrite development | GO:0050773 | 37 | 0.040 | |
| imaginal disc derived wing morphogenesis | GO:0007476 | 337 | 0.039 | |
| posttranscriptional regulation of gene expression | GO:0010608 | 145 | 0.038 | |
| regulation of phosphoprotein phosphatase activity | GO:0043666 | 3 | 0.037 | |
| jnk cascade | GO:0007254 | 50 | 0.037 | |
| protein localization | GO:0008104 | 284 | 0.037 | |
| regulation of nervous system development | GO:0051960 | 248 | 0.037 | |
| regulation of programmed cell death | GO:0043067 | 152 | 0.037 | Fly |
| convergent extension | GO:0060026 | 2 | 0.037 | |
| negative regulation of neurogenesis | GO:0050768 | 53 | 0.037 | |
| establishment or maintenance of epithelial cell apical basal polarity | GO:0045197 | 24 | 0.036 | |
| establishment of planar polarity | GO:0001736 | 87 | 0.036 | |
| cell maturation | GO:0048469 | 144 | 0.036 | Fly |
| oocyte development | GO:0048599 | 124 | 0.036 | |
| locomotory behavior | GO:0007626 | 176 | 0.035 | |
| digestive tract morphogenesis | GO:0048546 | 127 | 0.035 | |
| transcription from rna polymerase ii promoter | GO:0006366 | 368 | 0.035 | |
| embryo development ending in birth or egg hatching | GO:0009792 | 152 | 0.035 | |
| regulation of phosphorus metabolic process | GO:0051174 | 210 | 0.034 | |
| ubiquitin dependent protein catabolic process | GO:0006511 | 78 | 0.033 | |
| epithelial cell development | GO:0002064 | 274 | 0.032 | |
| tripartite regional subdivision | GO:0007351 | 103 | 0.032 | |
| protein catabolic process | GO:0030163 | 101 | 0.031 | |
| negative regulation of wnt signaling pathway | GO:0030178 | 28 | 0.031 | |
| cellular response to oxygen containing compound | GO:1901701 | 79 | 0.031 | |
| negative regulation of cardioblast differentiation | GO:0051892 | 7 | 0.030 | |
| regulation of mapk cascade | GO:0043408 | 92 | 0.029 | |
| cellular response to organic substance | GO:0071310 | 132 | 0.029 | |
| regulation of heart induction | GO:0090381 | 3 | 0.028 | |
| molting cycle | GO:0042303 | 56 | 0.028 | |
| eye photoreceptor cell differentiation | GO:0001754 | 145 | 0.028 | |
| protein targeting to nucleus | GO:0044744 | 51 | 0.028 | |
| regulation of cardioblast cell fate specification | GO:0042686 | 8 | 0.028 | |
| stem cell maintenance | GO:0019827 | 67 | 0.028 | |
| reproductive system development | GO:0061458 | 74 | 0.027 | |
| tube morphogenesis | GO:0035239 | 191 | 0.027 | |
| response to biotic stimulus | GO:0009607 | 294 | 0.026 | |
| equator specification | GO:0045317 | 4 | 0.025 | |
| limb development | GO:0060173 | 1 | 0.025 | |
| neural retina development | GO:0003407 | 4 | 0.025 | |
| cellular response to hormone stimulus | GO:0032870 | 44 | 0.024 | |
| regulation of cell fate commitment | GO:0010453 | 29 | 0.024 | |
| telencephalon development | GO:0021537 | 2 | 0.023 | |
| gland development | GO:0048732 | 191 | 0.023 | |
| regulation of cellular localization | GO:0060341 | 136 | 0.023 | |
| regulation of spindle checkpoint | GO:0090231 | 2 | 0.023 | |
| cellular response to organic cyclic compound | GO:0071407 | 32 | 0.022 | |
| retina development in camera type eye | GO:0060041 | 4 | 0.021 | |
| establishment of epithelial cell polarity | GO:0090162 | 13 | 0.021 | |
| protein modification by small protein conjugation or removal | GO:0070647 | 106 | 0.021 | |
| organic substance transport | GO:0071702 | 257 | 0.021 | |
| urogenital system development | GO:0001655 | 72 | 0.021 | |
| regulation of stress activated protein kinase signaling cascade | GO:0070302 | 42 | 0.021 | |
| haltere disc development | GO:0035216 | 10 | 0.020 | |
| endoderm formation | GO:0001706 | 3 | 0.020 | |
| actin cytoskeleton organization | GO:0030036 | 206 | 0.020 | |
| negative regulation of transcription from rna polymerase ii promoter | GO:0000122 | 119 | 0.020 | |
| negative regulation of nervous system development | GO:0051961 | 92 | 0.020 | |
| positive regulation of protein import into nucleus translocation | GO:0033160 | 2 | 0.019 | |
| hemocyte differentiation | GO:0042386 | 38 | 0.019 | |
| meiotic chromosome movement towards spindle pole | GO:0016344 | 1 | 0.019 | |
| spinal cord development | GO:0021510 | 1 | 0.019 | |
| regulation of phosphatase activity | GO:0010921 | 3 | 0.018 | |
| heart induction | GO:0003129 | 3 | 0.018 | |
| stress granule disassembly | GO:0035617 | 1 | 0.018 | |
| regulation of cell proliferation | GO:0042127 | 163 | 0.018 | Fly |
| compound eye development | GO:0048749 | 307 | 0.018 | |
| second mitotic wave involved in compound eye morphogenesis | GO:0016330 | 7 | 0.018 | |
| protein import into nucleus | GO:0006606 | 51 | 0.018 | |
| compound eye photoreceptor cell differentiation | GO:0001751 | 140 | 0.018 | |
| cellular protein modification process | GO:0006464 | 438 | 0.017 | |
| negative regulation of signal transduction by p53 class mediator | GO:1901797 | 1 | 0.017 | |
| asymmetric protein localization | GO:0008105 | 33 | 0.017 | |
| regulation of proteolysis involved in cellular protein catabolic process | GO:1903050 | 44 | 0.017 | |
| anterior posterior axis specification follicular epithelium | GO:0030714 | 2 | 0.017 | |
| specification of organ identity | GO:0010092 | 3 | 0.017 | |
| lymph gland development | GO:0048542 | 28 | 0.016 | |
| response to nitrogen compound | GO:1901698 | 90 | 0.016 | |
| protein localization to nucleus | GO:0034504 | 55 | 0.016 | |
| cellular component assembly involved in morphogenesis | GO:0010927 | 151 | 0.016 | |
| cell division | GO:0051301 | 248 | 0.016 | |
| cellular macromolecule localization | GO:0070727 | 220 | 0.016 | |
| response to bacterium | GO:0009617 | 198 | 0.016 | |
| developmental growth involved in morphogenesis | GO:0060560 | 65 | 0.015 | |
| establishment of epithelial cell apical basal polarity | GO:0045198 | 10 | 0.015 | |
| anterior posterior axis specification embryo | GO:0008595 | 103 | 0.015 | |
| regulation of jnk cascade | GO:0046328 | 40 | 0.015 | |
| wound healing | GO:0042060 | 75 | 0.015 | |
| dorsal closure leading edge cell differentiation | GO:0046663 | 2 | 0.015 | |
| regulation of cellular protein metabolic process | GO:0032268 | 243 | 0.015 | |
| anatomical structure homeostasis | GO:0060249 | 97 | 0.015 | |
| intracellular transport | GO:0046907 | 228 | 0.015 | |
| negative regulation of nucleic acid templated transcription | GO:1903507 | 240 | 0.015 | |
| embryonic morphogenesis | GO:0048598 | 206 | 0.015 | |
| regulation of intracellular transport | GO:0032386 | 64 | 0.015 | |
| negative regulation of intrinsic apoptotic signaling pathway | GO:2001243 | 1 | 0.014 | |
| response to radiation | GO:0009314 | 155 | 0.014 | |
| oocyte morphogenesis | GO:0048601 | 3 | 0.014 | |
| columnar cuboidal epithelial cell development | GO:0002066 | 249 | 0.014 | |
| positive regulation of cell morphogenesis involved in differentiation | GO:0010770 | 12 | 0.014 | |
| response to mechanical stimulus | GO:0009612 | 28 | 0.014 | |
| chromatin remodeling at centromere | GO:0031055 | 3 | 0.014 | |
| positive regulation of translation | GO:0045727 | 12 | 0.014 | |
| meiotic nuclear envelope disassembly | GO:0051078 | 2 | 0.014 | |
| actin filament based movement | GO:0030048 | 26 | 0.014 | |
| positive regulation of protein metabolic process | GO:0051247 | 128 | 0.014 | |
| establishment of protein localization | GO:0045184 | 163 | 0.013 | |
| protein complex biogenesis | GO:0070271 | 201 | 0.013 | |
| single organism intracellular transport | GO:1902582 | 207 | 0.013 | |
| morphogenesis of a branching epithelium | GO:0061138 | 45 | 0.013 | |
| germarium derived cystoblast division | GO:0048142 | 3 | 0.013 | |
| eye morphogenesis | GO:0048592 | 260 | 0.013 | |
| regulation of homotypic cell cell adhesion | GO:0034110 | 2 | 0.013 | |
| dendrite regeneration | GO:0031104 | 2 | 0.013 | |
| proteolysis | GO:0006508 | 192 | 0.013 | |
| response to external biotic stimulus | GO:0043207 | 293 | 0.012 | |
| regulation of intracellular signal transduction | GO:1902531 | 236 | 0.012 | |
| phagocytosis | GO:0006909 | 215 | 0.012 | |
| cellular protein localization | GO:0034613 | 160 | 0.012 | |
| response to hormone | GO:0009725 | 45 | 0.012 | |
| regulation of planar cell polarity pathway involved in axis elongation | GO:2000040 | 2 | 0.012 | |
| body morphogenesis | GO:0010171 | 2 | 0.012 | |
| olfactory behavior | GO:0042048 | 97 | 0.012 | |
| regulation of cardioblast differentiation | GO:0051890 | 9 | 0.012 | |
| regulation of intracellular protein transport | GO:0033157 | 46 | 0.012 | |
| catabolic process | GO:0009056 | 409 | 0.011 | |
| regulation of protein metabolic process | GO:0051246 | 256 | 0.011 | |
| organ induction | GO:0001759 | 3 | 0.011 | |
| negative regulation of cellular metabolic process | GO:0031324 | 382 | 0.011 | |
| syncytial blastoderm mitotic cell cycle | GO:0035186 | 21 | 0.011 | |
| synaptic growth at neuromuscular junction | GO:0051124 | 119 | 0.011 | |
| proteasomal protein catabolic process | GO:0010498 | 59 | 0.011 | |
| macromolecule catabolic process | GO:0009057 | 161 | 0.011 | |
| negative regulation of immune system process | GO:0002683 | 50 | 0.011 | |
| regulation of anatomical structure morphogenesis | GO:0022603 | 242 | 0.011 | |
| growth | GO:0040007 | 359 | 0.011 | |
| negative regulation of nucleoside metabolic process | GO:0045978 | 1 | 0.011 | |
| regulation of phosphorylation | GO:0042325 | 147 | 0.011 | |
| asymmetric cell division | GO:0008356 | 37 | 0.011 | |
| positive regulation of viral process | GO:0048524 | 2 | 0.011 | |
| protein transport | GO:0015031 | 155 | 0.011 | |
| imaginal disc derived leg segmentation | GO:0036011 | 26 | 0.011 | |
| positive regulation of stem cell maintenance | GO:1902459 | 1 | 0.011 | |
| cellular amide metabolic process | GO:0043603 | 80 | 0.010 | |
| proteolysis involved in cellular protein catabolic process | GO:0051603 | 83 | 0.010 | |
| maternal determination of dorsal ventral axis ovarian follicular epithelium germ line encoded | GO:0008070 | 2 | 0.010 | |
| regulation of immune system process | GO:0002682 | 176 | 0.010 | |
| regulation of molecular function | GO:0065009 | 217 | 0.010 | |
| skeletal muscle organ development | GO:0060538 | 48 | 0.010 | |
| muscle tissue development | GO:0060537 | 30 | 0.010 | |
| tissue migration | GO:0090130 | 155 | 0.010 | |
| wing disc dorsal ventral pattern formation | GO:0048190 | 47 | 0.010 | |
| instar larval development | GO:0002168 | 55 | 0.010 | |
| central nervous system projection neuron axonogenesis | GO:0021952 | 6 | 0.010 | |
| nephron development | GO:0072006 | 3 | 0.010 | |
| regulation of response to stress | GO:0080134 | 200 | 0.010 | |