| negative regulation of gene expression | GO:0010629 | 387 | 0.952 | |
| negative regulation of macromolecule biosynthetic process | GO:0010558 | 270 | 0.647 | |
| negative regulation of biosynthetic process | GO:0009890 | 277 | 0.582 | |
| negative regulation of nitrogen compound metabolic process | GO:0051172 | 265 | 0.568 | |
| negative regulation of cellular biosynthetic process | GO:0031327 | 277 | 0.508 | |
| negative regulation of cellular metabolic process | GO:0031324 | 382 | 0.375 | |
| negative regulation of nucleobase containing compound metabolic process | GO:0045934 | 261 | 0.325 | |
| cellular protein modification process | GO:0006464 | 438 | 0.302 | |
| positive regulation of endopeptidase activity | GO:0010950 | 26 | 0.297 | |
| negative regulation of rna biosynthetic process | GO:1902679 | 240 | 0.282 | |
| inter male aggressive behavior | GO:0002121 | 60 | 0.245 | |
| cell cycle checkpoint | GO:0000075 | 95 | 0.219 | |
| translation | GO:0006412 | 69 | 0.215 | |
| posttranscriptional regulation of gene expression | GO:0010608 | 145 | 0.211 | |
| regulation of translation | GO:0006417 | 56 | 0.206 | |
| negative regulation of cellular macromolecule biosynthetic process | GO:2000113 | 267 | 0.204 | |
| regulation of cell cycle phase transition | GO:1901987 | 130 | 0.171 | |
| heterocycle catabolic process | GO:0046700 | 166 | 0.171 | |
| negative regulation of translation | GO:0017148 | 28 | 0.156 | |
| dna integrity checkpoint | GO:0031570 | 81 | 0.146 | |
| regulation of cell cycle | GO:0051726 | 291 | 0.135 | |
| regulation of gene expression epigenetic | GO:0040029 | 128 | 0.128 | |
| mrna metabolic process | GO:0016071 | 124 | 0.128 | |
| meiotic cell cycle | GO:0051321 | 171 | 0.126 | |
| regulation of transcription from rna polymerase ii promoter | GO:0006357 | 378 | 0.122 | |
| nucleobase containing compound catabolic process | GO:0034655 | 165 | 0.108 | |
| positive regulation of gene expression | GO:0010628 | 290 | 0.105 | |
| lipid storage | GO:0019915 | 38 | 0.098 | |
| mitotic cell cycle phase transition | GO:0044772 | 138 | 0.085 | |
| negative regulation of rna metabolic process | GO:0051253 | 251 | 0.084 | |
| regulation of cellular protein metabolic process | GO:0032268 | 243 | 0.082 | |
| ribonucleoprotein complex subunit organization | GO:0071826 | 28 | 0.078 | |
| regulation of catalytic activity | GO:0050790 | 185 | 0.074 | |
| dorsal ventral pattern formation | GO:0009953 | 133 | 0.074 | |
| negative regulation of nucleic acid templated transcription | GO:1903507 | 240 | 0.073 | |
| regulation of protein metabolic process | GO:0051246 | 256 | 0.069 | |
| lipid localization | GO:0010876 | 54 | 0.069 | |
| intracellular signal transduction | GO:0035556 | 300 | 0.069 | |
| meiotic spindle organization | GO:0000212 | 36 | 0.068 | |
| positive regulation of protein metabolic process | GO:0051247 | 128 | 0.065 | |
| compound eye photoreceptor cell differentiation | GO:0001751 | 140 | 0.065 | |
| negative regulation of transcription dna templated | GO:0045892 | 237 | 0.063 | |
| regionalization | GO:0003002 | 416 | 0.062 | |
| positive regulation of peptidase activity | GO:0010952 | 29 | 0.058 | |
| photoreceptor cell differentiation | GO:0046530 | 170 | 0.057 | |
| regulation of nervous system development | GO:0051960 | 248 | 0.056 | |
| cellular macromolecular complex assembly | GO:0034622 | 153 | 0.055 | |
| rna interference | GO:0016246 | 27 | 0.054 | |
| regulation of developmental growth | GO:0048638 | 174 | 0.054 | |
| positive regulation of macromolecule metabolic process | GO:0010604 | 405 | 0.053 | |
| regulation of cell cycle process | GO:0010564 | 181 | 0.050 | |
| regulation of molecular function | GO:0065009 | 217 | 0.049 | |
| stem cell differentiation | GO:0048863 | 117 | 0.048 | |
| positive regulation of molecular function | GO:0044093 | 136 | 0.047 | |
| photoreceptor cell development | GO:0042461 | 96 | 0.047 | |
| protein modification process | GO:0036211 | 438 | 0.046 | |
| gene silencing | GO:0016458 | 138 | 0.046 | |
| regulation of mitotic cell cycle phase transition | GO:1901990 | 130 | 0.046 | |
| regulation of cellular component biogenesis | GO:0044087 | 201 | 0.045 | |
| macromolecular complex assembly | GO:0065003 | 256 | 0.045 | |
| negative regulation of synapse assembly | GO:0051964 | 39 | 0.045 | |
| response to oxygen containing compound | GO:1901700 | 200 | 0.044 | |
| mrna processing | GO:0006397 | 104 | 0.042 | |
| transcription from rna polymerase ii promoter | GO:0006366 | 368 | 0.042 | |
| response to abiotic stimulus | GO:0009628 | 341 | 0.042 | |
| body morphogenesis | GO:0010171 | 2 | 0.041 | |
| protein complex biogenesis | GO:0070271 | 201 | 0.040 | |
| connective tissue development | GO:0061448 | 3 | 0.040 | |
| positive regulation of cellular protein metabolic process | GO:0032270 | 118 | 0.040 | |
| eye morphogenesis | GO:0048592 | 260 | 0.039 | |
| regulation of phosphorus metabolic process | GO:0051174 | 210 | 0.039 | |
| cell cycle phase transition | GO:0044770 | 140 | 0.039 | |
| meiotic cell cycle process | GO:1903046 | 132 | 0.039 | |
| chromosome organization | GO:0051276 | 360 | 0.039 | |
| vesicle mediated transport | GO:0016192 | 381 | 0.038 | |
| response to organic substance | GO:0010033 | 284 | 0.037 | |
| positive regulation of developmental process | GO:0051094 | 143 | 0.036 | |
| carbohydrate derivative catabolic process | GO:1901136 | 118 | 0.036 | |
| aromatic compound catabolic process | GO:0019439 | 166 | 0.036 | |
| transmembrane transport | GO:0055085 | 139 | 0.035 | |
| lipid metabolic process | GO:0006629 | 121 | 0.035 | |
| g1 s transition of mitotic cell cycle | GO:0000082 | 31 | 0.035 | |
| negative regulation of cell cycle phase transition | GO:1901988 | 103 | 0.035 | |
| post embryonic appendage morphogenesis | GO:0035120 | 385 | 0.035 | |
| regulation of cysteine type endopeptidase activity | GO:2000116 | 27 | 0.034 | |
| positive regulation of nucleobase containing compound metabolic process | GO:0045935 | 332 | 0.034 | |
| chromatin organization | GO:0006325 | 207 | 0.033 | |
| catabolic process | GO:0009056 | 409 | 0.033 | |
| aggressive behavior | GO:0002118 | 63 | 0.033 | |
| carbohydrate derivative metabolic process | GO:1901135 | 217 | 0.032 | |
| organelle fission | GO:0048285 | 340 | 0.032 | |
| negative regulation of growth | GO:0045926 | 84 | 0.032 | |
| purine ribonucleotide metabolic process | GO:0009150 | 145 | 0.032 | |
| cell maturation | GO:0048469 | 144 | 0.031 | |
| eye photoreceptor cell development | GO:0042462 | 81 | 0.031 | |
| ribonucleoprotein complex assembly | GO:0022618 | 23 | 0.031 | |
| appendage morphogenesis | GO:0035107 | 397 | 0.031 | |
| small molecule metabolic process | GO:0044281 | 305 | 0.030 | |
| regulation of synapse assembly | GO:0051963 | 94 | 0.029 | |
| regulation of intracellular signal transduction | GO:1902531 | 236 | 0.029 | |
| mrna catabolic process | GO:0006402 | 33 | 0.029 | |
| establishment of localization in cell | GO:0051649 | 402 | 0.029 | |
| protein transmembrane transport | GO:0071806 | 4 | 0.029 | |
| negative regulation of mitotic cell cycle | GO:0045930 | 109 | 0.028 | |
| oocyte construction | GO:0007308 | 112 | 0.028 | |
| stem cell development | GO:0048864 | 79 | 0.028 | |
| single organism intracellular transport | GO:1902582 | 207 | 0.027 | |
| positive regulation of proteolysis | GO:0045862 | 52 | 0.026 | |
| negative regulation of mitotic cell cycle phase transition | GO:1901991 | 103 | 0.026 | |
| protein localization | GO:0008104 | 284 | 0.025 | |
| brain development | GO:0007420 | 120 | 0.025 | |
| positive regulation of hydrolase activity | GO:0051345 | 78 | 0.025 | |
| peptidyl amino acid modification | GO:0018193 | 105 | 0.025 | |
| negative regulation of cell cycle process | GO:0010948 | 109 | 0.024 | |
| positive regulation of catalytic activity | GO:0043085 | 118 | 0.024 | |
| regulation of meiosis | GO:0040020 | 3 | 0.024 | |
| compound eye photoreceptor development | GO:0042051 | 78 | 0.024 | |
| regulation of multicellular organismal development | GO:2000026 | 414 | 0.024 | |
| spermatogenesis | GO:0007283 | 200 | 0.024 | |
| cellular nitrogen compound catabolic process | GO:0044270 | 165 | 0.024 | |
| appendage development | GO:0048736 | 401 | 0.024 | |
| programmed cell death | GO:0012501 | 257 | 0.023 | |
| imaginal disc derived appendage development | GO:0048737 | 399 | 0.023 | |
| negative regulation of cell cycle | GO:0045786 | 116 | 0.023 | |
| stem cell maintenance | GO:0019827 | 67 | 0.023 | |
| gliogenesis | GO:0042063 | 80 | 0.022 | |
| positive regulation of biosynthetic process | GO:0009891 | 316 | 0.022 | |
| regulation of hydrolase activity | GO:0051336 | 97 | 0.022 | |
| gene silencing by rna | GO:0031047 | 57 | 0.022 | |
| chaeta development | GO:0022416 | 97 | 0.022 | |
| eye photoreceptor cell differentiation | GO:0001754 | 145 | 0.022 | |
| membrane disassembly | GO:0030397 | 4 | 0.021 | |
| mitotic dna integrity checkpoint | GO:0044774 | 75 | 0.020 | |
| rhabdomere development | GO:0042052 | 38 | 0.020 | |
| organic substance transport | GO:0071702 | 257 | 0.020 | |
| spindle organization | GO:0007051 | 253 | 0.020 | |
| nitrogen compound transport | GO:0071705 | 85 | 0.020 | |
| regulation of cell differentiation | GO:0045595 | 302 | 0.020 | |
| mitotic cell cycle checkpoint | GO:0007093 | 88 | 0.020 | |
| regulation of mitotic cell cycle | GO:0007346 | 190 | 0.020 | |
| methylation | GO:0032259 | 47 | 0.019 | |
| positive regulation of nucleic acid templated transcription | GO:1903508 | 266 | 0.019 | |
| phosphorylation | GO:0016310 | 294 | 0.019 | |
| microtubule organizing center organization | GO:0031023 | 168 | 0.019 | |
| mesenchymal cell differentiation | GO:0048762 | 1 | 0.019 | |
| sensory organ morphogenesis | GO:0090596 | 260 | 0.019 | |
| lipid biosynthetic process | GO:0008610 | 46 | 0.019 | |
| organelle assembly | GO:0070925 | 198 | 0.019 | |
| organic substance catabolic process | GO:1901575 | 308 | 0.019 | |
| nucleobase containing small molecule metabolic process | GO:0055086 | 174 | 0.019 | |
| endocytosis | GO:0006897 | 310 | 0.019 | |
| organelle localization | GO:0051640 | 148 | 0.018 | |
| sex differentiation | GO:0007548 | 81 | 0.018 | |
| negative regulation of transcription from rna polymerase ii promoter | GO:0000122 | 119 | 0.018 | |
| organonitrogen compound metabolic process | GO:1901564 | 318 | 0.018 | |
| regulation of phosphate metabolic process | GO:0019220 | 210 | 0.018 | |
| oxoacid metabolic process | GO:0043436 | 103 | 0.018 | |
| male gamete generation | GO:0048232 | 201 | 0.017 | |
| regulation of organ morphogenesis | GO:2000027 | 78 | 0.017 | |
| negative regulation of nervous system development | GO:0051961 | 92 | 0.017 | |
| regulation of localization | GO:0032879 | 275 | 0.017 | |
| negative regulation of developmental process | GO:0051093 | 201 | 0.017 | |
| regulation of programmed cell death | GO:0043067 | 152 | 0.017 | |
| nucleotide catabolic process | GO:0009166 | 109 | 0.017 | |
| nuclear transcribed mrna catabolic process | GO:0000956 | 24 | 0.016 | |
| imaginal disc derived wing morphogenesis | GO:0007476 | 337 | 0.016 | |
| gland morphogenesis | GO:0022612 | 145 | 0.016 | |
| rna processing | GO:0006396 | 147 | 0.016 | |
| negative regulation of protein metabolic process | GO:0051248 | 85 | 0.016 | |
| nucleoside triphosphate catabolic process | GO:0009143 | 108 | 0.016 | |
| amine metabolic process | GO:0009308 | 12 | 0.016 | |
| positive regulation of neurogenesis | GO:0050769 | 41 | 0.016 | |
| positive regulation of cellular biosynthetic process | GO:0031328 | 316 | 0.016 | |
| respiratory system development | GO:0060541 | 213 | 0.016 | |
| regulation of synaptic growth at neuromuscular junction | GO:0008582 | 89 | 0.015 | |
| reproductive structure development | GO:0048608 | 74 | 0.015 | |
| response to lipopolysaccharide | GO:0032496 | 4 | 0.015 | |
| gland development | GO:0048732 | 191 | 0.015 | |
| reproductive system development | GO:0061458 | 74 | 0.015 | |
| positive regulation of nervous system development | GO:0051962 | 69 | 0.015 | |
| response to fungus | GO:0009620 | 50 | 0.015 | |
| cell death | GO:0008219 | 279 | 0.015 | |
| nucleoside metabolic process | GO:0009116 | 127 | 0.015 | |
| nucleoside phosphate metabolic process | GO:0006753 | 162 | 0.015 | |
| regulation of embryonic development | GO:0045995 | 68 | 0.015 | |
| purine nucleotide metabolic process | GO:0006163 | 146 | 0.015 | |
| organic cyclic compound catabolic process | GO:1901361 | 168 | 0.015 | |
| developmental growth | GO:0048589 | 280 | 0.014 | |
| positive regulation of translation | GO:0045727 | 12 | 0.014 | |
| maternal determination of anterior posterior axis embryo | GO:0008358 | 74 | 0.014 | |
| regulation of rna splicing | GO:0043484 | 69 | 0.014 | |
| positive regulation of multicellular organismal process | GO:0051240 | 143 | 0.014 | |
| single organism membrane organization | GO:0044802 | 93 | 0.014 | |
| positive regulation of signaling | GO:0023056 | 243 | 0.014 | |
| nuclear division | GO:0000280 | 332 | 0.014 | |
| rna catabolic process | GO:0006401 | 37 | 0.014 | |
| salivary gland morphogenesis | GO:0007435 | 145 | 0.014 | |
| mitotic cell cycle embryonic | GO:0045448 | 38 | 0.014 | |
| regulation of phosphorylation | GO:0042325 | 147 | 0.014 | |
| centrosome organization | GO:0051297 | 163 | 0.014 | |
| positive regulation of cell communication | GO:0010647 | 250 | 0.014 | |
| negative regulation of cellular protein metabolic process | GO:0032269 | 85 | 0.014 | |
| response to bacterium | GO:0009617 | 198 | 0.013 | |
| ribonucleoside triphosphate metabolic process | GO:0009199 | 119 | 0.013 | |
| cellular response to dna damage stimulus | GO:0006974 | 223 | 0.013 | |
| positive regulation of rna biosynthetic process | GO:1902680 | 266 | 0.013 | |
| purine ribonucleoside triphosphate metabolic process | GO:0009205 | 119 | 0.013 | |
| cellular macromolecule catabolic process | GO:0044265 | 136 | 0.013 | |
| nucleotide metabolic process | GO:0009117 | 161 | 0.013 | |
| microtubule cytoskeleton organization involved in mitosis | GO:1902850 | 52 | 0.013 | |
| positive regulation of cellular component organization | GO:0051130 | 156 | 0.013 | |
| mrna splicing via spliceosome | GO:0000398 | 73 | 0.013 | |
| small gtpase mediated signal transduction | GO:0007264 | 88 | 0.013 | |
| cell cycle g1 s phase transition | GO:0044843 | 31 | 0.013 | |
| cellular response to organic substance | GO:0071310 | 132 | 0.013 | |
| regulation of hemocyte proliferation | GO:0035206 | 37 | 0.012 | |
| neuronal stem cell maintenance | GO:0097150 | 4 | 0.012 | |
| forebrain development | GO:0030900 | 2 | 0.012 | |
| cranial nerve development | GO:0021545 | 1 | 0.012 | |
| gonad development | GO:0008406 | 50 | 0.012 | |
| maintenance of location | GO:0051235 | 73 | 0.012 | |
| posttranscriptional gene silencing by rna | GO:0035194 | 45 | 0.012 | |
| rna splicing via transesterification reactions | GO:0000375 | 73 | 0.012 | |
| regulation of cyclin dependent protein serine threonine kinase activity | GO:0000079 | 3 | 0.012 | |
| regulation of anatomical structure size | GO:0090066 | 163 | 0.012 | |
| tor signaling | GO:0031929 | 32 | 0.012 | |
| purine containing compound metabolic process | GO:0072521 | 155 | 0.012 | |
| regulation of transport | GO:0051049 | 181 | 0.012 | |
| organophosphate metabolic process | GO:0019637 | 195 | 0.012 | |
| cell division | GO:0051301 | 248 | 0.012 | |
| nucleocytoplasmic transport | GO:0006913 | 72 | 0.012 | |
| axon development | GO:0061564 | 297 | 0.011 | |
| cellular response to chemical stimulus | GO:0070887 | 199 | 0.011 | |
| response to radiation | GO:0009314 | 155 | 0.011 | |
| cell aging | GO:0007569 | 2 | 0.011 | |
| smoothened signaling pathway | GO:0007224 | 49 | 0.011 | |
| exocrine system development | GO:0035272 | 162 | 0.011 | |
| central nervous system development | GO:0007417 | 201 | 0.011 | |
| regulation of neurogenesis | GO:0050767 | 158 | 0.011 | |
| positive regulation of cell development | GO:0010720 | 61 | 0.011 | |
| regulation of purine nucleotide metabolic process | GO:1900542 | 62 | 0.011 | |
| purine ribonucleoside metabolic process | GO:0046128 | 127 | 0.011 | |
| rna splicing | GO:0008380 | 83 | 0.011 | |
| synapse assembly | GO:0007416 | 143 | 0.011 | |
| positive regulation of macromolecule biosynthetic process | GO:0010557 | 283 | 0.011 | |
| negative regulation of phosphate metabolic process | GO:0045936 | 45 | 0.011 | |
| establishment of protein localization | GO:0045184 | 163 | 0.011 | |
| dosage compensation | GO:0007549 | 16 | 0.011 | |
| nuclear transport | GO:0051169 | 72 | 0.011 | |
| regulation of pole plasm oskar mrna localization | GO:0007317 | 27 | 0.011 | |
| protein transport | GO:0015031 | 155 | 0.011 | |
| larval development | GO:0002164 | 104 | 0.010 | |
| posttranscriptional gene silencing | GO:0016441 | 46 | 0.010 | |
| positive regulation of rna metabolic process | GO:0051254 | 271 | 0.010 | |
| mesenchymal cell development | GO:0014031 | 1 | 0.010 | |
| development of primary sexual characteristics | GO:0045137 | 50 | 0.010 | |
| segmentation | GO:0035282 | 207 | 0.010 | |
| regulation of synapse organization | GO:0050807 | 110 | 0.010 | |
| dna metabolic process | GO:0006259 | 227 | 0.010 | |
| positive regulation of intracellular signal transduction | GO:1902533 | 116 | 0.010 | |
