| rrna processing | GO:0006364 | 3 | 0.748 | Yeast |
| rna processing | GO:0006396 | 147 | 0.281 | Yeast |
| organelle assembly | GO:0070925 | 198 | 0.230 | |
| establishment of localization in cell | GO:0051649 | 402 | 0.185 | |
| macromolecular complex assembly | GO:0065003 | 256 | 0.180 | |
| multicellular organismal reproductive behavior | GO:0033057 | 110 | 0.124 | |
| mrna catabolic process | GO:0006402 | 33 | 0.115 | |
| digestive system development | GO:0055123 | 149 | 0.108 | |
| cellular catabolic process | GO:0044248 | 372 | 0.101 | |
| organic cyclic compound catabolic process | GO:1901361 | 168 | 0.086 | |
| regulation of cell cycle | GO:0051726 | 291 | 0.086 | |
| establishment or maintenance of cell polarity | GO:0007163 | 167 | 0.082 | |
| dendrite development | GO:0016358 | 204 | 0.081 | |
| organelle localization | GO:0051640 | 148 | 0.081 | |
| ribonucleoprotein complex biogenesis | GO:0022613 | 31 | 0.080 | Yeast |
| nucleobase containing compound catabolic process | GO:0034655 | 165 | 0.076 | |
| cellular macromolecular complex assembly | GO:0034622 | 153 | 0.075 | |
| ribosome biogenesis | GO:0042254 | 8 | 0.072 | Yeast |
| cell division | GO:0051301 | 248 | 0.070 | |
| regulation of mitotic cell cycle | GO:0007346 | 190 | 0.066 | |
| cellular macromolecule localization | GO:0070727 | 220 | 0.065 | |
| ribonucleoprotein complex subunit organization | GO:0071826 | 28 | 0.065 | |
| vesicle mediated transport | GO:0016192 | 381 | 0.064 | Worm |
| heterocycle catabolic process | GO:0046700 | 166 | 0.063 | |
| larval development | GO:0002164 | 104 | 0.062 | Worm |
| mitotic g2 m transition checkpoint | GO:0044818 | 70 | 0.060 | |
| positive regulation of macromolecule metabolic process | GO:0010604 | 405 | 0.059 | |
| ribosomal large subunit biogenesis | GO:0042273 | 1 | 0.059 | Yeast |
| organic substance catabolic process | GO:1901575 | 308 | 0.056 | |
| regulation of protein metabolic process | GO:0051246 | 256 | 0.055 | |
| rna catabolic process | GO:0006401 | 37 | 0.055 | |
| positive regulation of rna metabolic process | GO:0051254 | 271 | 0.052 | |
| ncrna metabolic process | GO:0034660 | 43 | 0.051 | Yeast |
| macromolecule catabolic process | GO:0009057 | 161 | 0.049 | |
| positive regulation of cellular biosynthetic process | GO:0031328 | 316 | 0.047 | |
| rna localization | GO:0006403 | 115 | 0.047 | |
| multi organism behavior | GO:0051705 | 175 | 0.045 | |
| cell death | GO:0008219 | 279 | 0.045 | |
| regulation of cell cycle process | GO:0010564 | 181 | 0.045 | |
| mitotic dna damage checkpoint | GO:0044773 | 74 | 0.040 | |
| regulation of cellular protein metabolic process | GO:0032268 | 243 | 0.039 | |
| nuclear transcribed mrna catabolic process | GO:0000956 | 24 | 0.038 | |
| positive regulation of macromolecule biosynthetic process | GO:0010557 | 283 | 0.037 | |
| regulation of cell development | GO:0060284 | 215 | 0.037 | |
| response to abiotic stimulus | GO:0009628 | 341 | 0.036 | |
| programmed cell death | GO:0012501 | 257 | 0.035 | |
| negative regulation of cell cycle | GO:0045786 | 116 | 0.035 | |
| aromatic compound catabolic process | GO:0019439 | 166 | 0.034 | |
| nuclear transport | GO:0051169 | 72 | 0.034 | |
| mrna processing | GO:0006397 | 104 | 0.034 | |
| ribonucleoprotein complex assembly | GO:0022618 | 23 | 0.033 | |
| cytokinetic process | GO:0032506 | 27 | 0.033 | |
| cellular nitrogen compound catabolic process | GO:0044270 | 165 | 0.032 | |
| regulation of multicellular organismal development | GO:2000026 | 414 | 0.032 | |
| regulation of cell differentiation | GO:0045595 | 302 | 0.032 | |
| regulation of developmental growth | GO:0048638 | 174 | 0.032 | |
| regulation of transcription from rna polymerase ii promoter | GO:0006357 | 378 | 0.032 | |
| cell cell signaling involved in cell fate commitment | GO:0045168 | 210 | 0.031 | |
| catabolic process | GO:0009056 | 409 | 0.030 | |
| muscle structure development | GO:0061061 | 224 | 0.029 | |
| endocytosis | GO:0006897 | 310 | 0.029 | Worm |
| positive regulation of gene expression | GO:0010628 | 290 | 0.029 | |
| positive regulation of multicellular organismal process | GO:0051240 | 143 | 0.028 | |
| positive regulation of signal transduction | GO:0009967 | 223 | 0.028 | |
| protein modification process | GO:0036211 | 438 | 0.028 | |
| translation | GO:0006412 | 69 | 0.028 | |
| regulation of translation | GO:0006417 | 56 | 0.028 | |
| phosphorylation | GO:0016310 | 294 | 0.028 | |
| negative regulation of cellular metabolic process | GO:0031324 | 382 | 0.027 | |
| rna phosphodiester bond hydrolysis | GO:0090501 | 17 | 0.027 | |
| mrna metabolic process | GO:0016071 | 124 | 0.027 | |
| intracellular transport | GO:0046907 | 228 | 0.026 | |
| embryo development ending in birth or egg hatching | GO:0009792 | 152 | 0.026 | |
| mitotic g2 dna damage checkpoint | GO:0007095 | 69 | 0.026 | |
| dendrite morphogenesis | GO:0048813 | 199 | 0.025 | |
| positive regulation of signaling | GO:0023056 | 243 | 0.024 | |
| growth | GO:0040007 | 359 | 0.024 | |
| mitotic dna integrity checkpoint | GO:0044774 | 75 | 0.024 | |
| regulation of neuron differentiation | GO:0045664 | 103 | 0.024 | |
| cellular macromolecule catabolic process | GO:0044265 | 136 | 0.024 | |
| protein complex biogenesis | GO:0070271 | 201 | 0.024 | |
| nuclear import | GO:0051170 | 51 | 0.024 | |
| negative regulation of molecular function | GO:0044092 | 51 | 0.023 | |
| cellular protein complex assembly | GO:0043623 | 71 | 0.023 | |
| cytokinesis | GO:0000910 | 90 | 0.023 | |
| regulation of nervous system development | GO:0051960 | 248 | 0.022 | |
| establishment of cell polarity | GO:0030010 | 40 | 0.022 | |
| gland morphogenesis | GO:0022612 | 145 | 0.022 | |
| positive regulation of developmental process | GO:0051094 | 143 | 0.022 | |
| actin filament based process | GO:0030029 | 220 | 0.021 | |
| rna 3 end processing | GO:0031123 | 45 | 0.021 | |
| positive regulation of cell communication | GO:0010647 | 250 | 0.021 | |
| regulation of mrna processing | GO:0050684 | 71 | 0.021 | |
| regulation of organelle organization | GO:0033043 | 196 | 0.020 | |
| negative regulation of gene expression | GO:0010629 | 387 | 0.020 | |
| establishment of organelle localization | GO:0051656 | 122 | 0.020 | |
| negative regulation of cellular biosynthetic process | GO:0031327 | 277 | 0.020 | |
| nucleocytoplasmic transport | GO:0006913 | 72 | 0.020 | |
| developmental growth | GO:0048589 | 280 | 0.020 | |
| organic substance transport | GO:0071702 | 257 | 0.020 | |
| striated muscle myosin thick filament assembly | GO:0071688 | 3 | 0.020 | |
| ncrna processing | GO:0034470 | 30 | 0.020 | Yeast |
| regulation of gene expression epigenetic | GO:0040029 | 128 | 0.020 | |
| regulation of glial cell proliferation | GO:0060251 | 11 | 0.019 | |
| defense response | GO:0006952 | 300 | 0.019 | |
| skeletal muscle fiber development | GO:0048741 | 3 | 0.019 | |
| cellular protein modification process | GO:0006464 | 438 | 0.019 | |
| regulation of phosphorus metabolic process | GO:0051174 | 210 | 0.018 | |
| regulation of neurogenesis | GO:0050767 | 158 | 0.018 | |
| regulation of cellular localization | GO:0060341 | 136 | 0.018 | |
| regulation of protein ubiquitination | GO:0031396 | 22 | 0.018 | |
| negative regulation of developmental process | GO:0051093 | 201 | 0.018 | |
| positive regulation of developmental growth | GO:0048639 | 62 | 0.018 | |
| response to organic substance | GO:0010033 | 284 | 0.018 | |
| protein import into nucleus | GO:0006606 | 51 | 0.017 | |
| transcription from rna polymerase ii promoter | GO:0006366 | 368 | 0.017 | |
| exocrine system development | GO:0035272 | 162 | 0.017 | |
| mitotic cell cycle phase transition | GO:0044772 | 138 | 0.016 | |
| regulation of mrna splicing via spliceosome | GO:0048024 | 64 | 0.016 | |
| regulation of establishment of protein localization | GO:0070201 | 61 | 0.016 | |
| positive regulation of rna biosynthetic process | GO:1902680 | 266 | 0.016 | |
| regulation of cell size | GO:0008361 | 63 | 0.016 | |
| negative regulation of cell death | GO:0060548 | 81 | 0.016 | |
| response to oxygen containing compound | GO:1901700 | 200 | 0.016 | |
| localization of cell | GO:0051674 | 257 | 0.015 | |
| negative regulation of cellular protein metabolic process | GO:0032269 | 85 | 0.015 | |
| chromosome organization | GO:0051276 | 360 | 0.015 | |
| regulation of nucleocytoplasmic transport | GO:0046822 | 35 | 0.015 | |
| negative regulation of macromolecule biosynthetic process | GO:0010558 | 270 | 0.015 | |
| oocyte construction | GO:0007308 | 112 | 0.015 | |
| nucleoside phosphate metabolic process | GO:0006753 | 162 | 0.015 | |
| protein dna complex subunit organization | GO:0071824 | 86 | 0.015 | |
| dna integrity checkpoint | GO:0031570 | 81 | 0.015 | |
| multi multicellular organism process | GO:0044706 | 123 | 0.015 | |
| chromatin organization | GO:0006325 | 207 | 0.015 | |
| negative regulation of biosynthetic process | GO:0009890 | 277 | 0.015 | |
| negative regulation of mitotic cell cycle | GO:0045930 | 109 | 0.015 | |
| positive regulation of multicellular organism growth | GO:0040018 | 21 | 0.015 | |
| sex differentiation | GO:0007548 | 81 | 0.014 | |
| protein localization | GO:0008104 | 284 | 0.014 | |
| regulation of molecular function | GO:0065009 | 217 | 0.014 | |
| gliogenesis | GO:0042063 | 80 | 0.014 | |
| posttranscriptional gene silencing | GO:0016441 | 46 | 0.014 | |
| organophosphate metabolic process | GO:0019637 | 195 | 0.014 | |
| regionalization | GO:0003002 | 416 | 0.014 | |
| protein targeting | GO:0006605 | 64 | 0.014 | |
| g2 dna damage checkpoint | GO:0031572 | 69 | 0.014 | |
| post embryonic appendage morphogenesis | GO:0035120 | 385 | 0.013 | |
| protein localization to organelle | GO:0033365 | 82 | 0.013 | |
| single organism cellular localization | GO:1902580 | 180 | 0.013 | |
| cellular protein localization | GO:0034613 | 160 | 0.013 | |
| positive regulation of nucleobase containing compound metabolic process | GO:0045935 | 332 | 0.013 | |
| establishment of protein localization | GO:0045184 | 163 | 0.013 | |
| axon development | GO:0061564 | 297 | 0.013 | |
| negative regulation of cell cycle phase transition | GO:1901988 | 103 | 0.013 | |
| single organism catabolic process | GO:0044712 | 228 | 0.013 | |
| regulation of mitotic cell cycle phase transition | GO:1901990 | 130 | 0.013 | |
| death | GO:0016265 | 284 | 0.013 | |
| negative regulation of nitrogen compound metabolic process | GO:0051172 | 265 | 0.013 | |
| positive regulation of nitrogen compound metabolic process | GO:0051173 | 354 | 0.013 | |
| regulation of transport | GO:0051049 | 181 | 0.013 | |
| negative regulation of protein metabolic process | GO:0051248 | 85 | 0.013 | |
| glial cell proliferation | GO:0014009 | 13 | 0.013 | |
| salivary gland histolysis | GO:0035070 | 88 | 0.013 | |
| positive regulation of response to stimulus | GO:0048584 | 323 | 0.013 | |
| alternative mrna splicing via spliceosome | GO:0000380 | 60 | 0.013 | |
| notch signaling pathway | GO:0007219 | 120 | 0.012 | |
| protein targeting to nucleus | GO:0044744 | 51 | 0.012 | |
| nuclear transcribed mrna catabolic process deadenylation dependent decay | GO:0000288 | 14 | 0.012 | |
| negative regulation of cell cycle process | GO:0010948 | 109 | 0.012 | |
| protein complex assembly | GO:0006461 | 200 | 0.012 | |
| posttranscriptional regulation of gene expression | GO:0010608 | 145 | 0.012 | |
| response to hypoxia | GO:0001666 | 53 | 0.012 | |
| positive regulation of transcription dna templated | GO:0045893 | 266 | 0.012 | |
| cellular component assembly involved in morphogenesis | GO:0010927 | 151 | 0.012 | |
| body morphogenesis | GO:0010171 | 2 | 0.012 | |
| response to other organism | GO:0051707 | 293 | 0.012 | |
| regulation of cell cycle phase transition | GO:1901987 | 130 | 0.012 | |
| organonitrogen compound metabolic process | GO:1901564 | 318 | 0.012 | |
| response to endogenous stimulus | GO:0009719 | 119 | 0.011 | |
| organ growth | GO:0035265 | 56 | 0.011 | |
| dna damage checkpoint | GO:0000077 | 78 | 0.011 | |
| microtubule organizing center organization | GO:0031023 | 168 | 0.011 | |
| spindle organization | GO:0007051 | 253 | 0.011 | |
| salivary gland development | GO:0007431 | 162 | 0.011 | |
| negative regulation of programmed cell death | GO:0043069 | 72 | 0.011 | |
| cell proliferation | GO:0008283 | 299 | 0.011 | |
| protein import | GO:0017038 | 55 | 0.011 | |
| cell cycle phase transition | GO:0044770 | 140 | 0.011 | |
| appendage morphogenesis | GO:0035107 | 397 | 0.011 | |
| negative regulation of cell communication | GO:0010648 | 223 | 0.011 | |
| defense response to bacterium | GO:0042742 | 178 | 0.011 | |
| rna splicing via transesterification reactions | GO:0000375 | 73 | 0.011 | |
| oxidation reduction process | GO:0055114 | 123 | 0.011 | |
| cellular response to dna damage stimulus | GO:0006974 | 223 | 0.011 | |
| regulation of mrna metabolic process | GO:1903311 | 72 | 0.011 | |
| positive regulation of binding | GO:0051099 | 4 | 0.011 | |
| regulation of protein modification process | GO:0031399 | 112 | 0.011 | |
| single organism intracellular transport | GO:1902582 | 207 | 0.011 | |
| protein transport | GO:0015031 | 155 | 0.011 | |
| regulation of phosphate metabolic process | GO:0019220 | 210 | 0.010 | |
| response to biotic stimulus | GO:0009607 | 294 | 0.010 | |
| axonogenesis | GO:0007409 | 290 | 0.010 | |
| response to fungus | GO:0009620 | 50 | 0.010 | |
| protein phosphorylation | GO:0006468 | 169 | 0.010 | |
| gastrulation | GO:0007369 | 70 | 0.010 | |