| regulation of transcription from rna polymerase ii promoter | GO:0006357 | 378 | 0.677 | |
| establishment of localization in cell | GO:0051649 | 402 | 0.446 | |
| single organism intracellular transport | GO:1902582 | 207 | 0.275 | |
| transcription from rna polymerase ii promoter | GO:0006366 | 368 | 0.269 | |
| intracellular transport | GO:0046907 | 228 | 0.246 | |
| positive regulation of transcription from rna polymerase ii promoter | GO:0045944 | 204 | 0.244 | |
| mitotic g2 m transition checkpoint | GO:0044818 | 70 | 0.229 | |
| positive regulation of gene expression | GO:0010628 | 290 | 0.222 | |
| organic substance transport | GO:0071702 | 257 | 0.221 | |
| protein modification process | GO:0036211 | 438 | 0.220 | |
| actin filament based process | GO:0030029 | 220 | 0.212 | |
| positive regulation of nitrogen compound metabolic process | GO:0051173 | 354 | 0.207 | |
| negative regulation of cellular metabolic process | GO:0031324 | 382 | 0.195 | |
| regulation of catabolic process | GO:0009894 | 170 | 0.163 | |
| cellular protein modification process | GO:0006464 | 438 | 0.155 | |
| negative regulation of immune system process | GO:0002683 | 50 | 0.141 | |
| positive regulation of nucleobase containing compound metabolic process | GO:0045935 | 332 | 0.134 | |
| small molecule metabolic process | GO:0044281 | 305 | 0.126 | |
| protein modification by small protein conjugation or removal | GO:0070647 | 106 | 0.120 | |
| regulation of transport | GO:0051049 | 181 | 0.117 | |
| regulation of cellular component biogenesis | GO:0044087 | 201 | 0.105 | |
| muscle structure development | GO:0061061 | 224 | 0.104 | |
| protein complex assembly | GO:0006461 | 200 | 0.100 | |
| organophosphate catabolic process | GO:0046434 | 112 | 0.099 | |
| positive regulation of transcription dna templated | GO:0045893 | 266 | 0.089 | |
| g2 dna damage checkpoint | GO:0031572 | 69 | 0.086 | |
| vesicle mediated transport | GO:0016192 | 381 | 0.084 | |
| regulation of cellular catabolic process | GO:0031329 | 157 | 0.084 | |
| regulation of cell cycle | GO:0051726 | 291 | 0.083 | |
| positive regulation of macromolecule metabolic process | GO:0010604 | 405 | 0.083 | |
| mitotic g2 dna damage checkpoint | GO:0007095 | 69 | 0.080 | |
| golgi to plasma membrane protein transport | GO:0043001 | 8 | 0.078 | |
| negative regulation of nucleobase containing compound metabolic process | GO:0045934 | 261 | 0.075 | |
| dna templated transcription initiation | GO:0006352 | 25 | 0.075 | |
| regulation of cytoplasmic transport | GO:1903649 | 47 | 0.075 | |
| cytoplasmic transport | GO:0016482 | 130 | 0.075 | |
| developmental maturation | GO:0021700 | 172 | 0.073 | |
| negative regulation of cell cycle | GO:0045786 | 116 | 0.072 | |
| positive regulation of nucleoside metabolic process | GO:0045979 | 47 | 0.072 | |
| dna damage checkpoint | GO:0000077 | 78 | 0.072 | |
| negative regulation of macromolecule biosynthetic process | GO:0010558 | 270 | 0.071 | |
| negative regulation of nitrogen compound metabolic process | GO:0051172 | 265 | 0.069 | |
| defense response | GO:0006952 | 300 | 0.068 | |
| regulation of organelle organization | GO:0033043 | 196 | 0.068 | |
| cell cycle checkpoint | GO:0000075 | 95 | 0.067 | |
| negative regulation of biosynthetic process | GO:0009890 | 277 | 0.064 | |
| nucleocytoplasmic transport | GO:0006913 | 72 | 0.061 | |
| regulation of hydrolase activity | GO:0051336 | 97 | 0.061 | |
| protein dna complex subunit organization | GO:0071824 | 86 | 0.059 | |
| protein transport | GO:0015031 | 155 | 0.059 | |
| secretion by cell | GO:0032940 | 101 | 0.058 | |
| regulation of immune system process | GO:0002682 | 176 | 0.058 | |
| regulation of purine nucleotide metabolic process | GO:1900542 | 62 | 0.058 | |
| negative regulation of rna biosynthetic process | GO:1902679 | 240 | 0.058 | |
| mitotic cell cycle checkpoint | GO:0007093 | 88 | 0.056 | |
| regulation of nucleoside metabolic process | GO:0009118 | 50 | 0.054 | |
| negative regulation of response to stimulus | GO:0048585 | 258 | 0.053 | |
| endocytosis | GO:0006897 | 310 | 0.053 | |
| regulation of localization | GO:0032879 | 275 | 0.053 | |
| mitotic dna damage checkpoint | GO:0044773 | 74 | 0.052 | |
| defense response to other organism | GO:0098542 | 225 | 0.051 | |
| positive regulation of purine nucleotide metabolic process | GO:1900544 | 55 | 0.050 | |
| protein localization to nucleus | GO:0034504 | 55 | 0.050 | |
| regulation of protein modification process | GO:0031399 | 112 | 0.049 | |
| establishment of protein localization | GO:0045184 | 163 | 0.049 | |
| actin cytoskeleton organization | GO:0030036 | 206 | 0.049 | |
| positive regulation of nucleotide catabolic process | GO:0030813 | 46 | 0.047 | |
| regulation of gtpase activity | GO:0043087 | 44 | 0.046 | |
| regulation of cellular localization | GO:0060341 | 136 | 0.046 | |
| purine ribonucleoside catabolic process | GO:0046130 | 112 | 0.046 | |
| cellular protein complex assembly | GO:0043623 | 71 | 0.045 | |
| positive regulation of rna biosynthetic process | GO:1902680 | 266 | 0.045 | |
| organonitrogen compound metabolic process | GO:1901564 | 318 | 0.044 | |
| regulation of vesicle mediated transport | GO:0060627 | 59 | 0.043 | |
| macromolecular complex assembly | GO:0065003 | 256 | 0.043 | |
| regulation of protein metabolic process | GO:0051246 | 256 | 0.043 | |
| positive regulation of nucleic acid templated transcription | GO:1903508 | 266 | 0.043 | |
| dna integrity checkpoint | GO:0031570 | 81 | 0.041 | |
| positive regulation of rna metabolic process | GO:0051254 | 271 | 0.038 | |
| single organism biosynthetic process | GO:0044711 | 206 | 0.038 | |
| protein complex biogenesis | GO:0070271 | 201 | 0.037 | |
| regulation of innate immune response | GO:0045088 | 71 | 0.036 | |
| positive regulation of macromolecule biosynthetic process | GO:0010557 | 283 | 0.036 | |
| protein localization | GO:0008104 | 284 | 0.034 | |
| nuclear division | GO:0000280 | 332 | 0.034 | |
| protein acetylation | GO:0006473 | 39 | 0.034 | |
| regulation of molecular function | GO:0065009 | 217 | 0.033 | |
| regulation of nucleotide metabolic process | GO:0006140 | 62 | 0.032 | |
| regulation of response to stress | GO:0080134 | 200 | 0.032 | |
| striated muscle cell differentiation | GO:0051146 | 90 | 0.032 | |
| positive regulation of purine nucleotide catabolic process | GO:0033123 | 46 | 0.032 | |
| histone acetylation | GO:0016573 | 38 | 0.032 | |
| cell maturation | GO:0048469 | 144 | 0.032 | |
| negative regulation of rna metabolic process | GO:0051253 | 251 | 0.032 | |
| regulation of purine nucleotide catabolic process | GO:0033121 | 48 | 0.032 | |
| protein modification by small protein removal | GO:0070646 | 28 | 0.032 | |
| intracellular signal transduction | GO:0035556 | 300 | 0.032 | |
| negative regulation of cellular component organization | GO:0051129 | 108 | 0.031 | |
| organelle assembly | GO:0070925 | 198 | 0.031 | |
| ribonucleoside metabolic process | GO:0009119 | 127 | 0.031 | |
| regulation of cellular protein metabolic process | GO:0032268 | 243 | 0.030 | |
| regulation of intracellular transport | GO:0032386 | 64 | 0.029 | |
| purine ribonucleotide catabolic process | GO:0009154 | 109 | 0.029 | |
| embryo development ending in birth or egg hatching | GO:0009792 | 152 | 0.029 | Worm |
| secondary metabolic process | GO:0019748 | 75 | 0.028 | |
| membrane organization | GO:0061024 | 112 | 0.028 | |
| regulation of gtp catabolic process | GO:0033124 | 44 | 0.027 | |
| regulation of catalytic activity | GO:0050790 | 185 | 0.027 | |
| chromatin remodeling | GO:0006338 | 72 | 0.027 | |
| cellular protein localization | GO:0034613 | 160 | 0.026 | |
| purine nucleotide catabolic process | GO:0006195 | 109 | 0.025 | |
| negative regulation of cellular biosynthetic process | GO:0031327 | 277 | 0.025 | |
| positive regulation of gtp catabolic process | GO:0033126 | 43 | 0.025 | |
| regulation of cell development | GO:0060284 | 215 | 0.025 | |
| response to reactive oxygen species | GO:0000302 | 24 | 0.024 | |
| organelle fission | GO:0048285 | 340 | 0.024 | |
| oocyte development | GO:0048599 | 124 | 0.024 | |
| single organism catabolic process | GO:0044712 | 228 | 0.024 | |
| regulation of apoptotic process | GO:0042981 | 130 | 0.023 | |
| positive regulation of ras gtpase activity | GO:0032320 | 36 | 0.023 | |
| epithelial cell differentiation | GO:0030855 | 322 | 0.022 | |
| purine nucleoside triphosphate catabolic process | GO:0009146 | 108 | 0.022 | |
| dorsal ventral pattern formation | GO:0009953 | 133 | 0.022 | |
| nucleoside triphosphate metabolic process | GO:0009141 | 120 | 0.022 | |
| regulation of mitosis | GO:0007088 | 56 | 0.021 | |
| cellular nitrogen compound catabolic process | GO:0044270 | 165 | 0.021 | |
| nucleotide catabolic process | GO:0009166 | 109 | 0.021 | |
| oocyte construction | GO:0007308 | 112 | 0.021 | |
| positive regulation of nucleotide metabolic process | GO:0045981 | 55 | 0.020 | |
| negative regulation of mitotic cell cycle phase transition | GO:1901991 | 103 | 0.020 | |
| regulation of intracellular signal transduction | GO:1902531 | 236 | 0.020 | |
| guanosine containing compound catabolic process | GO:1901069 | 74 | 0.020 | |
| chromatin modification | GO:0016568 | 147 | 0.020 | |
| oxidation reduction process | GO:0055114 | 123 | 0.020 | |
| stem cell development | GO:0048864 | 79 | 0.019 | |
| regulation of mitotic cell cycle | GO:0007346 | 190 | 0.019 | |
| columnar cuboidal epithelial cell development | GO:0002066 | 249 | 0.019 | |
| synaptic transmission | GO:0007268 | 288 | 0.018 | |
| cellular catabolic process | GO:0044248 | 372 | 0.018 | |
| neuromuscular synaptic transmission | GO:0007274 | 67 | 0.018 | |
| response to oxidative stress | GO:0006979 | 86 | 0.018 | |
| organophosphate metabolic process | GO:0019637 | 195 | 0.018 | |
| establishment of rna localization | GO:0051236 | 47 | 0.018 | |
| epithelial cell development | GO:0002064 | 274 | 0.017 | |
| response to other organism | GO:0051707 | 293 | 0.017 | |
| regulation of cellular response to stress | GO:0080135 | 89 | 0.017 | |
| protein import into nucleus | GO:0006606 | 51 | 0.017 | |
| positive regulation of catabolic process | GO:0009896 | 105 | 0.017 | |
| protein secretion | GO:0009306 | 45 | 0.017 | |
| heterocycle catabolic process | GO:0046700 | 166 | 0.017 | |
| positive regulation of growth | GO:0045927 | 75 | 0.016 | Worm |
| regulation of golgi to plasma membrane protein transport | GO:0042996 | 6 | 0.016 | |
| positive regulation of biosynthetic process | GO:0009891 | 316 | 0.016 | |
| positive regulation of cellular biosynthetic process | GO:0031328 | 316 | 0.016 | |
| response to oxygen containing compound | GO:1901700 | 200 | 0.016 | |
| positive regulation of gtpase activity | GO:0043547 | 43 | 0.016 | |
| oocyte axis specification | GO:0007309 | 108 | 0.016 | |
| negative regulation of cell cycle process | GO:0010948 | 109 | 0.015 | |
| inositol lipid mediated signaling | GO:0048017 | 4 | 0.015 | |
| ensheathment of neurons | GO:0007272 | 10 | 0.015 | |
| peptidyl lysine acetylation | GO:0018394 | 39 | 0.015 | |
| nuclear transport | GO:0051169 | 72 | 0.015 | |
| cellular macromolecular complex assembly | GO:0034622 | 153 | 0.015 | |
| organic cyclic compound catabolic process | GO:1901361 | 168 | 0.015 | |
| nucleoside phosphate metabolic process | GO:0006753 | 162 | 0.015 | |
| defense response to gram negative bacterium | GO:0050829 | 94 | 0.015 | |
| purine nucleotide metabolic process | GO:0006163 | 146 | 0.015 | |
| ribonucleoside triphosphate metabolic process | GO:0009199 | 119 | 0.015 | |
| positive regulation of cellular component organization | GO:0051130 | 156 | 0.015 | |
| guanosine containing compound metabolic process | GO:1901068 | 74 | 0.015 | |
| positive regulation of response to stimulus | GO:0048584 | 323 | 0.014 | |
| cell proliferation | GO:0008283 | 299 | 0.014 | |
| catabolic process | GO:0009056 | 409 | 0.014 | |
| cellular response to chemical stimulus | GO:0070887 | 199 | 0.014 | |
| chromatin organization | GO:0006325 | 207 | 0.014 | |
| rna localization | GO:0006403 | 115 | 0.014 | |
| synapse organization | GO:0050808 | 196 | 0.014 | |
| ras protein signal transduction | GO:0007265 | 88 | 0.014 | |
| organonitrogen compound catabolic process | GO:1901565 | 128 | 0.014 | |
| nucleotide metabolic process | GO:0009117 | 161 | 0.014 | |
| gtp catabolic process | GO:0006184 | 72 | 0.014 | |
| hematopoietic or lymphoid organ development | GO:0048534 | 57 | 0.014 | |
| innate immune response | GO:0045087 | 144 | 0.013 | |
| striated muscle cell development | GO:0055002 | 50 | 0.013 | |
| ribonucleoside triphosphate catabolic process | GO:0009203 | 108 | 0.013 | |
| dna repair | GO:0006281 | 54 | 0.013 | |
| positive regulation of catalytic activity | GO:0043085 | 118 | 0.013 | |
| g protein coupled receptor signaling pathway | GO:0007186 | 136 | 0.013 | |
| response to bacterium | GO:0009617 | 198 | 0.013 | |
| regulation of ras gtpase activity | GO:0032318 | 38 | 0.013 | |
| positive regulation of protein modification process | GO:0031401 | 58 | 0.013 | |
| response to endogenous stimulus | GO:0009719 | 119 | 0.013 | |
| protein phosphorylation | GO:0006468 | 169 | 0.013 | |
| negative regulation of developmental process | GO:0051093 | 201 | 0.013 | |
| actomyosin structure organization | GO:0031032 | 56 | 0.013 | |
| cellular response to dna damage stimulus | GO:0006974 | 223 | 0.012 | |
| ribonucleotide catabolic process | GO:0009261 | 109 | 0.012 | |
| golgi vesicle transport | GO:0048193 | 27 | 0.012 | |
| mitotic dna integrity checkpoint | GO:0044774 | 75 | 0.012 | |
| nucleoside phosphate catabolic process | GO:1901292 | 110 | 0.012 | |
| protein catabolic process | GO:0030163 | 101 | 0.012 | |
| positive regulation of cellular catabolic process | GO:0031331 | 95 | 0.012 | |
| regulation of mitotic cell cycle phase transition | GO:1901990 | 130 | 0.012 | |
| purine nucleoside catabolic process | GO:0006152 | 112 | 0.012 | |
| positive regulation of cellular protein metabolic process | GO:0032270 | 118 | 0.012 | |
| defense response to bacterium | GO:0042742 | 178 | 0.012 | |
| protein modification by small protein conjugation | GO:0032446 | 79 | 0.012 | |
| peptidyl amino acid modification | GO:0018193 | 105 | 0.012 | |
| positive regulation of molecular function | GO:0044093 | 136 | 0.012 | |
| phagocytosis | GO:0006909 | 215 | 0.012 | |
| male meiosis cytokinesis | GO:0007112 | 26 | 0.012 | |
| secretion | GO:0046903 | 109 | 0.012 | |
| digestive tract development | GO:0048565 | 149 | 0.012 | |
| ribonucleotide metabolic process | GO:0009259 | 145 | 0.012 | |
| regulation of intracellular protein transport | GO:0033157 | 46 | 0.012 | |
| purine containing compound metabolic process | GO:0072521 | 155 | 0.012 | |
| positive regulation of transport | GO:0051050 | 92 | 0.012 | |
| regulation of establishment of protein localization | GO:0070201 | 61 | 0.011 | |
| cell division | GO:0051301 | 248 | 0.011 | |
| regulation of protein transport | GO:0051223 | 57 | 0.011 | |
| protein ubiquitination | GO:0016567 | 70 | 0.011 | |
| gastrulation with mouth forming first | GO:0001703 | 36 | 0.011 | |
| homeostatic process | GO:0042592 | 199 | 0.011 | |
| peptidyl lysine modification | GO:0018205 | 57 | 0.011 | |
| single organism nuclear import | GO:1902593 | 51 | 0.011 | |
| response to heat | GO:0009408 | 63 | 0.011 | |
| eye development | GO:0001654 | 323 | 0.011 | |
| organic substance catabolic process | GO:1901575 | 308 | 0.011 | |
| nucleoside catabolic process | GO:0009164 | 112 | 0.011 | |
| negative regulation of nucleic acid templated transcription | GO:1903507 | 240 | 0.011 | |
| connective tissue development | GO:0061448 | 3 | 0.011 | |
| purine ribonucleoside triphosphate metabolic process | GO:0009205 | 119 | 0.011 | |
| response to external biotic stimulus | GO:0043207 | 293 | 0.011 | |
| organic acid metabolic process | GO:0006082 | 103 | 0.011 | |
| transcription initiation from rna polymerase ii promoter | GO:0006367 | 25 | 0.011 | |
| single organism membrane organization | GO:0044802 | 93 | 0.011 | |
| columnar cuboidal epithelial cell differentiation | GO:0002065 | 256 | 0.011 | |
| nitrogen compound transport | GO:0071705 | 85 | 0.011 | |
| ribose phosphate metabolic process | GO:0019693 | 145 | 0.011 | |
| covalent chromatin modification | GO:0016569 | 106 | 0.010 | |
| instar larval development | GO:0002168 | 55 | 0.010 | |
| regulation of phosphorus metabolic process | GO:0051174 | 210 | 0.010 | |
| negative regulation of cellular macromolecule biosynthetic process | GO:2000113 | 267 | 0.010 | |
| internal peptidyl lysine acetylation | GO:0018393 | 38 | 0.010 | |
| regulation of nucleotide catabolic process | GO:0030811 | 48 | 0.010 | |
| macromolecule catabolic process | GO:0009057 | 161 | 0.010 | |
