| transcription from rna polymerase ii promoter | GO:0006366 | 368 | 0.612 | Human Yeast |
| regulation of cell cycle process | GO:0010564 | 181 | 0.360 | |
| mitotic dna integrity checkpoint | GO:0044774 | 75 | 0.317 | |
| negative regulation of cellular macromolecule biosynthetic process | GO:2000113 | 267 | 0.316 | |
| positive regulation of macromolecule metabolic process | GO:0010604 | 405 | 0.274 | |
| negative regulation of biosynthetic process | GO:0009890 | 277 | 0.269 | |
| regulation of meiosis | GO:0040020 | 3 | 0.259 | |
| meiotic nuclear division | GO:0007126 | 151 | 0.249 | |
| positive regulation of gene expression | GO:0010628 | 290 | 0.239 | |
| regulation of transcription from rna polymerase ii promoter | GO:0006357 | 378 | 0.237 | |
| negative regulation of cellular biosynthetic process | GO:0031327 | 277 | 0.234 | |
| negative regulation of macromolecule biosynthetic process | GO:0010558 | 270 | 0.214 | |
| dna damage checkpoint | GO:0000077 | 78 | 0.194 | |
| rna splicing via transesterification reactions with bulged adenosine as nucleophile | GO:0000377 | 73 | 0.193 | |
| rna processing | GO:0006396 | 147 | 0.192 | |
| positive regulation of rna biosynthetic process | GO:1902680 | 266 | 0.187 | |
| mitotic g2 dna damage checkpoint | GO:0007095 | 69 | 0.171 | |
| regulation of cell cycle | GO:0051726 | 291 | 0.167 | |
| positive regulation of biosynthetic process | GO:0009891 | 316 | 0.164 | |
| positive regulation of macromolecule biosynthetic process | GO:0010557 | 283 | 0.163 | |
| negative regulation of gene expression | GO:0010629 | 387 | 0.158 | |
| positive regulation of rna metabolic process | GO:0051254 | 271 | 0.147 | |
| growth | GO:0040007 | 359 | 0.143 | |
| embryo development ending in birth or egg hatching | GO:0009792 | 152 | 0.141 | Worm |
| positive regulation of nucleobase containing compound metabolic process | GO:0045935 | 332 | 0.139 | |
| mitotic cell cycle phase transition | GO:0044772 | 138 | 0.139 | |
| reproductive structure development | GO:0048608 | 74 | 0.137 | Worm |
| positive regulation of cellular biosynthetic process | GO:0031328 | 316 | 0.136 | |
| positive regulation of nitrogen compound metabolic process | GO:0051173 | 354 | 0.128 | |
| negative regulation of cellular metabolic process | GO:0031324 | 382 | 0.126 | |
| meiotic cell cycle | GO:0051321 | 171 | 0.124 | |
| mitotic g2 m transition checkpoint | GO:0044818 | 70 | 0.123 | |
| positive regulation of transcription from rna polymerase ii promoter | GO:0045944 | 204 | 0.123 | |
| regulation of mitotic cell cycle phase transition | GO:1901990 | 130 | 0.119 | |
| programmed cell death | GO:0012501 | 257 | 0.109 | |
| positive regulation of nucleic acid templated transcription | GO:1903508 | 266 | 0.109 | |
| organelle fission | GO:0048285 | 340 | 0.106 | |
| regulation of cell cycle phase transition | GO:1901987 | 130 | 0.094 | |
| negative regulation of nucleic acid templated transcription | GO:1903507 | 240 | 0.092 | |
| negative regulation of cell cycle process | GO:0010948 | 109 | 0.091 | |
| positive regulation of transcription dna templated | GO:0045893 | 266 | 0.088 | |
| regulation of organelle organization | GO:0033043 | 196 | 0.083 | |
| negative regulation of purine nucleotide catabolic process | GO:0033122 | 1 | 0.083 | |
| rna splicing | GO:0008380 | 83 | 0.083 | |
| regulation of mapk cascade | GO:0043408 | 92 | 0.078 | |
| cell cycle phase transition | GO:0044770 | 140 | 0.077 | |
| endocytosis | GO:0006897 | 310 | 0.073 | Worm |
| negative regulation of mitotic cell cycle phase transition | GO:1901991 | 103 | 0.070 | |
| nuclear division | GO:0000280 | 332 | 0.067 | |
| mitotic cell cycle checkpoint | GO:0007093 | 88 | 0.067 | |
| mrna processing | GO:0006397 | 104 | 0.067 | |
| regulation of nuclear division | GO:0051783 | 58 | 0.065 | |
| regulation of phosphorus metabolic process | GO:0051174 | 210 | 0.065 | |
| catabolic process | GO:0009056 | 409 | 0.064 | |
| macromolecule catabolic process | GO:0009057 | 161 | 0.063 | |
| regulation of rna splicing | GO:0043484 | 69 | 0.060 | |
| dna integrity checkpoint | GO:0031570 | 81 | 0.059 | |
| negative regulation of cell cycle phase transition | GO:1901988 | 103 | 0.057 | |
| intracellular signal transduction | GO:0035556 | 300 | 0.057 | |
| regulation of cellular protein metabolic process | GO:0032268 | 243 | 0.057 | |
| development of primary sexual characteristics | GO:0045137 | 50 | 0.055 | Worm |
| chromatin organization | GO:0006325 | 207 | 0.055 | |
| regulation of intracellular signal transduction | GO:1902531 | 236 | 0.052 | |
| regulation of meiotic cell cycle | GO:0051445 | 9 | 0.052 | |
| negative regulation of rna metabolic process | GO:0051253 | 251 | 0.052 | |
| mitotic dna damage checkpoint | GO:0044773 | 74 | 0.051 | |
| cellular protein modification process | GO:0006464 | 438 | 0.050 | |
| cell cycle checkpoint | GO:0000075 | 95 | 0.049 | |
| cell division | GO:0051301 | 248 | 0.048 | |
| response to organic substance | GO:0010033 | 284 | 0.046 | |
| protein modification process | GO:0036211 | 438 | 0.046 | |
| negative regulation of nitrogen compound metabolic process | GO:0051172 | 265 | 0.046 | |
| rna splicing via transesterification reactions | GO:0000375 | 73 | 0.046 | |
| spindle organization | GO:0007051 | 253 | 0.045 | |
| cellular response to chemical stimulus | GO:0070887 | 199 | 0.045 | |
| apoptotic process | GO:0006915 | 159 | 0.044 | |
| negative regulation of nucleobase containing compound metabolic process | GO:0045934 | 261 | 0.044 | |
| organic substance catabolic process | GO:1901575 | 308 | 0.043 | |
| regulation of cell proliferation | GO:0042127 | 163 | 0.042 | |
| cell proliferation | GO:0008283 | 299 | 0.042 | |
| small gtpase mediated signal transduction | GO:0007264 | 88 | 0.040 | |
| g2 dna damage checkpoint | GO:0031572 | 69 | 0.038 | |
| mrna cis splicing via spliceosome | GO:0045292 | 1 | 0.038 | |
| intermediate filament based process | GO:0045103 | 1 | 0.038 | |
| vesicle mediated transport | GO:0016192 | 381 | 0.037 | Worm |
| regulation of mitotic cell cycle | GO:0007346 | 190 | 0.037 | |
| ncrna metabolic process | GO:0034660 | 43 | 0.036 | |
| reproductive system development | GO:0061458 | 74 | 0.036 | Worm |
| negative regulation of transcription dna templated | GO:0045892 | 237 | 0.036 | |
| positive regulation of cell communication | GO:0010647 | 250 | 0.036 | |
| death | GO:0016265 | 284 | 0.035 | |
| localization of cell | GO:0051674 | 257 | 0.035 | |
| dna templated transcription elongation | GO:0006354 | 18 | 0.034 | |
| regulation of immune system process | GO:0002682 | 176 | 0.034 | |
| alternative mrna splicing via spliceosome | GO:0000380 | 60 | 0.034 | |
| mrna splicing via spliceosome | GO:0000398 | 73 | 0.033 | |
| negative regulation of cell cycle | GO:0045786 | 116 | 0.032 | |
| regulation of alternative mrna splicing via spliceosome | GO:0000381 | 60 | 0.031 | |
| compound eye development | GO:0048749 | 307 | 0.031 | |
| dna methylation on cytosine | GO:0032776 | 1 | 0.029 | |
| regulation of ruffle assembly | GO:1900027 | 1 | 0.028 | |
| negative regulation of mitotic cell cycle | GO:0045930 | 109 | 0.028 | |
| negative regulation of intrinsic apoptotic signaling pathway | GO:2001243 | 1 | 0.028 | |
| organonitrogen compound metabolic process | GO:1901564 | 318 | 0.028 | |
| positive regulation of signaling | GO:0023056 | 243 | 0.028 | |
| regulation of growth | GO:0040008 | 233 | 0.028 | |
| regulation of cell death | GO:0010941 | 173 | 0.027 | |
| positive regulation of signal transduction | GO:0009967 | 223 | 0.027 | |
| regulation of programmed cell death | GO:0043067 | 152 | 0.026 | |
| positive regulation of rho protein signal transduction | GO:0035025 | 4 | 0.025 | |
| positive regulation of response to stimulus | GO:0048584 | 323 | 0.025 | |
| nucleobase containing compound catabolic process | GO:0034655 | 165 | 0.025 | |
| posttranscriptional regulation of gene expression | GO:0010608 | 145 | 0.025 | |
| positive regulation of phosphorylation | GO:0042327 | 87 | 0.025 | |
| mapk cascade | GO:0000165 | 107 | 0.023 | |
| regulation of hydrolase activity | GO:0051336 | 97 | 0.023 | |
| regulation of response to stress | GO:0080134 | 200 | 0.023 | |
| cell motility | GO:0048870 | 251 | 0.023 | |
| gonad development | GO:0008406 | 50 | 0.023 | Worm |
| septin cytoskeleton organization | GO:0032185 | 1 | 0.023 | |
| proteolysis | GO:0006508 | 192 | 0.022 | |
| cellular macromolecule catabolic process | GO:0044265 | 136 | 0.022 | |
| mrna catabolic process | GO:0006402 | 33 | 0.022 | |
| embryonic pattern specification | GO:0009880 | 174 | 0.022 | |
| response to nitrogen compound | GO:1901698 | 90 | 0.022 | |
| mrna metabolic process | GO:0016071 | 124 | 0.021 | |
| regulation of phosphate metabolic process | GO:0019220 | 210 | 0.021 | |
| cell death | GO:0008219 | 279 | 0.021 | |
| defense response | GO:0006952 | 300 | 0.021 | |
| larval development | GO:0002164 | 104 | 0.020 | Worm |
| positive regulation of neuron projection regeneration | GO:0070572 | 3 | 0.020 | |
| regulation of protein metabolic process | GO:0051246 | 256 | 0.020 | |
| peptidyl lysine modification | GO:0018205 | 57 | 0.019 | |
| regulation of hemocyte proliferation | GO:0035206 | 37 | 0.019 | |
| formation of a compartment boundary | GO:0060288 | 4 | 0.019 | |
| modification of morphology or physiology of other organism | GO:0035821 | 1 | 0.019 | |
| cellular response to organic substance | GO:0071310 | 132 | 0.018 | |
| sex differentiation | GO:0007548 | 81 | 0.018 | Worm |
| ncrna processing | GO:0034470 | 30 | 0.018 | |
| developmental growth | GO:0048589 | 280 | 0.017 | |
| signal transduction by phosphorylation | GO:0023014 | 107 | 0.017 | |
| intermediate filament cytoskeleton organization | GO:0045104 | 1 | 0.017 | |
| protein complex biogenesis | GO:0070271 | 201 | 0.017 | |
| ras protein signal transduction | GO:0007265 | 88 | 0.017 | |
| small molecule metabolic process | GO:0044281 | 305 | 0.017 | |
| negative regulation of rna biosynthetic process | GO:1902679 | 240 | 0.016 | |
| organelle assembly | GO:0070925 | 198 | 0.016 | |
| nuclear transcribed mrna catabolic process | GO:0000956 | 24 | 0.016 | |
| positive regulation of phosphorus metabolic process | GO:0010562 | 139 | 0.016 | |
| regulation of mrna metabolic process | GO:1903311 | 72 | 0.015 | |
| ribonucleoprotein complex biogenesis | GO:0022613 | 31 | 0.015 | |
| regulation of multicellular organismal development | GO:2000026 | 414 | 0.015 | Worm |
| peptidyl serine phosphorylation | GO:0018105 | 7 | 0.015 | |
| positive regulation of intracellular signal transduction | GO:1902533 | 116 | 0.015 | |
| regulation of localization | GO:0032879 | 275 | 0.014 | |
| establishment of localization in cell | GO:0051649 | 402 | 0.014 | |
| negative regulation of transcription factor import into nucleus | GO:0042992 | 4 | 0.014 | |
| left right axis specification | GO:0070986 | 1 | 0.014 | |
| cytoplasmic sequestering of nf kappab | GO:0007253 | 1 | 0.014 | |
| phagocytosis | GO:0006909 | 215 | 0.014 | |
| septin ring organization | GO:0031106 | 1 | 0.014 | |
| organic cyclic compound catabolic process | GO:1901361 | 168 | 0.013 | |
| aromatic compound catabolic process | GO:0019439 | 166 | 0.013 | |
| negative regulation of protein binding | GO:0032091 | 1 | 0.013 | |
| genitalia development | GO:0048806 | 26 | 0.013 | Worm |
| regulation of cell division | GO:0051302 | 72 | 0.013 | |
| ovulation cycle | GO:0042698 | 1 | 0.013 | |
| fatty acid derivative biosynthetic process | GO:1901570 | 1 | 0.013 | |
| regulation of cdc42 protein signal transduction | GO:0032489 | 3 | 0.012 | |
| regulation of apoptotic process | GO:0042981 | 130 | 0.012 | |
| positive regulation of developmental process | GO:0051094 | 143 | 0.012 | |
| cellular response to nutrient | GO:0031670 | 1 | 0.012 | |
| cell migration | GO:0016477 | 238 | 0.012 | |
| regionalization | GO:0003002 | 416 | 0.012 | |
| regulation of membrane potential in photoreceptor cell | GO:0016057 | 4 | 0.012 | |
| purine containing compound metabolic process | GO:0072521 | 155 | 0.011 | |
| regulation of mrna splicing via spliceosome | GO:0048024 | 64 | 0.011 | |
| cellular response to dna damage stimulus | GO:0006974 | 223 | 0.011 | |
| synaptonemal complex disassembly | GO:0070194 | 1 | 0.011 | |
| single organism behavior | GO:0044708 | 391 | 0.011 | |
| cellular catabolic process | GO:0044248 | 372 | 0.011 | |
| transcription elongation from rna polymerase ii promoter | GO:0006368 | 18 | 0.011 | |
| negative regulation of nucleoside metabolic process | GO:0045978 | 1 | 0.011 | |
| negative regulation of eye photoreceptor cell development | GO:0042480 | 3 | 0.011 | |
| eye development | GO:0001654 | 323 | 0.010 | |
| protein modification by small protein conjugation | GO:0032446 | 79 | 0.010 | |
| regulation of phosphorylation | GO:0042325 | 147 | 0.010 | |
